RNA–Protein interactions for RNA: ENST00000613347.1

NEAT1_3.1-201, humanhuman

BASIC

Gene NEAT1_3, Length 159 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1_3.1-201ENST00000613347 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
NEAT1_3.1-201ENST00000613347 LINC00208Q96KT6 92 aa5.12□□□□□ -1.59
NEAT1_3.1-201ENST00000613347 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
NEAT1_3.1-201ENST00000613347 KLKP1Q107X0 134 aa5.1□□□□□ -1.59
NEAT1_3.1-201ENST00000613347 MP68P56378 58 aa5.07□□□□□ -1.6
NEAT1_3.1-201ENST00000613347 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
NEAT1_3.1-201ENST00000613347 TRAV7A0A075B6U4 112 aa5.05□□□□□ -1.6
NEAT1_3.1-201ENST00000613347 A8MUN3 132 aa5.05□□□□□ -1.6
NEAT1_3.1-201ENST00000613347 SPRR2GQ9BYE4 73 aa5.04□□□□□ -1.6
NEAT1_3.1-201ENST00000613347 NDUFC1O43677 76 aa5.02□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 MACF1Q9UPN3 7388 aaKnown RBP5□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 Q5VV11 94 aa5□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 SMIM20Q8N5G0 67 aa5□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 SNURFQ9Y675 71 aa5□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 H0YAA0 97 aa4.99□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 H3BPC8 53 aa4.99□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 SERP2Q8N6R1 65 aa4.97□□□□□ -1.61
NEAT1_3.1-201ENST00000613347 MT1BP07438 61 aa4.96□□□□□ -1.62
NEAT1_3.1-201ENST00000613347 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
NEAT1_3.1-201ENST00000613347 A6NN06 94 aa4.92□□□□□ -1.62
NEAT1_3.1-201ENST00000613347 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
NEAT1_3.1-201ENST00000613347 COX7CP15954 63 aa4.89□□□□□ -1.63
NEAT1_3.1-201ENST00000613347 ADM2Q7Z4H4 148 aa4.89□□□□□ -1.63
NEAT1_3.1-201ENST00000613347 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
NEAT1_3.1-201ENST00000613347 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
NEAT1_3.1-201ENST00000613347 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
NEAT1_3.1-201ENST00000613347 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
NEAT1_3.1-201ENST00000613347 ANAPC13Q9BS18 74 aa4.87□□□□□ -1.63
NEAT1_3.1-201ENST00000613347 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
NEAT1_3.1-201ENST00000613347 ACYP2P14621 99 aa4.8□□□□□ -1.64
NEAT1_3.1-201ENST00000613347 H7BZZ5 65 aa4.78□□□□□ -1.64
NEAT1_3.1-201ENST00000613347 SPANXA2-OT1Q8N9U9 137 aa4.78□□□□□ -1.64
NEAT1_3.1-201ENST00000613347 R4GN34 69 aa4.78□□□□□ -1.64
NEAT1_3.1-201ENST00000613347 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
NEAT1_3.1-201ENST00000613347 P0C880 135 aa4.75□□□□□ -1.65
NEAT1_3.1-201ENST00000613347 SPTSSBQ8NFR3 76 aa4.75□□□□□ -1.65
NEAT1_3.1-201ENST00000613347 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
NEAT1_3.1-201ENST00000613347 CHKB-CPT1BH3BT56 60 aa4.73□□□□□ -1.65
NEAT1_3.1-201ENST00000613347 M0QZ58 72 aa4.72□□□□□ -1.65
NEAT1_3.1-201ENST00000613347 KRTAP3-2Q9BYR7 98 aa4.72□□□□□ -1.65
NEAT1_3.1-201ENST00000613347 COA5Q86WW8 74 aa4.71□□□□□ -1.66
NEAT1_3.1-201ENST00000613347 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
NEAT1_3.1-201ENST00000613347 MT1XP80297 61 aa4.66□□□□□ -1.66
NEAT1_3.1-201ENST00000613347 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
NEAT1_3.1-201ENST00000613347 NEBP20929 6669 aa4.6□□□□□ -1.67
NEAT1_3.1-201ENST00000613347 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
NEAT1_3.1-201ENST00000613347 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
NEAT1_3.1-201ENST00000613347 TMEM258P61165 79 aa4.55□□□□□ -1.68
NEAT1_3.1-201ENST00000613347 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
NEAT1_3.1-201ENST00000613347 KMT2DO14686 5537 aa4.53□□□□□ -1.68
NEAT1_3.1-201ENST00000613347 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
NEAT1_3.1-201ENST00000613347 PCP4P48539 62 aa4.51□□□□□ -1.69
NEAT1_3.1-201ENST00000613347 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
NEAT1_3.1-201ENST00000613347 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
NEAT1_3.1-201ENST00000613347 SEC61GP60059 68 aa4.48□□□□□ -1.69
NEAT1_3.1-201ENST00000613347 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
NEAT1_3.1-201ENST00000613347 MDN1Q9NU22 5596 aa4.47□□□□□ -1.69
NEAT1_3.1-201ENST00000613347 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 SPRR2EP22531 72 aa4.44□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 SPRR2BP35325 72 aa4.44□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 SPRR2AP35326 72 aa4.44□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 A0A1B0GU69 56 aa4.43□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
NEAT1_3.1-201ENST00000613347 A0A1B0GU33 70 aa4.4□□□□□ -1.71
NEAT1_3.1-201ENST00000613347 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
NEAT1_3.1-201ENST00000613347 A0A0D9SG42 100 aa4.39□□□□□ -1.71
NEAT1_3.1-201ENST00000613347 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
NEAT1_3.1-201ENST00000613347 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
NEAT1_3.1-201ENST00000613347 A8MU10 97 aa4.34□□□□□ -1.71
NEAT1_3.1-201ENST00000613347 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
NEAT1_3.1-201ENST00000613347 SPRR2DP22532 72 aa4.29□□□□□ -1.72
NEAT1_3.1-201ENST00000613347 PSPHP1O15172 72 aa4.28□□□□□ -1.72
NEAT1_3.1-201ENST00000613347 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
NEAT1_3.1-201ENST00000613347 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
NEAT1_3.1-201ENST00000613347 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
NEAT1_3.1-201ENST00000613347 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
NEAT1_3.1-201ENST00000613347 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
NEAT1_3.1-201ENST00000613347 Q1T7F1 81 aa4.25□□□□□ -1.73
NEAT1_3.1-201ENST00000613347 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
NEAT1_3.1-201ENST00000613347 V9GYY9 64 aa4.2□□□□□ -1.74
NEAT1_3.1-201ENST00000613347 UQCR11O14957 56 aa4.19□□□□□ -1.74
NEAT1_3.1-201ENST00000613347 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
NEAT1_3.1-201ENST00000613347 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
NEAT1_3.1-201ENST00000613347 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
NEAT1_3.1-201ENST00000613347 MT1EP04732 61 aa4.13□□□□□ -1.75
NEAT1_3.1-201ENST00000613347 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
NEAT1_3.1-201ENST00000613347 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
NEAT1_3.1-201ENST00000613347 A6NED7 52 aa4.1□□□□□ -1.75
NEAT1_3.1-201ENST00000613347 TNP1P09430 55 aa4.08□□□□□ -1.76
NEAT1_3.1-201ENST00000613347 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
NEAT1_3.1-201ENST00000613347 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
NEAT1_3.1-201ENST00000613347 MT1GP13640 62 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms