RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 SEC61GP60059 68 aa11.84□□□□□ -0.51
NKX2-3-202ENST00000622383 KRTAP4-5Q9BYR2 181 aa11.77□□□□□ -0.53
NKX2-3-202ENST00000622383 KTN1-AS1Q86SY8 53 aa11.72□□□□□ -0.53
NKX2-3-202ENST00000622383 BIRC6Q9NR09 4857 aa11.69□□□□□ -0.54
NKX2-3-202ENST00000622383 TPRXLQ17RH7 258 aa11.64□□□□□ -0.55
NKX2-3-202ENST00000622383 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
NKX2-3-202ENST00000622383 H0YAA0 97 aa11.61□□□□□ -0.55
NKX2-3-202ENST00000622383 A0A1B0GU33 70 aa11.6□□□□□ -0.55
NKX2-3-202ENST00000622383 H1FX-AS1Q4G0G2 97 aa11.58□□□□□ -0.56
NKX2-3-202ENST00000622383 ABCA13Q86UQ4 5058 aa11.57□□□□□ -0.56
NKX2-3-202ENST00000622383 LRP2P98164 4655 aa11.57□□□□□ -0.56
NKX2-3-202ENST00000622383 HERC2O95714 4834 aa11.56□□□□□ -0.56
NKX2-3-202ENST00000622383 LPAP08519 4548 aa11.55□□□□□ -0.56
NKX2-3-202ENST00000622383 S4R3F8 94 aa11.52□□□□□ -0.57
NKX2-3-202ENST00000622383 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
NKX2-3-202ENST00000622383 J3QL48 77 aa11.4□□□□□ -0.58
NKX2-3-202ENST00000622383 KRTAP3-2Q9BYR7 98 aa11.39□□□□□ -0.59
NKX2-3-202ENST00000622383 ADM2Q7Z4H4 148 aa11.35□□□□□ -0.59
NKX2-3-202ENST00000622383 RBM12B-AS1Q9P1G2 102 aa11.31□□□□□ -0.6
NKX2-3-202ENST00000622383 PRAC1Q96KF2 57 aa11.3□□□□□ -0.6
NKX2-3-202ENST00000622383 KRTAP13-4Q3LI77 160 aa11.25□□□□□ -0.61
NKX2-3-202ENST00000622383 P0C880 135 aa11.23□□□□□ -0.61
NKX2-3-202ENST00000622383 SEC61BP60468 96 aaKnown RBP11.18□□□□□ -0.62
NKX2-3-202ENST00000622383 PCLOQ9Y6V0 5065 aa11.17□□□□□ -0.62
NKX2-3-202ENST00000622383 CSAG1Q6PB30 78 aa11.16□□□□□ -0.62
NKX2-3-202ENST00000622383 MUC17Q685J3 4493 aa11.13□□□□□ -0.63
NKX2-3-202ENST00000622383 KRTAP4-1Q9BYQ7 146 aa11.09□□□□□ -0.63
NKX2-3-202ENST00000622383 K7ERS5 55 aa11.08□□□□□ -0.64
NKX2-3-202ENST00000622383 A0A0D9SG42 100 aa11.07□□□□□ -0.64
NKX2-3-202ENST00000622383 HERC1Q15751 4861 aa10.93□□□□□ -0.66
NKX2-3-202ENST00000622383 KRTAP19-2Q3LHN2 52 aa10.9□□□□□ -0.66
NKX2-3-202ENST00000622383 M0QZ58 72 aa10.86□□□□□ -0.67
NKX2-3-202ENST00000622383 KRTAP12-2P59991 146 aa10.85□□□□□ -0.67
NKX2-3-202ENST00000622383 ROMO1P60602 79 aa10.83□□□□□ -0.68
NKX2-3-202ENST00000622383 KRTAP12-1P59990 96 aa10.8□□□□□ -0.68
NKX2-3-202ENST00000622383 LINC01554Q52M75 96 aa10.79□□□□□ -0.68
NKX2-3-202ENST00000622383 KRTAP25-1Q3LHN0 102 aa10.79□□□□□ -0.68
NKX2-3-202ENST00000622383 HMCN2Q8NDA2 5059 aa10.74□□□□□ -0.69
NKX2-3-202ENST00000622383 MUC2Q02817 5179 aa10.72□□□□□ -0.69
NKX2-3-202ENST00000622383 SPINT4Q6UDR6 99 aa10.72□□□□□ -0.69
NKX2-3-202ENST00000622383 CRIPTQ9P021 101 aa10.71□□□□□ -0.69
NKX2-3-202ENST00000622383 LORP23490 312 aaPredicted RBP10.65□□□□□ -0.7
NKX2-3-202ENST00000622383 R4GN34 69 aa10.65□□□□□ -0.7
NKX2-3-202ENST00000622383 FLGP20930 4061 aaPredicted RBP10.57□□□□□ -0.72
NKX2-3-202ENST00000622383 C10orf95Q9H7T3 257 aa10.42□□□□□ -0.74
NKX2-3-202ENST00000622383 LCE2CQ5TA81 110 aa10.35□□□□□ -0.75
NKX2-3-202ENST00000622383 UBR4Q5T4S7 5183 aa10.31□□□□□ -0.76
NKX2-3-202ENST00000622383 FAT4Q6V0I7 4981 aa10.22□□□□□ -0.77
NKX2-3-202ENST00000622383 RNF213Q63HN8 5207 aa10.2□□□□□ -0.78
NKX2-3-202ENST00000622383 MT1HP80294 61 aa10.07□□□□□ -0.8
NKX2-3-202ENST00000622383 CAMK2N1Q7Z7J9 78 aa10.05□□□□□ -0.8
NKX2-3-202ENST00000622383 M0R2T5 61 aa9.99□□□□□ -0.81
NKX2-3-202ENST00000622383 SPRR2GQ9BYE4 73 aa9.94□□□□□ -0.82
NKX2-3-202ENST00000622383 KRTAP19-1Q8IUB9 90 aa9.9□□□□□ -0.82
NKX2-3-202ENST00000622383 MT2AP02795 61 aa9.84□□□□□ -0.83
NKX2-3-202ENST00000622383 MT1FP04733 61 aa9.83□□□□□ -0.84
NKX2-3-202ENST00000622383 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
NKX2-3-202ENST00000622383 H3BS24 57 aa9.8□□□□□ -0.84
NKX2-3-202ENST00000622383 KRTAP15-1Q3LI76 137 aa9.77□□□□□ -0.84
NKX2-3-202ENST00000622383 KRTAP10-10P60014 251 aa9.75□□□□□ -0.85
NKX2-3-202ENST00000622383 PP632Q6XCG6 107 aa9.7□□□□□ -0.86
NKX2-3-202ENST00000622383 PLAC4Q8WY50 150 aa9.7□□□□□ -0.86
NKX2-3-202ENST00000622383 TNP1P09430 55 aa9.66□□□□□ -0.86
NKX2-3-202ENST00000622383 KRTAP19-8Q3LI54 63 aa9.55□□□□□ -0.88
NKX2-3-202ENST00000622383 KRTAP23-1A1A580 65 aa9.52□□□□□ -0.89
NKX2-3-202ENST00000622383 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
NKX2-3-202ENST00000622383 MT1BP07438 61 aa9.44□□□□□ -0.9
NKX2-3-202ENST00000622383 KRTAP9-3Q9BYQ3 159 aa9.42□□□□□ -0.9
NKX2-3-202ENST00000622383 NDUFAF8A1L188 74 aa9.33□□□□□ -0.92
NKX2-3-202ENST00000622383 KRTAP10-5P60370 271 aa9.3□□□□□ -0.92
NKX2-3-202ENST00000622383 MT1XP80297 61 aa9.29□□□□□ -0.92
NKX2-3-202ENST00000622383 LCE3AQ5TA76 89 aa9.22□□□□□ -0.93
NKX2-3-202ENST00000622383 LCE2BO14633 110 aa9.08□□□□□ -0.96
NKX2-3-202ENST00000622383 KRTAP8-1Q8IUC2 63 aa9.02□□□□□ -0.97
NKX2-3-202ENST00000622383 KRTAP10-7P60409 375 aaPredicted RBP8.99□□□□□ -0.97
NKX2-3-202ENST00000622383 SPRR5A0A1B0GTR4 108 aa8.97□□□□□ -0.97
NKX2-3-202ENST00000622383 KRTAP10-12P60413 245 aa8.97□□□□□ -0.97
NKX2-3-202ENST00000622383 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
NKX2-3-202ENST00000622383 LUZP6Q538Z0 58 aa8.92□□□□□ -0.98
NKX2-3-202ENST00000622383 USH2AO75445 5202 aa8.85□□□□□ -0.99
NKX2-3-202ENST00000622383 KRTAP12-3P60328 96 aa8.79□□□□□ -1
NKX2-3-202ENST00000622383 KRTAP19-5Q3LI72 72 aa8.55□□□□□ -1.04
NKX2-3-202ENST00000622383 LCE2DQ5TA82 110 aaPredicted RBP8.55□□□□□ -1.04
NKX2-3-202ENST00000622383 KMT2DO14686 5537 aa8.52□□□□□ -1.05
NKX2-3-202ENST00000622383 KRTAP4-8A0A0G2JLE6 195 aa8.5□□□□□ -1.05
NKX2-3-202ENST00000622383 KRTAP4-8Q9BYQ9 185 aa8.5□□□□□ -1.05
NKX2-3-202ENST00000622383 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
NKX2-3-202ENST00000622383 SSPOA2VEC9 5147 aa8.41□□□□□ -1.06
NKX2-3-202ENST00000622383 KRTAP19-6Q3LI70 58 aa8.32□□□□□ -1.08
NKX2-3-202ENST00000622383 KRTAP19-7Q3SYF9 63 aa8.29□□□□□ -1.08
NKX2-3-202ENST00000622383 LCE3CQ5T5A8 94 aa8.27□□□□□ -1.09
NKX2-3-202ENST00000622383 KRTAP9-2Q9BYQ4 174 aa8.25□□□□□ -1.09
NKX2-3-202ENST00000622383 A0A0A0MQY5 61 aa8.21□□□□□ -1.09
NKX2-3-202ENST00000622383 MT1EP04732 61 aa8.07□□□□□ -1.12
NKX2-3-202ENST00000622383 FCGBPQ9Y6R7 5405 aaPredicted RBP8.04□□□□□ -1.12
NKX2-3-202ENST00000622383 MT1LQ93083 61 aa8.01□□□□□ -1.13
NKX2-3-202ENST00000622383 KRTAP4-7Q9BYR0 210 aa7.98□□□□□ -1.13
NKX2-3-202ENST00000622383 KRTAP9-6A8MVA2 160 aa7.97□□□□□ -1.13
NKX2-3-202ENST00000622383 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.14
NKX2-3-202ENST00000622383 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms