RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
PTPDC1-204ENST00000620992 ROMO1P60602 79 aa4.4□□□□□ -1.7
PTPDC1-204ENST00000620992 XP32Q5T750 250 aa4.4□□□□□ -1.7
PTPDC1-204ENST00000620992 FAT1Q14517 4588 aa4.37□□□□□ -1.71
PTPDC1-204ENST00000620992 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
PTPDC1-204ENST00000620992 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
PTPDC1-204ENST00000620992 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
PTPDC1-204ENST00000620992 H0YAA0 97 aa4.32□□□□□ -1.72
PTPDC1-204ENST00000620992 DYNC1H1Q14204 4646 aaKnown RBP4.31□□□□□ -1.72
PTPDC1-204ENST00000620992 SACSQ9NZJ4 4579 aa4.29□□□□□ -1.72
PTPDC1-204ENST00000620992 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
PTPDC1-204ENST00000620992 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
PTPDC1-204ENST00000620992 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
PTPDC1-204ENST00000620992 P0C880 135 aa4.23□□□□□ -1.73
PTPDC1-204ENST00000620992 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
PTPDC1-204ENST00000620992 TNP1P09430 55 aa4.22□□□□□ -1.73
PTPDC1-204ENST00000620992 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
PTPDC1-204ENST00000620992 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.73
PTPDC1-204ENST00000620992 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
PTPDC1-204ENST00000620992 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
PTPDC1-204ENST00000620992 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
PTPDC1-204ENST00000620992 PKHD1L1Q86WI1 4243 aa4.16□□□□□ -1.74
PTPDC1-204ENST00000620992 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
PTPDC1-204ENST00000620992 KRTAP3-3Q9BYR6 98 aa4.12□□□□□ -1.75
PTPDC1-204ENST00000620992 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
PTPDC1-204ENST00000620992 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
PTPDC1-204ENST00000620992 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
PTPDC1-204ENST00000620992 FAT3Q8TDW7 4589 aa4.11□□□□□ -1.75
PTPDC1-204ENST00000620992 HSPG2P98160 4391 aa4.1□□□□□ -1.75
PTPDC1-204ENST00000620992 RYR2Q92736 4967 aa4.1□□□□□ -1.75
PTPDC1-204ENST00000620992 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
PTPDC1-204ENST00000620992 TNXBP22105 4242 aa4.06□□□□□ -1.76
PTPDC1-204ENST00000620992 RYR3Q15413 4870 aa4.02□□□□□ -1.77
PTPDC1-204ENST00000620992 KRTAP17-1Q9BYP8 105 aa4.02□□□□□ -1.77
PTPDC1-204ENST00000620992 KIAA1109Q2LD37 5005 aa4.01□□□□□ -1.77
PTPDC1-204ENST00000620992 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
PTPDC1-204ENST00000620992 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
PTPDC1-204ENST00000620992 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
PTPDC1-204ENST00000620992 LRP2P98164 4655 aa3.98□□□□□ -1.77
PTPDC1-204ENST00000620992 LPAP08519 4548 aa3.97□□□□□ -1.77
PTPDC1-204ENST00000620992 RYR1P21817 5038 aa3.97□□□□□ -1.77
PTPDC1-204ENST00000620992 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
PTPDC1-204ENST00000620992 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
PTPDC1-204ENST00000620992 ABCA13Q86UQ4 5058 aa3.84□□□□□ -1.8
PTPDC1-204ENST00000620992 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
PTPDC1-204ENST00000620992 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
PTPDC1-204ENST00000620992 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
PTPDC1-204ENST00000620992 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
PTPDC1-204ENST00000620992 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
PTPDC1-204ENST00000620992 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
PTPDC1-204ENST00000620992 MUC2Q02817 5179 aa3.69□□□□□ -1.82
PTPDC1-204ENST00000620992 MUC17Q685J3 4493 aa3.67□□□□□ -1.82
PTPDC1-204ENST00000620992 HERC2O95714 4834 aa3.67□□□□□ -1.82
PTPDC1-204ENST00000620992 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.82
PTPDC1-204ENST00000620992 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
PTPDC1-204ENST00000620992 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
PTPDC1-204ENST00000620992 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
PTPDC1-204ENST00000620992 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
PTPDC1-204ENST00000620992 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
PTPDC1-204ENST00000620992 HERC1Q15751 4861 aa3.51□□□□□ -1.85
PTPDC1-204ENST00000620992 FAT4Q6V0I7 4981 aa3.5□□□□□ -1.85
PTPDC1-204ENST00000620992 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
PTPDC1-204ENST00000620992 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
PTPDC1-204ENST00000620992 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
PTPDC1-204ENST00000620992 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
PTPDC1-204ENST00000620992 MT1HP80294 61 aa3.42□□□□□ -1.86
PTPDC1-204ENST00000620992 LCE2CQ5TA81 110 aa3.41□□□□□ -1.86
PTPDC1-204ENST00000620992 RNF213Q63HN8 5207 aa3.4□□□□□ -1.86
PTPDC1-204ENST00000620992 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
PTPDC1-204ENST00000620992 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
PTPDC1-204ENST00000620992 MT2AP02795 61 aa3.38□□□□□ -1.87
PTPDC1-204ENST00000620992 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
PTPDC1-204ENST00000620992 UBR4Q5T4S7 5183 aa3.37□□□□□ -1.87
PTPDC1-204ENST00000620992 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
PTPDC1-204ENST00000620992 MT1FP04733 61 aa3.35□□□□□ -1.87
PTPDC1-204ENST00000620992 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
PTPDC1-204ENST00000620992 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
PTPDC1-204ENST00000620992 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
PTPDC1-204ENST00000620992 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
PTPDC1-204ENST00000620992 INE1O15225 51 aa3.26□□□□□ -1.89
PTPDC1-204ENST00000620992 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
PTPDC1-204ENST00000620992 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
PTPDC1-204ENST00000620992 MT1BP07438 61 aa3.2□□□□□ -1.9
PTPDC1-204ENST00000620992 MT1XP80297 61 aa3.2□□□□□ -1.9
PTPDC1-204ENST00000620992 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
PTPDC1-204ENST00000620992 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
PTPDC1-204ENST00000620992 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
PTPDC1-204ENST00000620992 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
PTPDC1-204ENST00000620992 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
PTPDC1-204ENST00000620992 KRTAP4-8Q9BYQ9 185 aa3.1□□□□□ -1.91
PTPDC1-204ENST00000620992 USH2AO75445 5202 aa3.07□□□□□ -1.92
PTPDC1-204ENST00000620992 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
PTPDC1-204ENST00000620992 KMT2DO14686 5537 aa3.04□□□□□ -1.92
PTPDC1-204ENST00000620992 SPRR2EP22531 72 aa3.04□□□□□ -1.92
PTPDC1-204ENST00000620992 SPRR2BP35325 72 aa3.04□□□□□ -1.92
PTPDC1-204ENST00000620992 SPRR2AP35326 72 aa3.04□□□□□ -1.92
PTPDC1-204ENST00000620992 LCE2BO14633 110 aa3.02□□□□□ -1.93
PTPDC1-204ENST00000620992 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
PTPDC1-204ENST00000620992 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
PTPDC1-204ENST00000620992 MT1GP13640 62 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms