RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 CCDC179H3BU77 68 aa7.41□□□□□ -1.22
PCDHGC3-204ENST00000617222 NDUFC1O43677 76 aa7.41□□□□□ -1.22
PCDHGC3-204ENST00000617222 ACYP2P14621 99 aa7.41□□□□□ -1.22
PCDHGC3-204ENST00000617222 CYSTM1Q9H1C7 97 aa7.41□□□□□ -1.22
PCDHGC3-204ENST00000617222 MT2AP02795 61 aa7.4□□□□□ -1.22
PCDHGC3-204ENST00000617222 H7BZZ5 65 aa7.37□□□□□ -1.23
PCDHGC3-204ENST00000617222 MT1FP04733 61 aa7.35□□□□□ -1.23
PCDHGC3-204ENST00000617222 KRTAP10-10P60014 251 aa7.35□□□□□ -1.23
PCDHGC3-204ENST00000617222 CHKB-CPT1BH3BT56 60 aa7.28□□□□□ -1.24
PCDHGC3-204ENST00000617222 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
PCDHGC3-204ENST00000617222 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
PCDHGC3-204ENST00000617222 COA5Q86WW8 74 aa7.22□□□□□ -1.25
PCDHGC3-204ENST00000617222 SPTSSBQ8NFR3 76 aa7.22□□□□□ -1.25
PCDHGC3-204ENST00000617222 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
PCDHGC3-204ENST00000617222 H0YAA0 97 aa7.19□□□□□ -1.26
PCDHGC3-204ENST00000617222 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
PCDHGC3-204ENST00000617222 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
PCDHGC3-204ENST00000617222 TMEM258P61165 79 aa7.12□□□□□ -1.27
PCDHGC3-204ENST00000617222 LCE2BO14633 110 aa7.09□□□□□ -1.27
PCDHGC3-204ENST00000617222 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
PCDHGC3-204ENST00000617222 PCP4P48539 62 aa7.07□□□□□ -1.28
PCDHGC3-204ENST00000617222 P0C880 135 aa7.06□□□□□ -1.28
PCDHGC3-204ENST00000617222 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
PCDHGC3-204ENST00000617222 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
PCDHGC3-204ENST00000617222 SPRR2GQ9BYE4 73 aa7.01□□□□□ -1.29
PCDHGC3-204ENST00000617222 USH2AO75445 5202 aa6.95□□□□□ -1.3
PCDHGC3-204ENST00000617222 R4GN34 69 aa6.94□□□□□ -1.3
PCDHGC3-204ENST00000617222 SEC61GP60059 68 aa6.93□□□□□ -1.3
PCDHGC3-204ENST00000617222 M0QZ58 72 aa6.92□□□□□ -1.3
PCDHGC3-204ENST00000617222 CRCT1Q9UGL9 99 aa6.92□□□□□ -1.3
PCDHGC3-204ENST00000617222 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
PCDHGC3-204ENST00000617222 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
PCDHGC3-204ENST00000617222 FSIP2Q5CZC0 6907 aa6.89□□□□□ -1.31
PCDHGC3-204ENST00000617222 Q5VV11 94 aa6.88□□□□□ -1.31
PCDHGC3-204ENST00000617222 MT1BP07438 61 aa6.86□□□□□ -1.31
PCDHGC3-204ENST00000617222 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
PCDHGC3-204ENST00000617222 A0A1B0GU69 56 aa6.84□□□□□ -1.31
PCDHGC3-204ENST00000617222 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
PCDHGC3-204ENST00000617222 SSPOA2VEC9 5147 aa6.8□□□□□ -1.32
PCDHGC3-204ENST00000617222 LINC01558Q9Y6Z2 57 aa6.79□□□□□ -1.32
PCDHGC3-204ENST00000617222 A0A1B0GU33 70 aa6.78□□□□□ -1.32
PCDHGC3-204ENST00000617222 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
PCDHGC3-204ENST00000617222 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
PCDHGC3-204ENST00000617222 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
PCDHGC3-204ENST00000617222 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
PCDHGC3-204ENST00000617222 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
PCDHGC3-204ENST00000617222 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
PCDHGC3-204ENST00000617222 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
PCDHGC3-204ENST00000617222 V9GYY9 64 aa6.65□□□□□ -1.34
PCDHGC3-204ENST00000617222 A0A0D9SG42 100 aa6.64□□□□□ -1.35
PCDHGC3-204ENST00000617222 A6NN06 94 aa6.63□□□□□ -1.35
PCDHGC3-204ENST00000617222 Q1T7F1 81 aa6.63□□□□□ -1.35
PCDHGC3-204ENST00000617222 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
PCDHGC3-204ENST00000617222 FCGBPQ9Y6R7 5405 aaPredicted RBP6.59□□□□□ -1.35
PCDHGC3-204ENST00000617222 PSPHP1O15172 72 aa6.58□□□□□ -1.36
PCDHGC3-204ENST00000617222 A8MU10 97 aa6.54□□□□□ -1.36
PCDHGC3-204ENST00000617222 UQCR11O14957 56 aa6.53□□□□□ -1.36
PCDHGC3-204ENST00000617222 MT1XP80297 61 aa6.53□□□□□ -1.36
PCDHGC3-204ENST00000617222 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
PCDHGC3-204ENST00000617222 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
PCDHGC3-204ENST00000617222 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
PCDHGC3-204ENST00000617222 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
PCDHGC3-204ENST00000617222 KRTAP12-2P59991 146 aa6.45□□□□□ -1.38
PCDHGC3-204ENST00000617222 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
PCDHGC3-204ENST00000617222 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
PCDHGC3-204ENST00000617222 A6NED7 52 aa6.37□□□□□ -1.39
PCDHGC3-204ENST00000617222 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
PCDHGC3-204ENST00000617222 MACF1Q9UPN3 7388 aaKnown RBP6.25□□□□□ -1.41
PCDHGC3-204ENST00000617222 K7ERS5 55 aa6.22□□□□□ -1.41
PCDHGC3-204ENST00000617222 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
PCDHGC3-204ENST00000617222 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
PCDHGC3-204ENST00000617222 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
PCDHGC3-204ENST00000617222 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
PCDHGC3-204ENST00000617222 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
PCDHGC3-204ENST00000617222 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
PCDHGC3-204ENST00000617222 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
PCDHGC3-204ENST00000617222 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
PCDHGC3-204ENST00000617222 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
PCDHGC3-204ENST00000617222 KMT2DO14686 5537 aa6.08□□□□□ -1.44
PCDHGC3-204ENST00000617222 TNP1P09430 55 aa6.06□□□□□ -1.44
PCDHGC3-204ENST00000617222 KRTAP5-9P26371 169 aa6.01□□□□□ -1.45
PCDHGC3-204ENST00000617222 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
PCDHGC3-204ENST00000617222 BRK1Q8WUW1 75 aa5.96□□□□□ -1.46
PCDHGC3-204ENST00000617222 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
PCDHGC3-204ENST00000617222 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
PCDHGC3-204ENST00000617222 ROMO1P60602 79 aa5.9□□□□□ -1.46
PCDHGC3-204ENST00000617222 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
PCDHGC3-204ENST00000617222 KRTAP19-7Q3SYF9 63 aa5.83□□□□□ -1.48
PCDHGC3-204ENST00000617222 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
PCDHGC3-204ENST00000617222 KRTAP19-5Q3LI72 72 aa5.82□□□□□ -1.48
PCDHGC3-204ENST00000617222 SPRR2EP22531 72 aa5.79□□□□□ -1.48
PCDHGC3-204ENST00000617222 SPRR2BP35325 72 aa5.79□□□□□ -1.48
PCDHGC3-204ENST00000617222 SPRR2AP35326 72 aa5.79□□□□□ -1.48
PCDHGC3-204ENST00000617222 MT1EP04732 61 aa5.76□□□□□ -1.49
PCDHGC3-204ENST00000617222 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
PCDHGC3-204ENST00000617222 NEBP20929 6669 aa5.76□□□□□ -1.49
PCDHGC3-204ENST00000617222 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
PCDHGC3-204ENST00000617222 MDN1Q9NU22 5596 aa5.71□□□□□ -1.5
PCDHGC3-204ENST00000617222 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
PCDHGC3-204ENST00000617222 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms