RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 TPRXLQ17RH7 258 aa1.92□□□□□ -2.1
LTN1-207ENST00000614971 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
LTN1-207ENST00000614971 DNAH8Q96JB1 4490 aa1.91□□□□□ -2.1
LTN1-207ENST00000614971 KRTAP25-1Q3LHN0 102 aa1.9□□□□□ -2.1
LTN1-207ENST00000614971 NDUFAF8A1L188 74 aa1.89□□□□□ -2.11
LTN1-207ENST00000614971 KRTAP3-1Q9BYR8 98 aa1.89□□□□□ -2.11
LTN1-207ENST00000614971 KIAA1109Q2LD37 5005 aa1.87□□□□□ -2.11
LTN1-207ENST00000614971 TNP1P09430 55 aa1.87□□□□□ -2.11
LTN1-207ENST00000614971 HYDINQ4G0P3 5121 aa1.87□□□□□ -2.11
LTN1-207ENST00000614971 MT1HL1P0DM35 61 aa1.86□□□□□ -2.11
LTN1-207ENST00000614971 KRTAP12-2P59991 146 aa1.86□□□□□ -2.11
LTN1-207ENST00000614971 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
LTN1-207ENST00000614971 LRP1BQ9NZR2 4599 aa1.85□□□□□ -2.11
LTN1-207ENST00000614971 DNAH6Q9C0G6 4158 aa1.85□□□□□ -2.11
LTN1-207ENST00000614971 LRP1Q07954 4544 aaKnown RBP1.85□□□□□ -2.11
LTN1-207ENST00000614971 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
LTN1-207ENST00000614971 PKHD1P08F94 4074 aa1.83□□□□□ -2.12
LTN1-207ENST00000614971 DYNC1H1Q14204 4646 aaKnown RBP1.83□□□□□ -2.12
LTN1-207ENST00000614971 DNAH17Q9UFH2 4485 aa1.83□□□□□ -2.12
LTN1-207ENST00000614971 RYR3Q15413 4870 aa1.82□□□□□ -2.12
LTN1-207ENST00000614971 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
LTN1-207ENST00000614971 VPS13DQ5THJ4 4388 aa1.82□□□□□ -2.12
LTN1-207ENST00000614971 DNAH2Q9P225 4427 aa1.81□□□□□ -2.12
LTN1-207ENST00000614971 SACSQ9NZJ4 4579 aa1.81□□□□□ -2.12
LTN1-207ENST00000614971 A0A0A0MQY5 61 aa1.81□□□□□ -2.12
LTN1-207ENST00000614971 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
LTN1-207ENST00000614971 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
LTN1-207ENST00000614971 KRTAP10-6P60371 365 aaPredicted RBP1.79□□□□□ -2.12
LTN1-207ENST00000614971 LRP2P98164 4655 aa1.79□□□□□ -2.12
LTN1-207ENST00000614971 KMT2CQ8NEZ4 4911 aaKnown RBP1.78□□□□□ -2.12
LTN1-207ENST00000614971 APOBP04114 4563 aaKnown RBP1.78□□□□□ -2.12
LTN1-207ENST00000614971 DNAH3Q8TD57 4116 aa1.78□□□□□ -2.12
LTN1-207ENST00000614971 KRTAP3-3Q9BYR6 98 aa1.76□□□□□ -2.13
LTN1-207ENST00000614971 FSIP2Q5CZC0 6907 aa1.76□□□□□ -2.13
LTN1-207ENST00000614971 LORP23490 312 aaPredicted RBP1.76□□□□□ -2.13
LTN1-207ENST00000614971 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
LTN1-207ENST00000614971 FAT2Q9NYQ8 4349 aa1.74□□□□□ -2.13
LTN1-207ENST00000614971 PRO2289Q9P1D8 64 aa1.74□□□□□ -2.13
LTN1-207ENST00000614971 KRTAP3-2Q9BYR7 98 aa1.73□□□□□ -2.13
LTN1-207ENST00000614971 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
LTN1-207ENST00000614971 DYNC2H1Q8NCM8 4307 aaKnown RBP1.73□□□□□ -2.13
LTN1-207ENST00000614971 HERC2O95714 4834 aa1.72□□□□□ -2.13
LTN1-207ENST00000614971 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
LTN1-207ENST00000614971 LPAP08519 4548 aa1.72□□□□□ -2.13
LTN1-207ENST00000614971 ALMS1Q8TCU4 4167 aa1.71□□□□□ -2.14
LTN1-207ENST00000614971 PP632Q6XCG6 107 aa1.71□□□□□ -2.14
LTN1-207ENST00000614971 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
LTN1-207ENST00000614971 MUC2Q02817 5179 aa1.66□□□□□ -2.14
LTN1-207ENST00000614971 KRTAP15-1Q3LI76 137 aa1.66□□□□□ -2.14
LTN1-207ENST00000614971 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.14
LTN1-207ENST00000614971 HSPG2P98160 4391 aa1.65□□□□□ -2.14
LTN1-207ENST00000614971 RYR2Q92736 4967 aa1.65□□□□□ -2.15
LTN1-207ENST00000614971 RNF213Q63HN8 5207 aa1.65□□□□□ -2.15
LTN1-207ENST00000614971 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
LTN1-207ENST00000614971 HERC1Q15751 4861 aa1.62□□□□□ -2.15
LTN1-207ENST00000614971 LCE3AQ5TA76 89 aa1.62□□□□□ -2.15
LTN1-207ENST00000614971 UBR4Q5T4S7 5183 aa1.61□□□□□ -2.15
LTN1-207ENST00000614971 MT1HP80294 61 aa1.61□□□□□ -2.15
LTN1-207ENST00000614971 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
LTN1-207ENST00000614971 PKD1P98161 4303 aa1.59□□□□□ -2.15
LTN1-207ENST00000614971 MT1FP04733 61 aa1.58□□□□□ -2.16
LTN1-207ENST00000614971 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
LTN1-207ENST00000614971 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
LTN1-207ENST00000614971 MT2AP02795 61 aa1.58□□□□□ -2.16
LTN1-207ENST00000614971 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
LTN1-207ENST00000614971 PKHD1L1Q86WI1 4243 aa1.56□□□□□ -2.16
LTN1-207ENST00000614971 BIRC6Q9NR09 4857 aa1.56□□□□□ -2.16
LTN1-207ENST00000614971 SSPOA2VEC9 5147 aa1.54□□□□□ -2.16
LTN1-207ENST00000614971 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
LTN1-207ENST00000614971 TNXBP22105 4242 aa1.51□□□□□ -2.17
LTN1-207ENST00000614971 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
LTN1-207ENST00000614971 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
LTN1-207ENST00000614971 KRTAP19-1Q8IUB9 90 aa1.49□□□□□ -2.17
LTN1-207ENST00000614971 SPRR2FQ96RM1 72 aa1.49□□□□□ -2.17
LTN1-207ENST00000614971 KRTAP10-5P60370 271 aa1.49□□□□□ -2.17
LTN1-207ENST00000614971 KRTAP10-7P60409 375 aaPredicted RBP1.49□□□□□ -2.17
LTN1-207ENST00000614971 SPRR2GQ9BYE4 73 aa1.49□□□□□ -2.17
LTN1-207ENST00000614971 KRTAP4-8A0A0G2JLE6 195 aa1.49□□□□□ -2.17
LTN1-207ENST00000614971 KRTAP4-8Q9BYQ9 185 aa1.49□□□□□ -2.17
LTN1-207ENST00000614971 HMCN2Q8NDA2 5059 aa1.48□□□□□ -2.17
LTN1-207ENST00000614971 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
LTN1-207ENST00000614971 USH2AO75445 5202 aa1.47□□□□□ -2.17
LTN1-207ENST00000614971 LCE2CQ5TA81 110 aa1.46□□□□□ -2.18
LTN1-207ENST00000614971 KRTAP9-8Q9BYQ0 159 aa1.45□□□□□ -2.18
LTN1-207ENST00000614971 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
LTN1-207ENST00000614971 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
LTN1-207ENST00000614971 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
LTN1-207ENST00000614971 KMT2DO14686 5537 aa1.43□□□□□ -2.18
LTN1-207ENST00000614971 MT1BP07438 61 aa1.42□□□□□ -2.18
LTN1-207ENST00000614971 MT1XP80297 61 aa1.42□□□□□ -2.18
LTN1-207ENST00000614971 KRTAP4-7Q9BYR0 210 aa1.41□□□□□ -2.18
LTN1-207ENST00000614971 KRTAP19-2Q3LHN2 52 aa1.41□□□□□ -2.18
LTN1-207ENST00000614971 LCE2BO14633 110 aa1.4□□□□□ -2.18
LTN1-207ENST00000614971 KRTAP9-3Q9BYQ3 159 aa1.39□□□□□ -2.19
LTN1-207ENST00000614971 MT1GP13640 62 aa1.38□□□□□ -2.19
LTN1-207ENST00000614971 LCE3CQ5T5A8 94 aa1.37□□□□□ -2.19
LTN1-207ENST00000614971 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
LTN1-207ENST00000614971 KRTAP23-1A1A580 65 aa1.37□□□□□ -2.19
LTN1-207ENST00000614971 LCE3BQ5TA77 95 aa1.36□□□□□ -2.19
LTN1-207ENST00000614971 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms