RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 S4R3F8 94 aa9.97□□□□□ -0.81
PMPCA-212ENST00000622209 MT-ATP8P03928 68 aa9.95□□□□□ -0.82
PMPCA-212ENST00000622209 KRTAP19-6Q3LI70 58 aa9.95□□□□□ -0.82
PMPCA-212ENST00000622209 H3BPC8 53 aa9.9□□□□□ -0.82
PMPCA-212ENST00000622209 LCA10Q71F78 164 aa9.9□□□□□ -0.82
PMPCA-212ENST00000622209 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
PMPCA-212ENST00000622209 KLKP1Q107X0 134 aa9.86□□□□□ -0.83
PMPCA-212ENST00000622209 A8MUN3 132 aa9.82□□□□□ -0.84
PMPCA-212ENST00000622209 SMIM20Q8N5G0 67 aa9.81□□□□□ -0.84
PMPCA-212ENST00000622209 FAM236AA0A1B0GUQ0 79 aa9.79□□□□□ -0.84
PMPCA-212ENST00000622209 FAM236BA0A1B0GV22 79 aa9.79□□□□□ -0.84
PMPCA-212ENST00000622209 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
PMPCA-212ENST00000622209 TRAV7A0A075B6U4 112 aa9.76□□□□□ -0.85
PMPCA-212ENST00000622209 NDUFC1O43677 76 aa9.69□□□□□ -0.86
PMPCA-212ENST00000622209 KRTAP6-3Q3LI67 103 aa9.65□□□□□ -0.86
PMPCA-212ENST00000622209 DMAC1Q96GE9 116 aa9.61□□□□□ -0.87
PMPCA-212ENST00000622209 NEBP20929 6669 aa9.54□□□□□ -0.88
PMPCA-212ENST00000622209 H0YAA0 97 aa9.54□□□□□ -0.88
PMPCA-212ENST00000622209 SERP2Q8N6R1 65 aa9.53□□□□□ -0.88
PMPCA-212ENST00000622209 SNURFQ9Y675 71 aa9.49□□□□□ -0.89
PMPCA-212ENST00000622209 SPRR2GQ9BYE4 73 aa9.48□□□□□ -0.89
PMPCA-212ENST00000622209 CRIPTQ9P021 101 aa9.48□□□□□ -0.89
PMPCA-212ENST00000622209 ACYP2P14621 99 aa9.47□□□□□ -0.89
PMPCA-212ENST00000622209 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
PMPCA-212ENST00000622209 A6NN06 94 aa9.44□□□□□ -0.9
PMPCA-212ENST00000622209 MT1BP07438 61 aa9.42□□□□□ -0.9
PMPCA-212ENST00000622209 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
PMPCA-212ENST00000622209 Q5VV11 94 aa9.4□□□□□ -0.9
PMPCA-212ENST00000622209 KRTAP19-8Q3LI54 63 aa9.38□□□□□ -0.91
PMPCA-212ENST00000622209 SPANXA2-OT1Q8N9U9 137 aa9.38□□□□□ -0.91
PMPCA-212ENST00000622209 MUC12Q9UKN1 5478 aa9.38□□□□□ -0.91
PMPCA-212ENST00000622209 COX7CP15954 63 aa9.32□□□□□ -0.92
PMPCA-212ENST00000622209 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
PMPCA-212ENST00000622209 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
PMPCA-212ENST00000622209 KRTAP10-5P60370 271 aa9.25□□□□□ -0.93
PMPCA-212ENST00000622209 P0C880 135 aa9.22□□□□□ -0.93
PMPCA-212ENST00000622209 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.94
PMPCA-212ENST00000622209 R4GN34 69 aa9.16□□□□□ -0.94
PMPCA-212ENST00000622209 MDN1Q9NU22 5596 aa9.15□□□□□ -0.94
PMPCA-212ENST00000622209 ANAPC13Q9BS18 74 aa9.13□□□□□ -0.95
PMPCA-212ENST00000622209 KMT2DO14686 5537 aa9.13□□□□□ -0.95
PMPCA-212ENST00000622209 H7BZZ5 65 aa9.1□□□□□ -0.95
PMPCA-212ENST00000622209 M0QZ58 72 aa9.08□□□□□ -0.96
PMPCA-212ENST00000622209 KRTAP20-1Q3LI63 56 aa9.08□□□□□ -0.96
PMPCA-212ENST00000622209 KRTAP5-9P26371 169 aa9.07□□□□□ -0.96
PMPCA-212ENST00000622209 CYSTM1Q9H1C7 97 aa9.07□□□□□ -0.96
PMPCA-212ENST00000622209 COA5Q86WW8 74 aa9.06□□□□□ -0.96
PMPCA-212ENST00000622209 PLAC4Q8WY50 150 aa8.98□□□□□ -0.97
PMPCA-212ENST00000622209 CCDC179H3BU77 68 aa8.92□□□□□ -0.98
PMPCA-212ENST00000622209 LINC01554Q52M75 96 aa8.92□□□□□ -0.98
PMPCA-212ENST00000622209 PRO2289Q9P1D8 64 aa8.86□□□□□ -0.99
PMPCA-212ENST00000622209 SEC61GP60059 68 aa8.84□□□□□ -0.99
PMPCA-212ENST00000622209 MT1XP80297 61 aa8.8□□□□□ -1
PMPCA-212ENST00000622209 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
PMPCA-212ENST00000622209 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
PMPCA-212ENST00000622209 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
PMPCA-212ENST00000622209 KRTAP2-3P0C7H8 128 aa8.77□□□□□ -1.01
PMPCA-212ENST00000622209 KRTAP2-4Q9BYR9 128 aa8.77□□□□□ -1.01
PMPCA-212ENST00000622209 SPRR2EP22531 72 aa8.73□□□□□ -1.01
PMPCA-212ENST00000622209 SPRR2BP35325 72 aa8.73□□□□□ -1.01
PMPCA-212ENST00000622209 SPRR2AP35326 72 aa8.73□□□□□ -1.01
PMPCA-212ENST00000622209 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
PMPCA-212ENST00000622209 KRTAP8-1Q8IUC2 63 aa8.67□□□□□ -1.02
PMPCA-212ENST00000622209 TMEM258P61165 79 aa8.64□□□□□ -1.03
PMPCA-212ENST00000622209 A0A1B0GU33 70 aa8.63□□□□□ -1.03
PMPCA-212ENST00000622209 A0A1B0GU69 56 aa8.61□□□□□ -1.03
PMPCA-212ENST00000622209 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
PMPCA-212ENST00000622209 LCE1AQ5T7P2 110 aa8.56□□□□□ -1.04
PMPCA-212ENST00000622209 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
PMPCA-212ENST00000622209 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.05
PMPCA-212ENST00000622209 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
PMPCA-212ENST00000622209 A0A0D9SG42 100 aa8.49□□□□□ -1.05
PMPCA-212ENST00000622209 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
PMPCA-212ENST00000622209 KRTAP2-2Q9BYT5 123 aa8.47□□□□□ -1.05
PMPCA-212ENST00000622209 KRTAP2-1Q9BYU5 128 aa8.47□□□□□ -1.05
PMPCA-212ENST00000622209 PRR15LQ9BU68 103 aa8.46□□□□□ -1.06
PMPCA-212ENST00000622209 SPRR2DP22532 72 aa8.44□□□□□ -1.06
PMPCA-212ENST00000622209 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
PMPCA-212ENST00000622209 SMIM26A0A096LP01 95 aa8.41□□□□□ -1.06
PMPCA-212ENST00000622209 KRTAP10-7P60409 375 aaPredicted RBP8.39□□□□□ -1.07
PMPCA-212ENST00000622209 KRTAP10-12P60413 245 aa8.38□□□□□ -1.07
PMPCA-212ENST00000622209 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
PMPCA-212ENST00000622209 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
PMPCA-212ENST00000622209 A8MU10 97 aa8.28□□□□□ -1.08
PMPCA-212ENST00000622209 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
PMPCA-212ENST00000622209 UQCR11O14957 56 aa8.18□□□□□ -1.1
PMPCA-212ENST00000622209 V9GYY9 64 aa8.16□□□□□ -1.1
PMPCA-212ENST00000622209 PCP4P48539 62 aa8.1□□□□□ -1.11
PMPCA-212ENST00000622209 Q1T7F1 81 aa8.09□□□□□ -1.11
PMPCA-212ENST00000622209 GPR98Q8WXG9 6306 aa8.01□□□□□ -1.13
PMPCA-212ENST00000622209 MIR22HGQ0VDD5 57 aa8.01□□□□□ -1.13
PMPCA-212ENST00000622209 PSPHP1O15172 72 aa8□□□□□ -1.13
PMPCA-212ENST00000622209 DSTQ03001 7570 aaKnown RBP7.98□□□□□ -1.13
PMPCA-212ENST00000622209 RPS28P62857 69 aaKnown RBP7.96□□□□□ -1.14
PMPCA-212ENST00000622209 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
PMPCA-212ENST00000622209 TNP1P09430 55 aa7.9□□□□□ -1.14
PMPCA-212ENST00000622209 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
PMPCA-212ENST00000622209 K7ERS5 55 aa7.83□□□□□ -1.16
PMPCA-212ENST00000622209 LCE5AQ5TCM9 118 aa7.82□□□□□ -1.16
PMPCA-212ENST00000622209 MT1EP04732 61 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 607.8 ms