RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 Q1T7F1 81 aa6.91□□□□□ -1.3
TMEM254-213ENST00000613758 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
TMEM254-213ENST00000613758 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
TMEM254-213ENST00000613758 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
TMEM254-213ENST00000613758 V9GYY9 64 aa6.82□□□□□ -1.32
TMEM254-213ENST00000613758 LCE2CQ5TA81 110 aa6.82□□□□□ -1.32
TMEM254-213ENST00000613758 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
TMEM254-213ENST00000613758 SVIPQ8NHG7 77 aa6.78□□□□□ -1.32
TMEM254-213ENST00000613758 PSPHP1O15172 72 aa6.78□□□□□ -1.32
TMEM254-213ENST00000613758 S4R3F8 94 aa6.76□□□□□ -1.33
TMEM254-213ENST00000613758 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
TMEM254-213ENST00000613758 Q5VV11 94 aa6.74□□□□□ -1.33
TMEM254-213ENST00000613758 LCA10Q71F78 164 aa6.74□□□□□ -1.33
TMEM254-213ENST00000613758 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
TMEM254-213ENST00000613758 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
TMEM254-213ENST00000613758 MT1HP80294 61 aa6.69□□□□□ -1.34
TMEM254-213ENST00000613758 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
TMEM254-213ENST00000613758 A0A1B0GU69 56 aa6.65□□□□□ -1.34
TMEM254-213ENST00000613758 CSAG1Q6PB30 78 aa6.65□□□□□ -1.35
TMEM254-213ENST00000613758 M0R2T5 61 aa6.63□□□□□ -1.35
TMEM254-213ENST00000613758 LCE2BO14633 110 aa6.57□□□□□ -1.36
TMEM254-213ENST00000613758 SEC61GP60059 68 aa6.56□□□□□ -1.36
TMEM254-213ENST00000613758 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
TMEM254-213ENST00000613758 A6NED7 52 aa6.54□□□□□ -1.36
TMEM254-213ENST00000613758 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
TMEM254-213ENST00000613758 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
TMEM254-213ENST00000613758 A8MU10 97 aa6.51□□□□□ -1.37
TMEM254-213ENST00000613758 UQCR11O14957 56 aa6.47□□□□□ -1.37
TMEM254-213ENST00000613758 H0YAA0 97 aa6.46□□□□□ -1.38
TMEM254-213ENST00000613758 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
TMEM254-213ENST00000613758 ADM2Q7Z4H4 148 aa6.45□□□□□ -1.38
TMEM254-213ENST00000613758 A0A1B0GU33 70 aa6.44□□□□□ -1.38
TMEM254-213ENST00000613758 P0C880 135 aa6.44□□□□□ -1.38
TMEM254-213ENST00000613758 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
TMEM254-213ENST00000613758 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
TMEM254-213ENST00000613758 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
TMEM254-213ENST00000613758 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
TMEM254-213ENST00000613758 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
TMEM254-213ENST00000613758 MT2AP02795 61 aa6.38□□□□□ -1.39
TMEM254-213ENST00000613758 KRTAP13-4Q3LI77 160 aa6.35□□□□□ -1.39
TMEM254-213ENST00000613758 MT1FP04733 61 aa6.34□□□□□ -1.39
TMEM254-213ENST00000613758 KRTAP10-10P60014 251 aa6.34□□□□□ -1.4
TMEM254-213ENST00000613758 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
TMEM254-213ENST00000613758 R4GN34 69 aa6.23□□□□□ -1.41
TMEM254-213ENST00000613758 M0QZ58 72 aa6.23□□□□□ -1.41
TMEM254-213ENST00000613758 H3BS24 57 aa6.21□□□□□ -1.41
TMEM254-213ENST00000613758 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
TMEM254-213ENST00000613758 A0A0D9SG42 100 aa6.18□□□□□ -1.42
TMEM254-213ENST00000613758 A6NN06 94 aa6.17□□□□□ -1.42
TMEM254-213ENST00000613758 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
TMEM254-213ENST00000613758 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
TMEM254-213ENST00000613758 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
TMEM254-213ENST00000613758 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
TMEM254-213ENST00000613758 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
TMEM254-213ENST00000613758 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
TMEM254-213ENST00000613758 K7ERS5 55 aa6.04□□□□□ -1.44
TMEM254-213ENST00000613758 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
TMEM254-213ENST00000613758 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
TMEM254-213ENST00000613758 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
TMEM254-213ENST00000613758 KRTAP4-6Q9BYQ5 205 aa5.99□□□□□ -1.45
TMEM254-213ENST00000613758 MT1BP07438 61 aa5.96□□□□□ -1.46
TMEM254-213ENST00000613758 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
TMEM254-213ENST00000613758 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
TMEM254-213ENST00000613758 USH2AO75445 5202 aa5.89□□□□□ -1.47
TMEM254-213ENST00000613758 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
TMEM254-213ENST00000613758 ROMO1P60602 79 aa5.86□□□□□ -1.47
TMEM254-213ENST00000613758 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
TMEM254-213ENST00000613758 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
TMEM254-213ENST00000613758 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
TMEM254-213ENST00000613758 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
TMEM254-213ENST00000613758 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
TMEM254-213ENST00000613758 MT1XP80297 61 aa5.73□□□□□ -1.49
TMEM254-213ENST00000613758 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
TMEM254-213ENST00000613758 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
TMEM254-213ENST00000613758 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
TMEM254-213ENST00000613758 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
TMEM254-213ENST00000613758 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.51
TMEM254-213ENST00000613758 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
TMEM254-213ENST00000613758 TNP1P09430 55 aa5.52□□□□□ -1.53
TMEM254-213ENST00000613758 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
TMEM254-213ENST00000613758 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
TMEM254-213ENST00000613758 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
TMEM254-213ENST00000613758 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
TMEM254-213ENST00000613758 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
TMEM254-213ENST00000613758 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
TMEM254-213ENST00000613758 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
TMEM254-213ENST00000613758 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
TMEM254-213ENST00000613758 KMT2DO14686 5537 aa5.27□□□□□ -1.57
TMEM254-213ENST00000613758 MACF1Q9UPN3 7388 aaKnown RBP5.25□□□□□ -1.57
TMEM254-213ENST00000613758 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
TMEM254-213ENST00000613758 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
TMEM254-213ENST00000613758 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
TMEM254-213ENST00000613758 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
TMEM254-213ENST00000613758 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
TMEM254-213ENST00000613758 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
TMEM254-213ENST00000613758 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
TMEM254-213ENST00000613758 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
TMEM254-213ENST00000613758 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
TMEM254-213ENST00000613758 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
TMEM254-213ENST00000613758 MT1EP04732 61 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms