RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 A0A1B0GU69 56 aa6.73□□□□□ -1.33
TULP4-206ENST00000616856 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
TULP4-206ENST00000616856 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
TULP4-206ENST00000616856 CSAG1Q6PB30 78 aa6.68□□□□□ -1.34
TULP4-206ENST00000616856 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
TULP4-206ENST00000616856 A8MUU9 505 aa6.67□□□□□ -1.34
TULP4-206ENST00000616856 UQCR11O14957 56 aa6.62□□□□□ -1.35
TULP4-206ENST00000616856 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
TULP4-206ENST00000616856 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
TULP4-206ENST00000616856 PCLOQ9Y6V0 5065 aa6.57□□□□□ -1.36
TULP4-206ENST00000616856 J3QL48 77 aa6.56□□□□□ -1.36
TULP4-206ENST00000616856 ROMO1P60602 79 aa6.54□□□□□ -1.36
TULP4-206ENST00000616856 LPAP08519 4548 aa6.51□□□□□ -1.37
TULP4-206ENST00000616856 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
TULP4-206ENST00000616856 HERC1Q15751 4861 aa6.47□□□□□ -1.37
TULP4-206ENST00000616856 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
TULP4-206ENST00000616856 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
TULP4-206ENST00000616856 COX6B2Q6YFQ2 88 aa6.45□□□□□ -1.38
TULP4-206ENST00000616856 LRP2P98164 4655 aa6.45□□□□□ -1.38
TULP4-206ENST00000616856 XP32Q5T750 250 aa6.44□□□□□ -1.38
TULP4-206ENST00000616856 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
TULP4-206ENST00000616856 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
TULP4-206ENST00000616856 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
TULP4-206ENST00000616856 A0A1B0GU33 70 aa6.38□□□□□ -1.39
TULP4-206ENST00000616856 P0C880 135 aa6.37□□□□□ -1.39
TULP4-206ENST00000616856 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
TULP4-206ENST00000616856 H0YAA0 97 aa6.34□□□□□ -1.39
TULP4-206ENST00000616856 HMCN2Q8NDA2 5059 aa6.33□□□□□ -1.4
TULP4-206ENST00000616856 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
TULP4-206ENST00000616856 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
TULP4-206ENST00000616856 K7ERS5 55 aa6.22□□□□□ -1.41
TULP4-206ENST00000616856 S4R3F8 94 aa6.22□□□□□ -1.41
TULP4-206ENST00000616856 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
TULP4-206ENST00000616856 SEC61BP60468 96 aaKnown RBP6.19□□□□□ -1.42
TULP4-206ENST00000616856 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
TULP4-206ENST00000616856 MUC2Q02817 5179 aa6.15□□□□□ -1.42
TULP4-206ENST00000616856 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
TULP4-206ENST00000616856 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
TULP4-206ENST00000616856 CRIPTQ9P021 101 aa6.1□□□□□ -1.43
TULP4-206ENST00000616856 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
TULP4-206ENST00000616856 UBR4Q5T4S7 5183 aa6.07□□□□□ -1.44
TULP4-206ENST00000616856 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
TULP4-206ENST00000616856 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
TULP4-206ENST00000616856 A0A0D9SG42 100 aa6.02□□□□□ -1.45
TULP4-206ENST00000616856 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
TULP4-206ENST00000616856 M0QZ58 72 aa5.94□□□□□ -1.46
TULP4-206ENST00000616856 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
TULP4-206ENST00000616856 KRTAP19-2Q3LHN2 52 aa5.9□□□□□ -1.47
TULP4-206ENST00000616856 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
TULP4-206ENST00000616856 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
TULP4-206ENST00000616856 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
TULP4-206ENST00000616856 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
TULP4-206ENST00000616856 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
TULP4-206ENST00000616856 R4GN34 69 aa5.77□□□□□ -1.49
TULP4-206ENST00000616856 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
TULP4-206ENST00000616856 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
TULP4-206ENST00000616856 MT1HP80294 61 aa5.67□□□□□ -1.5
TULP4-206ENST00000616856 M0R2T5 61 aa5.66□□□□□ -1.5
TULP4-206ENST00000616856 LCE2BO14633 110 aa5.53□□□□□ -1.52
TULP4-206ENST00000616856 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
TULP4-206ENST00000616856 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
TULP4-206ENST00000616856 MT2AP02795 61 aa5.44□□□□□ -1.54
TULP4-206ENST00000616856 MT1FP04733 61 aa5.42□□□□□ -1.54
TULP4-206ENST00000616856 LCE2AQ5TA79 106 aaPredicted RBP5.42□□□□□ -1.54
TULP4-206ENST00000616856 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
TULP4-206ENST00000616856 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
TULP4-206ENST00000616856 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
TULP4-206ENST00000616856 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
TULP4-206ENST00000616856 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
TULP4-206ENST00000616856 TNP1P09430 55 aa5.29□□□□□ -1.56
TULP4-206ENST00000616856 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
TULP4-206ENST00000616856 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
TULP4-206ENST00000616856 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.59
TULP4-206ENST00000616856 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
TULP4-206ENST00000616856 USH2AO75445 5202 aa5.13□□□□□ -1.59
TULP4-206ENST00000616856 MT1BP07438 61 aa5.12□□□□□ -1.59
TULP4-206ENST00000616856 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
TULP4-206ENST00000616856 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
TULP4-206ENST00000616856 MT1XP80297 61 aa4.96□□□□□ -1.62
TULP4-206ENST00000616856 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
TULP4-206ENST00000616856 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
TULP4-206ENST00000616856 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
TULP4-206ENST00000616856 INE1O15225 51 aa4.9□□□□□ -1.63
TULP4-206ENST00000616856 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
TULP4-206ENST00000616856 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
TULP4-206ENST00000616856 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
TULP4-206ENST00000616856 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
TULP4-206ENST00000616856 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
TULP4-206ENST00000616856 KMT2DO14686 5537 aa4.76□□□□□ -1.65
TULP4-206ENST00000616856 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
TULP4-206ENST00000616856 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
TULP4-206ENST00000616856 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
TULP4-206ENST00000616856 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
TULP4-206ENST00000616856 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
TULP4-206ENST00000616856 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
TULP4-206ENST00000616856 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
TULP4-206ENST00000616856 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
TULP4-206ENST00000616856 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
TULP4-206ENST00000616856 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
TULP4-206ENST00000616856 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms