RNA–Protein interactions for RNA: ENST00000621936.1

PCCA-210, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

Gene PCCA, Length 1,850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-210ENST00000621936 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
PCCA-210ENST00000621936 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
PCCA-210ENST00000621936 A0A1B0GU33 70 aa6.11□□□□□ -1.43
PCCA-210ENST00000621936 TNXBP22105 4242 aa6.11□□□□□ -1.43
PCCA-210ENST00000621936 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
PCCA-210ENST00000621936 KMT2CQ8NEZ4 4911 aaKnown RBP6.1□□□□□ -1.43
PCCA-210ENST00000621936 HSPG2P98160 4391 aa6.08□□□□□ -1.44
PCCA-210ENST00000621936 H0YAA0 97 aa6.07□□□□□ -1.44
PCCA-210ENST00000621936 XP32Q5T750 250 aa6.07□□□□□ -1.44
PCCA-210ENST00000621936 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
PCCA-210ENST00000621936 RYR1P21817 5038 aa6.02□□□□□ -1.45
PCCA-210ENST00000621936 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
PCCA-210ENST00000621936 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
PCCA-210ENST00000621936 S4R3F8 94 aa5.97□□□□□ -1.45
PCCA-210ENST00000621936 LRP1Q07954 4544 aaKnown RBP5.97□□□□□ -1.45
PCCA-210ENST00000621936 K7ERS5 55 aa5.96□□□□□ -1.45
PCCA-210ENST00000621936 TPRXLQ17RH7 258 aa5.96□□□□□ -1.46
PCCA-210ENST00000621936 ADM2Q7Z4H4 148 aa5.96□□□□□ -1.46
PCCA-210ENST00000621936 KRTAP10-6P60371 365 aaPredicted RBP5.94□□□□□ -1.46
PCCA-210ENST00000621936 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
PCCA-210ENST00000621936 RYR3Q15413 4870 aa5.93□□□□□ -1.46
PCCA-210ENST00000621936 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
PCCA-210ENST00000621936 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
PCCA-210ENST00000621936 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.47
PCCA-210ENST00000621936 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
PCCA-210ENST00000621936 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
PCCA-210ENST00000621936 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
PCCA-210ENST00000621936 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
PCCA-210ENST00000621936 ROMO1P60602 79 aa5.78□□□□□ -1.48
PCCA-210ENST00000621936 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
PCCA-210ENST00000621936 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
PCCA-210ENST00000621936 SEC61BP60468 96 aaKnown RBP5.77□□□□□ -1.49
PCCA-210ENST00000621936 P0C880 135 aa5.76□□□□□ -1.49
PCCA-210ENST00000621936 M0QZ58 72 aa5.75□□□□□ -1.49
PCCA-210ENST00000621936 A0A0A0MQY5 61 aa5.74□□□□□ -1.49
PCCA-210ENST00000621936 EPPK1P58107 5090 aaKnown RBP5.71□□□□□ -1.5
PCCA-210ENST00000621936 A0A0D9SG42 100 aa5.69□□□□□ -1.5
PCCA-210ENST00000621936 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
PCCA-210ENST00000621936 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
PCCA-210ENST00000621936 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
PCCA-210ENST00000621936 LRP2P98164 4655 aa5.63□□□□□ -1.51
PCCA-210ENST00000621936 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
PCCA-210ENST00000621936 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
PCCA-210ENST00000621936 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
PCCA-210ENST00000621936 LPAP08519 4548 aa5.54□□□□□ -1.52
PCCA-210ENST00000621936 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
PCCA-210ENST00000621936 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
PCCA-210ENST00000621936 KRTAP4-1Q9BYQ7 146 aa5.52□□□□□ -1.53
PCCA-210ENST00000621936 R4GN34 69 aa5.51□□□□□ -1.53
PCCA-210ENST00000621936 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
PCCA-210ENST00000621936 KRTAP19-2Q3LHN2 52 aa5.49□□□□□ -1.53
PCCA-210ENST00000621936 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
PCCA-210ENST00000621936 HERC2O95714 4834 aa5.48□□□□□ -1.53
PCCA-210ENST00000621936 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
PCCA-210ENST00000621936 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
PCCA-210ENST00000621936 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.55
PCCA-210ENST00000621936 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
PCCA-210ENST00000621936 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
PCCA-210ENST00000621936 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
PCCA-210ENST00000621936 FLGP20930 4061 aaPredicted RBP5.28□□□□□ -1.56
PCCA-210ENST00000621936 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
PCCA-210ENST00000621936 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
PCCA-210ENST00000621936 HERC1Q15751 4861 aa5.25□□□□□ -1.57
PCCA-210ENST00000621936 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
PCCA-210ENST00000621936 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
PCCA-210ENST00000621936 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
PCCA-210ENST00000621936 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
PCCA-210ENST00000621936 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
PCCA-210ENST00000621936 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
PCCA-210ENST00000621936 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
PCCA-210ENST00000621936 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
PCCA-210ENST00000621936 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
PCCA-210ENST00000621936 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.6
PCCA-210ENST00000621936 M0R2T5 61 aa5.08□□□□□ -1.6
PCCA-210ENST00000621936 TNP1P09430 55 aa5.08□□□□□ -1.6
PCCA-210ENST00000621936 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
PCCA-210ENST00000621936 MT1HP80294 61 aa5.07□□□□□ -1.6
PCCA-210ENST00000621936 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
PCCA-210ENST00000621936 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
PCCA-210ENST00000621936 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
PCCA-210ENST00000621936 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
PCCA-210ENST00000621936 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
PCCA-210ENST00000621936 MUC2Q02817 5179 aa5□□□□□ -1.61
PCCA-210ENST00000621936 MT2AP02795 61 aa4.95□□□□□ -1.62
PCCA-210ENST00000621936 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
PCCA-210ENST00000621936 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
PCCA-210ENST00000621936 MT1FP04733 61 aa4.92□□□□□ -1.62
PCCA-210ENST00000621936 RNF213Q63HN8 5207 aa4.9□□□□□ -1.62
PCCA-210ENST00000621936 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
PCCA-210ENST00000621936 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
PCCA-210ENST00000621936 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
PCCA-210ENST00000621936 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
PCCA-210ENST00000621936 MT1BP07438 61 aa4.77□□□□□ -1.65
PCCA-210ENST00000621936 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
PCCA-210ENST00000621936 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
PCCA-210ENST00000621936 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
PCCA-210ENST00000621936 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
PCCA-210ENST00000621936 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
PCCA-210ENST00000621936 MT1XP80297 61 aa4.71□□□□□ -1.66
PCCA-210ENST00000621936 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms