RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 J3QR89 54 aa5.85□□□□□ -1.47
CBWD3-208ENST00000612050 ATOX1O00244 68 aa5.85□□□□□ -1.47
CBWD3-208ENST00000612050 UQCRQO14949 82 aa5.84□□□□□ -1.47
CBWD3-208ENST00000612050 CSAG1Q6PB30 78 aa5.83□□□□□ -1.48
CBWD3-208ENST00000612050 FAM236AA0A1B0GUQ0 79 aa5.82□□□□□ -1.48
CBWD3-208ENST00000612050 FAM236BA0A1B0GV22 79 aa5.82□□□□□ -1.48
CBWD3-208ENST00000612050 A0A1B0GV90 55 aa5.82□□□□□ -1.48
CBWD3-208ENST00000612050 C5orf47Q569G3 176 aa5.82□□□□□ -1.48
CBWD3-208ENST00000612050 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
CBWD3-208ENST00000612050 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
CBWD3-208ENST00000612050 H0Y9P7 68 aa5.8□□□□□ -1.48
CBWD3-208ENST00000612050 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
CBWD3-208ENST00000612050 MP68P56378 58 aa5.76□□□□□ -1.49
CBWD3-208ENST00000612050 LCA10Q71F78 164 aa5.76□□□□□ -1.49
CBWD3-208ENST00000612050 A0A087WVE0 104 aa5.75□□□□□ -1.49
CBWD3-208ENST00000612050 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
CBWD3-208ENST00000612050 USH2AO75445 5202 aa5.72□□□□□ -1.49
CBWD3-208ENST00000612050 SCGB1A1P11684 91 aa5.71□□□□□ -1.5
CBWD3-208ENST00000612050 LINC00208Q96KT6 92 aa5.71□□□□□ -1.5
CBWD3-208ENST00000612050 A8MUN3 132 aa5.7□□□□□ -1.5
CBWD3-208ENST00000612050 NDUFC1O43677 76 aa5.69□□□□□ -1.5
CBWD3-208ENST00000612050 H3BPC8 53 aa5.65□□□□□ -1.5
CBWD3-208ENST00000612050 OCR1Q9BZK8 76 aa5.65□□□□□ -1.5
CBWD3-208ENST00000612050 IMUPQ9GZP8 106 aa5.65□□□□□ -1.5
CBWD3-208ENST00000612050 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.51
CBWD3-208ENST00000612050 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
CBWD3-208ENST00000612050 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
CBWD3-208ENST00000612050 K7ERU9 68 aa5.61□□□□□ -1.51
CBWD3-208ENST00000612050 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
CBWD3-208ENST00000612050 Q5VV11 94 aa5.6□□□□□ -1.51
CBWD3-208ENST00000612050 SMIM20Q8N5G0 67 aa5.57□□□□□ -1.52
CBWD3-208ENST00000612050 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
CBWD3-208ENST00000612050 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
CBWD3-208ENST00000612050 H0YAA0 97 aa5.56□□□□□ -1.52
CBWD3-208ENST00000612050 A6NN06 94 aa5.5□□□□□ -1.53
CBWD3-208ENST00000612050 ADM2Q7Z4H4 148 aa5.5□□□□□ -1.53
CBWD3-208ENST00000612050 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
CBWD3-208ENST00000612050 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
CBWD3-208ENST00000612050 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
CBWD3-208ENST00000612050 TRAV7A0A075B6U4 112 aa5.48□□□□□ -1.53
CBWD3-208ENST00000612050 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
CBWD3-208ENST00000612050 MT-ATP8P03928 68 aa5.48□□□□□ -1.53
CBWD3-208ENST00000612050 MT1BP07438 61 aa5.45□□□□□ -1.54
CBWD3-208ENST00000612050 ACYP2P14621 99 aa5.45□□□□□ -1.54
CBWD3-208ENST00000612050 SPTSSBQ8NFR3 76 aa5.45□□□□□ -1.54
CBWD3-208ENST00000612050 R4GN34 69 aa5.42□□□□□ -1.54
CBWD3-208ENST00000612050 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
CBWD3-208ENST00000612050 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.54
CBWD3-208ENST00000612050 CHKB-CPT1BH3BT56 60 aa5.4□□□□□ -1.55
CBWD3-208ENST00000612050 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
CBWD3-208ENST00000612050 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
CBWD3-208ENST00000612050 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
CBWD3-208ENST00000612050 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
CBWD3-208ENST00000612050 M0QZ58 72 aa5.34□□□□□ -1.55
CBWD3-208ENST00000612050 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
CBWD3-208ENST00000612050 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
CBWD3-208ENST00000612050 P0C880 135 aa5.31□□□□□ -1.56
CBWD3-208ENST00000612050 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
CBWD3-208ENST00000612050 SPANXA2-OT1Q8N9U9 137 aa5.3□□□□□ -1.56
CBWD3-208ENST00000612050 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
CBWD3-208ENST00000612050 COX7CP15954 63 aa5.16□□□□□ -1.58
CBWD3-208ENST00000612050 SEC61GP60059 68 aa5.16□□□□□ -1.58
CBWD3-208ENST00000612050 MT1XP80297 61 aa5.14□□□□□ -1.59
CBWD3-208ENST00000612050 COA5Q86WW8 74 aa5.13□□□□□ -1.59
CBWD3-208ENST00000612050 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
CBWD3-208ENST00000612050 KRTAP5-9P26371 169 aa5.09□□□□□ -1.59
CBWD3-208ENST00000612050 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
CBWD3-208ENST00000612050 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
CBWD3-208ENST00000612050 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
CBWD3-208ENST00000612050 NEBP20929 6669 aa5.03□□□□□ -1.6
CBWD3-208ENST00000612050 H7BZZ5 65 aa5.03□□□□□ -1.6
CBWD3-208ENST00000612050 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
CBWD3-208ENST00000612050 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
CBWD3-208ENST00000612050 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
CBWD3-208ENST00000612050 A0A1B0GU33 70 aa4.96□□□□□ -1.62
CBWD3-208ENST00000612050 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
CBWD3-208ENST00000612050 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
CBWD3-208ENST00000612050 A0A1B0GU69 56 aa4.94□□□□□ -1.62
CBWD3-208ENST00000612050 SPRR2EP22531 72 aa4.94□□□□□ -1.62
CBWD3-208ENST00000612050 SPRR2BP35325 72 aa4.94□□□□□ -1.62
CBWD3-208ENST00000612050 SPRR2AP35326 72 aa4.94□□□□□ -1.62
CBWD3-208ENST00000612050 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
CBWD3-208ENST00000612050 A0A0D9SG42 100 aa4.92□□□□□ -1.62
CBWD3-208ENST00000612050 ATP5EP56381 51 aaPredicted RBP4.91□□□□□ -1.62
CBWD3-208ENST00000612050 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.62
CBWD3-208ENST00000612050 KRTAP10-12P60413 245 aa4.9□□□□□ -1.62
CBWD3-208ENST00000612050 KMT2DO14686 5537 aa4.9□□□□□ -1.63
CBWD3-208ENST00000612050 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
CBWD3-208ENST00000612050 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
CBWD3-208ENST00000612050 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
CBWD3-208ENST00000612050 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
CBWD3-208ENST00000612050 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
CBWD3-208ENST00000612050 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
CBWD3-208ENST00000612050 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
CBWD3-208ENST00000612050 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
CBWD3-208ENST00000612050 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
CBWD3-208ENST00000612050 SPRR2DP22532 72 aa4.78□□□□□ -1.64
CBWD3-208ENST00000612050 TMEM258P61165 79 aa4.77□□□□□ -1.65
CBWD3-208ENST00000612050 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
CBWD3-208ENST00000612050 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms