RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 MDN1Q9NU22 5596 aa7.17□□□□□ -1.26
SNHG28-203ENST00000621242 KMT2DO14686 5537 aa7.16□□□□□ -1.26
SNHG28-203ENST00000621242 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
SNHG28-203ENST00000621242 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.26
SNHG28-203ENST00000621242 LOC101927531A0A1B0GV80 90 aa7.14□□□□□ -1.27
SNHG28-203ENST00000621242 C4orf26Q17RF5 130 aa7.14□□□□□ -1.27
SNHG28-203ENST00000621242 ATOX1O00244 68 aa7.13□□□□□ -1.27
SNHG28-203ENST00000621242 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
SNHG28-203ENST00000621242 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
SNHG28-203ENST00000621242 C1orf64Q8NEQ6 169 aa7.11□□□□□ -1.27
SNHG28-203ENST00000621242 MT1BP07438 61 aa7.1□□□□□ -1.27
SNHG28-203ENST00000621242 MP68P56378 58 aa7.1□□□□□ -1.27
SNHG28-203ENST00000621242 C5orf47Q569G3 176 aa7.09□□□□□ -1.27
SNHG28-203ENST00000621242 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
SNHG28-203ENST00000621242 KLKP1Q107X0 134 aa7.07□□□□□ -1.28
SNHG28-203ENST00000621242 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
SNHG28-203ENST00000621242 SMIM20Q8N5G0 67 aa7.05□□□□□ -1.28
SNHG28-203ENST00000621242 Q5VV11 94 aa7.04□□□□□ -1.28
SNHG28-203ENST00000621242 H3BPC8 53 aa7.03□□□□□ -1.28
SNHG28-203ENST00000621242 H3BS24 57 aa7.03□□□□□ -1.28
SNHG28-203ENST00000621242 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
SNHG28-203ENST00000621242 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
SNHG28-203ENST00000621242 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
SNHG28-203ENST00000621242 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
SNHG28-203ENST00000621242 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
SNHG28-203ENST00000621242 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
SNHG28-203ENST00000621242 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
SNHG28-203ENST00000621242 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
SNHG28-203ENST00000621242 S4R3F8 94 aa6.9□□□□□ -1.3
SNHG28-203ENST00000621242 COX7CP15954 63 aa6.89□□□□□ -1.31
SNHG28-203ENST00000621242 LCA10Q71F78 164 aa6.88□□□□□ -1.31
SNHG28-203ENST00000621242 ANAPC13Q9BS18 74 aa6.85□□□□□ -1.31
SNHG28-203ENST00000621242 A8MUN3 132 aa6.84□□□□□ -1.31
SNHG28-203ENST00000621242 SPRR2EP22531 72 aa6.83□□□□□ -1.32
SNHG28-203ENST00000621242 SPRR2BP35325 72 aa6.83□□□□□ -1.32
SNHG28-203ENST00000621242 SPRR2AP35326 72 aa6.83□□□□□ -1.32
SNHG28-203ENST00000621242 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
SNHG28-203ENST00000621242 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
SNHG28-203ENST00000621242 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
SNHG28-203ENST00000621242 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
SNHG28-203ENST00000621242 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
SNHG28-203ENST00000621242 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
SNHG28-203ENST00000621242 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
SNHG28-203ENST00000621242 SPANXA2-OT1Q8N9U9 137 aa6.73□□□□□ -1.33
SNHG28-203ENST00000621242 H7BZZ5 65 aa6.71□□□□□ -1.34
SNHG28-203ENST00000621242 NDUFC1O43677 76 aa6.71□□□□□ -1.34
SNHG28-203ENST00000621242 ACYP2P14621 99 aa6.7□□□□□ -1.34
SNHG28-203ENST00000621242 LCE1AQ5T7P2 110 aa6.67□□□□□ -1.34
SNHG28-203ENST00000621242 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
SNHG28-203ENST00000621242 CRIPTQ9P021 101 aa6.62□□□□□ -1.35
SNHG28-203ENST00000621242 SPRR2DP22532 72 aa6.61□□□□□ -1.35
SNHG28-203ENST00000621242 CHKB-CPT1BH3BT56 60 aa6.59□□□□□ -1.35
SNHG28-203ENST00000621242 COA5Q86WW8 74 aa6.57□□□□□ -1.36
SNHG28-203ENST00000621242 H0YAA0 97 aa6.55□□□□□ -1.36
SNHG28-203ENST00000621242 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
SNHG28-203ENST00000621242 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
SNHG28-203ENST00000621242 MT1XP80297 61 aa6.53□□□□□ -1.36
SNHG28-203ENST00000621242 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
SNHG28-203ENST00000621242 P0C880 135 aa6.49□□□□□ -1.37
SNHG28-203ENST00000621242 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
SNHG28-203ENST00000621242 GPR98Q8WXG9 6306 aa6.45□□□□□ -1.38
SNHG28-203ENST00000621242 ATP5EP56381 51 aaPredicted RBP6.45□□□□□ -1.38
SNHG28-203ENST00000621242 TMEM258P61165 79 aa6.45□□□□□ -1.38
SNHG28-203ENST00000621242 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
SNHG28-203ENST00000621242 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
SNHG28-203ENST00000621242 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
SNHG28-203ENST00000621242 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
SNHG28-203ENST00000621242 PCP4P48539 62 aa6.38□□□□□ -1.39
SNHG28-203ENST00000621242 M0QZ58 72 aa6.32□□□□□ -1.4
SNHG28-203ENST00000621242 R4GN34 69 aa6.31□□□□□ -1.4
SNHG28-203ENST00000621242 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
SNHG28-203ENST00000621242 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
SNHG28-203ENST00000621242 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
SNHG28-203ENST00000621242 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
SNHG28-203ENST00000621242 SEC61GP60059 68 aa6.22□□□□□ -1.41
SNHG28-203ENST00000621242 LINC01554Q52M75 96 aa6.22□□□□□ -1.41
SNHG28-203ENST00000621242 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
SNHG28-203ENST00000621242 A0A1B0GU69 56 aa6.19□□□□□ -1.42
SNHG28-203ENST00000621242 KRTAP10-12P60413 245 aa6.19□□□□□ -1.42
SNHG28-203ENST00000621242 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
SNHG28-203ENST00000621242 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
SNHG28-203ENST00000621242 A0A1B0GU33 70 aa6.13□□□□□ -1.43
SNHG28-203ENST00000621242 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
SNHG28-203ENST00000621242 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
SNHG28-203ENST00000621242 A0A0D9SG42 100 aa6.06□□□□□ -1.44
SNHG28-203ENST00000621242 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
SNHG28-203ENST00000621242 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
SNHG28-203ENST00000621242 Q1T7F1 81 aa5.99□□□□□ -1.45
SNHG28-203ENST00000621242 A8MU10 97 aa5.98□□□□□ -1.45
SNHG28-203ENST00000621242 PSPHP1O15172 72 aa5.97□□□□□ -1.45
SNHG28-203ENST00000621242 V9GYY9 64 aa5.97□□□□□ -1.45
SNHG28-203ENST00000621242 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
SNHG28-203ENST00000621242 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
SNHG28-203ENST00000621242 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SNHG28-203ENST00000621242 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
SNHG28-203ENST00000621242 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
SNHG28-203ENST00000621242 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
SNHG28-203ENST00000621242 SPINT4Q6UDR6 99 aa5.92□□□□□ -1.46
SNHG28-203ENST00000621242 UQCR11O14957 56 aa5.9□□□□□ -1.46
SNHG28-203ENST00000621242 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms