RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
PABPC1-224ENST00000610907 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
PABPC1-224ENST00000610907 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
PABPC1-224ENST00000610907 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
PABPC1-224ENST00000610907 RPL37P61927 97 aaKnown RBP5.5□□□□□ -1.53
PABPC1-224ENST00000610907 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
PABPC1-224ENST00000610907 TNXBP22105 4242 aa5.49□□□□□ -1.53
PABPC1-224ENST00000610907 RYR1P21817 5038 aa5.49□□□□□ -1.53
PABPC1-224ENST00000610907 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
PABPC1-224ENST00000610907 HSPG2P98160 4391 aa5.48□□□□□ -1.53
PABPC1-224ENST00000610907 XP32Q5T750 250 aa5.46□□□□□ -1.54
PABPC1-224ENST00000610907 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
PABPC1-224ENST00000610907 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
PABPC1-224ENST00000610907 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
PABPC1-224ENST00000610907 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
PABPC1-224ENST00000610907 DMBT1Q9UGM3 2413 aaPredicted RBP5.41□□□□□ -1.54
PABPC1-224ENST00000610907 A0A1B0GU33 70 aa5.41□□□□□ -1.54
PABPC1-224ENST00000610907 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
PABPC1-224ENST00000610907 H0YAA0 97 aa5.35□□□□□ -1.55
PABPC1-224ENST00000610907 TPRXLQ17RH7 258 aa5.35□□□□□ -1.55
PABPC1-224ENST00000610907 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
PABPC1-224ENST00000610907 S4R3F8 94 aa5.32□□□□□ -1.56
PABPC1-224ENST00000610907 K7ERS5 55 aa5.25□□□□□ -1.57
PABPC1-224ENST00000610907 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
PABPC1-224ENST00000610907 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
PABPC1-224ENST00000610907 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.57
PABPC1-224ENST00000610907 PRAC1Q96KF2 57 aa5.21□□□□□ -1.57
PABPC1-224ENST00000610907 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
PABPC1-224ENST00000610907 HERC1Q15751 4861 aa5.17□□□□□ -1.58
PABPC1-224ENST00000610907 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
PABPC1-224ENST00000610907 LRP2P98164 4655 aa5.13□□□□□ -1.59
PABPC1-224ENST00000610907 P0C880 135 aa5.12□□□□□ -1.59
PABPC1-224ENST00000610907 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
PABPC1-224ENST00000610907 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
PABPC1-224ENST00000610907 M0QZ58 72 aa5.09□□□□□ -1.59
PABPC1-224ENST00000610907 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
PABPC1-224ENST00000610907 ROMO1P60602 79 aa5.08□□□□□ -1.6
PABPC1-224ENST00000610907 A0A0D9SG42 100 aa5.07□□□□□ -1.6
PABPC1-224ENST00000610907 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
PABPC1-224ENST00000610907 LPAP08519 4548 aa5.06□□□□□ -1.6
PABPC1-224ENST00000610907 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
PABPC1-224ENST00000610907 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
PABPC1-224ENST00000610907 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
PABPC1-224ENST00000610907 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
PABPC1-224ENST00000610907 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
PABPC1-224ENST00000610907 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
PABPC1-224ENST00000610907 KRTAP4-1Q9BYQ7 146 aa4.97□□□□□ -1.61
PABPC1-224ENST00000610907 MUC17Q685J3 4493 aa4.96□□□□□ -1.62
PABPC1-224ENST00000610907 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
PABPC1-224ENST00000610907 H3BS24 57 aa4.94□□□□□ -1.62
PABPC1-224ENST00000610907 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
PABPC1-224ENST00000610907 R4GN34 69 aa4.93□□□□□ -1.62
PABPC1-224ENST00000610907 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
PABPC1-224ENST00000610907 CRIPTQ9P021 101 aa4.88□□□□□ -1.63
PABPC1-224ENST00000610907 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
PABPC1-224ENST00000610907 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
PABPC1-224ENST00000610907 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
PABPC1-224ENST00000610907 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
PABPC1-224ENST00000610907 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
PABPC1-224ENST00000610907 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
PABPC1-224ENST00000610907 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
PABPC1-224ENST00000610907 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
PABPC1-224ENST00000610907 MUC2Q02817 5179 aa4.69□□□□□ -1.66
PABPC1-224ENST00000610907 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
PABPC1-224ENST00000610907 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.66
PABPC1-224ENST00000610907 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
PABPC1-224ENST00000610907 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
PABPC1-224ENST00000610907 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
PABPC1-224ENST00000610907 M0R2T5 61 aa4.54□□□□□ -1.68
PABPC1-224ENST00000610907 MT1HP80294 61 aa4.54□□□□□ -1.68
PABPC1-224ENST00000610907 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.69
PABPC1-224ENST00000610907 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
PABPC1-224ENST00000610907 TNP1P09430 55 aa4.51□□□□□ -1.69
PABPC1-224ENST00000610907 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
PABPC1-224ENST00000610907 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
PABPC1-224ENST00000610907 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
PABPC1-224ENST00000610907 MT2AP02795 61 aa4.45□□□□□ -1.7
PABPC1-224ENST00000610907 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
PABPC1-224ENST00000610907 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
PABPC1-224ENST00000610907 MT1FP04733 61 aa4.42□□□□□ -1.7
PABPC1-224ENST00000610907 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
PABPC1-224ENST00000610907 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
PABPC1-224ENST00000610907 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
PABPC1-224ENST00000610907 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
PABPC1-224ENST00000610907 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
PABPC1-224ENST00000610907 MT1BP07438 61 aa4.27□□□□□ -1.73
PABPC1-224ENST00000610907 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
PABPC1-224ENST00000610907 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
PABPC1-224ENST00000610907 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
PABPC1-224ENST00000610907 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
PABPC1-224ENST00000610907 MT1XP80297 61 aa4.21□□□□□ -1.74
PABPC1-224ENST00000610907 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
PABPC1-224ENST00000610907 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
PABPC1-224ENST00000610907 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
PABPC1-224ENST00000610907 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
PABPC1-224ENST00000610907 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
PABPC1-224ENST00000610907 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
PABPC1-224ENST00000610907 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
PABPC1-224ENST00000610907 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
PABPC1-224ENST00000610907 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms