RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
PTCHD3-202ENST00000622555 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
PTCHD3-202ENST00000622555 A8MUN3 132 aa8.91□□□□□ -0.98
PTCHD3-202ENST00000622555 PSPHP1O15172 72 aa8.91□□□□□ -0.98
PTCHD3-202ENST00000622555 BRK1Q8WUW1 75 aa8.9□□□□□ -0.98
PTCHD3-202ENST00000622555 Q5VV11 94 aa8.89□□□□□ -0.99
PTCHD3-202ENST00000622555 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
PTCHD3-202ENST00000622555 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
PTCHD3-202ENST00000622555 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
PTCHD3-202ENST00000622555 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
PTCHD3-202ENST00000622555 FAT4Q6V0I7 4981 aa8.77□□□□□ -1.01
PTCHD3-202ENST00000622555 S4R3F8 94 aa8.77□□□□□ -1.01
PTCHD3-202ENST00000622555 FLGP20930 4061 aaPredicted RBP8.72□□□□□ -1.01
PTCHD3-202ENST00000622555 LCA10Q71F78 164 aa8.71□□□□□ -1.01
PTCHD3-202ENST00000622555 MT1HP80294 61 aa8.7□□□□□ -1.02
PTCHD3-202ENST00000622555 SEC61GP60059 68 aa8.67□□□□□ -1.02
PTCHD3-202ENST00000622555 M0R2T5 61 aa8.64□□□□□ -1.03
PTCHD3-202ENST00000622555 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
PTCHD3-202ENST00000622555 SPTSSBQ8NFR3 76 aa8.63□□□□□ -1.03
PTCHD3-202ENST00000622555 A0A1B0GU69 56 aa8.62□□□□□ -1.03
PTCHD3-202ENST00000622555 A6NED7 52 aa8.62□□□□□ -1.03
PTCHD3-202ENST00000622555 PMAIP1Q13794 54 aa8.61□□□□□ -1.03
PTCHD3-202ENST00000622555 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
PTCHD3-202ENST00000622555 A8MU10 97 aa8.57□□□□□ -1.04
PTCHD3-202ENST00000622555 CDC42SE1Q9NRR8 79 aa8.57□□□□□ -1.04
PTCHD3-202ENST00000622555 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
PTCHD3-202ENST00000622555 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
PTCHD3-202ENST00000622555 UQCR11O14957 56 aa8.43□□□□□ -1.06
PTCHD3-202ENST00000622555 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
PTCHD3-202ENST00000622555 KTN1-AS1Q86SY8 53 aa8.38□□□□□ -1.07
PTCHD3-202ENST00000622555 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
PTCHD3-202ENST00000622555 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
PTCHD3-202ENST00000622555 H0YAA0 97 aa8.34□□□□□ -1.07
PTCHD3-202ENST00000622555 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
PTCHD3-202ENST00000622555 KRTAP9-8Q9BYQ0 159 aa8.33□□□□□ -1.08
PTCHD3-202ENST00000622555 MT2AP02795 61 aa8.3□□□□□ -1.08
PTCHD3-202ENST00000622555 A0A1B0GU33 70 aa8.29□□□□□ -1.08
PTCHD3-202ENST00000622555 A6NN06 94 aa8.29□□□□□ -1.08
PTCHD3-202ENST00000622555 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
PTCHD3-202ENST00000622555 MT1FP04733 61 aa8.24□□□□□ -1.09
PTCHD3-202ENST00000622555 P0C880 135 aa8.24□□□□□ -1.09
PTCHD3-202ENST00000622555 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
PTCHD3-202ENST00000622555 CRIPTQ9P021 101 aa8.09□□□□□ -1.11
PTCHD3-202ENST00000622555 KRTAP13-4Q3LI77 160 aa8.06□□□□□ -1.12
PTCHD3-202ENST00000622555 R4GN34 69 aa8.06□□□□□ -1.12
PTCHD3-202ENST00000622555 KRTAP9-3Q9BYQ3 159 aa8.05□□□□□ -1.12
PTCHD3-202ENST00000622555 M0QZ58 72 aa8.04□□□□□ -1.12
PTCHD3-202ENST00000622555 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
PTCHD3-202ENST00000622555 SPRR2GQ9BYE4 73 aa7.98□□□□□ -1.13
PTCHD3-202ENST00000622555 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
PTCHD3-202ENST00000622555 K7ERS5 55 aa7.88□□□□□ -1.15
PTCHD3-202ENST00000622555 LCE2DQ5TA82 110 aaPredicted RBP7.87□□□□□ -1.15
PTCHD3-202ENST00000622555 LCE2BO14633 110 aa7.86□□□□□ -1.15
PTCHD3-202ENST00000622555 A0A0D9SG42 100 aa7.86□□□□□ -1.15
PTCHD3-202ENST00000622555 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
PTCHD3-202ENST00000622555 KRTAP19-8Q3LI54 63 aa7.81□□□□□ -1.16
PTCHD3-202ENST00000622555 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
PTCHD3-202ENST00000622555 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
PTCHD3-202ENST00000622555 MT1BP07438 61 aa7.74□□□□□ -1.17
PTCHD3-202ENST00000622555 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
PTCHD3-202ENST00000622555 USH2AO75445 5202 aa7.7□□□□□ -1.18
PTCHD3-202ENST00000622555 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
PTCHD3-202ENST00000622555 ROMO1P60602 79 aa7.67□□□□□ -1.18
PTCHD3-202ENST00000622555 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
PTCHD3-202ENST00000622555 FSIP2Q5CZC0 6907 aa7.54□□□□□ -1.2
PTCHD3-202ENST00000622555 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
PTCHD3-202ENST00000622555 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
PTCHD3-202ENST00000622555 SSPOA2VEC9 5147 aa7.5□□□□□ -1.21
PTCHD3-202ENST00000622555 H3BS24 57 aa7.46□□□□□ -1.22
PTCHD3-202ENST00000622555 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
PTCHD3-202ENST00000622555 MT1XP80297 61 aa7.43□□□□□ -1.22
PTCHD3-202ENST00000622555 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
PTCHD3-202ENST00000622555 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
PTCHD3-202ENST00000622555 PRO2289Q9P1D8 64 aa7.41□□□□□ -1.22
PTCHD3-202ENST00000622555 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
PTCHD3-202ENST00000622555 KRTAP9-6A0A140TA67 174 aa7.23□□□□□ -1.25
PTCHD3-202ENST00000622555 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
PTCHD3-202ENST00000622555 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
PTCHD3-202ENST00000622555 TNP1P09430 55 aa7.1□□□□□ -1.27
PTCHD3-202ENST00000622555 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
PTCHD3-202ENST00000622555 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
PTCHD3-202ENST00000622555 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.29
PTCHD3-202ENST00000622555 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
PTCHD3-202ENST00000622555 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.3
PTCHD3-202ENST00000622555 KMT2DO14686 5537 aa6.87□□□□□ -1.31
PTCHD3-202ENST00000622555 MACF1Q9UPN3 7388 aaKnown RBP6.87□□□□□ -1.31
PTCHD3-202ENST00000622555 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
PTCHD3-202ENST00000622555 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
PTCHD3-202ENST00000622555 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.31
PTCHD3-202ENST00000622555 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
PTCHD3-202ENST00000622555 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
PTCHD3-202ENST00000622555 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
PTCHD3-202ENST00000622555 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
PTCHD3-202ENST00000622555 KRTAP6-3Q3LI67 103 aa6.62□□□□□ -1.35
PTCHD3-202ENST00000622555 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
PTCHD3-202ENST00000622555 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
PTCHD3-202ENST00000622555 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
PTCHD3-202ENST00000622555 KRTAP12-3P60328 96 aa6.59□□□□□ -1.36
PTCHD3-202ENST00000622555 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
PTCHD3-202ENST00000622555 MT1EP04732 61 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms