RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 Q6ZSA8 131 aa3.15□□□□□ -1.91
CPNE4-214ENST00000617767 FAM229AH3BQW9 127 aa3.14□□□□□ -1.91
CPNE4-214ENST00000617767 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
CPNE4-214ENST00000617767 A0A1B0GVX0 72 aa3.13□□□□□ -1.91
CPNE4-214ENST00000617767 TYMSOSQ8TAI1 123 aa3.13□□□□□ -1.91
CPNE4-214ENST00000617767 SPINK1P00995 79 aa3.12□□□□□ -1.91
CPNE4-214ENST00000617767 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
CPNE4-214ENST00000617767 PKHD1L1Q86WI1 4243 aa3.12□□□□□ -1.91
CPNE4-214ENST00000617767 HSPG2P98160 4391 aa3.11□□□□□ -1.91
CPNE4-214ENST00000617767 LCE2AQ5TA79 106 aaPredicted RBP3.1□□□□□ -1.91
CPNE4-214ENST00000617767 TPRXLQ17RH7 258 aa3.1□□□□□ -1.91
CPNE4-214ENST00000617767 KRTAP13-3Q3SY46 172 aa3.1□□□□□ -1.91
CPNE4-214ENST00000617767 C9orf92A6NGG3 77 aa3.09□□□□□ -1.91
CPNE4-214ENST00000617767 RYR1P21817 5038 aa3.09□□□□□ -1.92
CPNE4-214ENST00000617767 A0A1B0GVY2 172 aa3.08□□□□□ -1.92
CPNE4-214ENST00000617767 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
CPNE4-214ENST00000617767 IGKV2D-30A0A075B6S6 120 aa3.06□□□□□ -1.92
CPNE4-214ENST00000617767 IGKV2-30P06310 120 aa3.06□□□□□ -1.92
CPNE4-214ENST00000617767 A0A1B0GU33 70 aa3.05□□□□□ -1.92
CPNE4-214ENST00000617767 TNXBP22105 4242 aa3.04□□□□□ -1.92
CPNE4-214ENST00000617767 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.92
CPNE4-214ENST00000617767 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
CPNE4-214ENST00000617767 KRTAP4-8Q9BYQ9 185 aa3.03□□□□□ -1.92
CPNE4-214ENST00000617767 Q5VSD8 79 aa3.03□□□□□ -1.92
CPNE4-214ENST00000617767 KRTAP17-1Q9BYP8 105 aa3.03□□□□□ -1.92
CPNE4-214ENST00000617767 LPAP08519 4548 aa3.01□□□□□ -1.93
CPNE4-214ENST00000617767 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
CPNE4-214ENST00000617767 H1FX-AS1Q4G0G2 97 aa3.01□□□□□ -1.93
CPNE4-214ENST00000617767 Q8N1X5 172 aa3□□□□□ -1.93
CPNE4-214ENST00000617767 LRP2P98164 4655 aa3□□□□□ -1.93
CPNE4-214ENST00000617767 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
CPNE4-214ENST00000617767 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
CPNE4-214ENST00000617767 HERC2O95714 4834 aa2.95□□□□□ -1.94
CPNE4-214ENST00000617767 KRTAP4-5Q9BYR2 181 aa2.95□□□□□ -1.94
CPNE4-214ENST00000617767 A0A0D9SG42 100 aa2.92□□□□□ -1.94
CPNE4-214ENST00000617767 COX6B2Q6YFQ2 88 aa2.92□□□□□ -1.94
CPNE4-214ENST00000617767 MUC2Q02817 5179 aa2.92□□□□□ -1.94
CPNE4-214ENST00000617767 RPL37P61927 97 aaKnown RBP2.92□□□□□ -1.94
CPNE4-214ENST00000617767 HERC1Q15751 4861 aa2.91□□□□□ -1.94
CPNE4-214ENST00000617767 KRTAP10-8P60410 259 aa2.89□□□□□ -1.95
CPNE4-214ENST00000617767 RPS29P62273 56 aaKnown RBP2.87□□□□□ -1.95
CPNE4-214ENST00000617767 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
CPNE4-214ENST00000617767 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
CPNE4-214ENST00000617767 LCE2CQ5TA81 110 aa2.86□□□□□ -1.95
CPNE4-214ENST00000617767 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
CPNE4-214ENST00000617767 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
CPNE4-214ENST00000617767 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
CPNE4-214ENST00000617767 XP32Q5T750 250 aa2.85□□□□□ -1.95
CPNE4-214ENST00000617767 KRTAP3-1Q9BYR8 98 aa2.84□□□□□ -1.95
CPNE4-214ENST00000617767 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.96
CPNE4-214ENST00000617767 KRTAP13-4Q3LI77 160 aa2.84□□□□□ -1.96
CPNE4-214ENST00000617767 PLAC4Q8WY50 150 aa2.83□□□□□ -1.96
CPNE4-214ENST00000617767 BIRC6Q9NR09 4857 aa2.82□□□□□ -1.96
CPNE4-214ENST00000617767 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
CPNE4-214ENST00000617767 S4R3F8 94 aa2.81□□□□□ -1.96
CPNE4-214ENST00000617767 LORP23490 312 aaPredicted RBP2.8□□□□□ -1.96
CPNE4-214ENST00000617767 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
CPNE4-214ENST00000617767 FAT4Q6V0I7 4981 aa2.78□□□□□ -1.96
CPNE4-214ENST00000617767 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
CPNE4-214ENST00000617767 UBR4Q5T4S7 5183 aa2.78□□□□□ -1.97
CPNE4-214ENST00000617767 KRTAP10-6P60371 365 aaPredicted RBP2.76□□□□□ -1.97
CPNE4-214ENST00000617767 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
CPNE4-214ENST00000617767 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
CPNE4-214ENST00000617767 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
CPNE4-214ENST00000617767 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
CPNE4-214ENST00000617767 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
CPNE4-214ENST00000617767 R4GN34 69 aa2.71□□□□□ -1.98
CPNE4-214ENST00000617767 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
CPNE4-214ENST00000617767 KRTAP4-1Q9BYQ7 146 aa2.69□□□□□ -1.98
CPNE4-214ENST00000617767 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
CPNE4-214ENST00000617767 KRTAP23-1A1A580 65 aa2.66□□□□□ -1.98
CPNE4-214ENST00000617767 KRTAP19-1Q8IUB9 90 aa2.65□□□□□ -1.99
CPNE4-214ENST00000617767 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
CPNE4-214ENST00000617767 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
CPNE4-214ENST00000617767 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
CPNE4-214ENST00000617767 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -1.99
CPNE4-214ENST00000617767 M0QZ58 72 aa2.58□□□□□ -2
CPNE4-214ENST00000617767 INE1O15225 51 aa2.56□□□□□ -2
CPNE4-214ENST00000617767 KRTAP9-8Q9BYQ0 159 aa2.55□□□□□ -2
CPNE4-214ENST00000617767 M0R2T5 61 aa2.54□□□□□ -2
CPNE4-214ENST00000617767 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
CPNE4-214ENST00000617767 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
CPNE4-214ENST00000617767 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
CPNE4-214ENST00000617767 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
CPNE4-214ENST00000617767 USH2AO75445 5202 aa2.48□□□□□ -2.01
CPNE4-214ENST00000617767 FSIP2Q5CZC0 6907 aa2.46□□□□□ -2.02
CPNE4-214ENST00000617767 MT1HP80294 61 aa2.42□□□□□ -2.02
CPNE4-214ENST00000617767 KRTAP10-10P60014 251 aa2.41□□□□□ -2.02
CPNE4-214ENST00000617767 MT1FP04733 61 aa2.37□□□□□ -2.03
CPNE4-214ENST00000617767 KMT2DO14686 5537 aa2.37□□□□□ -2.03
CPNE4-214ENST00000617767 MT2AP02795 61 aa2.35□□□□□ -2.03
CPNE4-214ENST00000617767 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
CPNE4-214ENST00000617767 TNP1P09430 55 aa2.29□□□□□ -2.04
CPNE4-214ENST00000617767 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
CPNE4-214ENST00000617767 LCE4AQ5TA78 99 aa2.26□□□□□ -2.05
CPNE4-214ENST00000617767 MT1BP07438 61 aa2.23□□□□□ -2.05
CPNE4-214ENST00000617767 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
CPNE4-214ENST00000617767 SSPOA2VEC9 5147 aa2.21□□□□□ -2.05
CPNE4-214ENST00000617767 LCE5AQ5TCM9 118 aa2.2□□□□□ -2.06
CPNE4-214ENST00000617767 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms