RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 HRES1P13985 223 aa6.2□□□□□ -1.42
CTCFL-221ENST00000608903 A6NED7 52 aa6.19□□□□□ -1.42
CTCFL-221ENST00000608903 ATP11AUNQ6ZP68 121 aa6.18□□□□□ -1.42
CTCFL-221ENST00000608903 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
CTCFL-221ENST00000608903 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
CTCFL-221ENST00000608903 A6NN06 94 aa6.13□□□□□ -1.43
CTCFL-221ENST00000608903 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
CTCFL-221ENST00000608903 SPTSSBQ8NFR3 76 aa6.13□□□□□ -1.43
CTCFL-221ENST00000608903 MUC17Q685J3 4493 aa6.12□□□□□ -1.43
CTCFL-221ENST00000608903 SPINK7P58062 85 aa6.1□□□□□ -1.43
CTCFL-221ENST00000608903 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
CTCFL-221ENST00000608903 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
CTCFL-221ENST00000608903 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
CTCFL-221ENST00000608903 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
CTCFL-221ENST00000608903 ACYP2P14621 99 aa6.05□□□□□ -1.44
CTCFL-221ENST00000608903 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
CTCFL-221ENST00000608903 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
CTCFL-221ENST00000608903 C7orf65Q6ZTY9 151 aa6.01□□□□□ -1.45
CTCFL-221ENST00000608903 UBR4Q5T4S7 5183 aa6□□□□□ -1.45
CTCFL-221ENST00000608903 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
CTCFL-221ENST00000608903 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
CTCFL-221ENST00000608903 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
CTCFL-221ENST00000608903 MUC2Q02817 5179 aa5.93□□□□□ -1.46
CTCFL-221ENST00000608903 A0A1B0GU69 56 aa5.93□□□□□ -1.46
CTCFL-221ENST00000608903 SPATA8Q6RVD6 105 aa5.91□□□□□ -1.46
CTCFL-221ENST00000608903 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
CTCFL-221ENST00000608903 KRTAP3-1Q9BYR8 98 aa5.86□□□□□ -1.47
CTCFL-221ENST00000608903 UQCR11O14957 56 aa5.84□□□□□ -1.47
CTCFL-221ENST00000608903 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
CTCFL-221ENST00000608903 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
CTCFL-221ENST00000608903 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
CTCFL-221ENST00000608903 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
CTCFL-221ENST00000608903 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
CTCFL-221ENST00000608903 H1FX-AS1Q4G0G2 97 aa5.7□□□□□ -1.5
CTCFL-221ENST00000608903 FLGP20930 4061 aaPredicted RBP5.68□□□□□ -1.5
CTCFL-221ENST00000608903 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
CTCFL-221ENST00000608903 H0YAA0 97 aa5.65□□□□□ -1.51
CTCFL-221ENST00000608903 MT1HP80294 61 aa5.64□□□□□ -1.51
CTCFL-221ENST00000608903 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
CTCFL-221ENST00000608903 S4R3F8 94 aa5.61□□□□□ -1.51
CTCFL-221ENST00000608903 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
CTCFL-221ENST00000608903 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
CTCFL-221ENST00000608903 A0A1B0GU33 70 aa5.57□□□□□ -1.52
CTCFL-221ENST00000608903 M0R2T5 61 aa5.49□□□□□ -1.53
CTCFL-221ENST00000608903 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
CTCFL-221ENST00000608903 KRTAP10-6P60371 365 aaPredicted RBP5.46□□□□□ -1.54
CTCFL-221ENST00000608903 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
CTCFL-221ENST00000608903 K7ERS5 55 aa5.41□□□□□ -1.54
CTCFL-221ENST00000608903 P0C880 135 aa5.39□□□□□ -1.55
CTCFL-221ENST00000608903 MT2AP02795 61 aa5.39□□□□□ -1.55
CTCFL-221ENST00000608903 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
CTCFL-221ENST00000608903 MT1FP04733 61 aa5.36□□□□□ -1.55
CTCFL-221ENST00000608903 ROMO1P60602 79 aa5.34□□□□□ -1.55
CTCFL-221ENST00000608903 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CTCFL-221ENST00000608903 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
CTCFL-221ENST00000608903 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
CTCFL-221ENST00000608903 A0A0D9SG42 100 aa5.26□□□□□ -1.57
CTCFL-221ENST00000608903 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
CTCFL-221ENST00000608903 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
CTCFL-221ENST00000608903 KRTAP12-2P59991 146 aa5.17□□□□□ -1.58
CTCFL-221ENST00000608903 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
CTCFL-221ENST00000608903 M0QZ58 72 aa5.16□□□□□ -1.58
CTCFL-221ENST00000608903 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
CTCFL-221ENST00000608903 R4GN34 69 aa5.14□□□□□ -1.59
CTCFL-221ENST00000608903 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
CTCFL-221ENST00000608903 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
CTCFL-221ENST00000608903 SPINT4Q6UDR6 99 aa5.09□□□□□ -1.59
CTCFL-221ENST00000608903 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
CTCFL-221ENST00000608903 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
CTCFL-221ENST00000608903 MT1BP07438 61 aa5.05□□□□□ -1.6
CTCFL-221ENST00000608903 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
CTCFL-221ENST00000608903 USH2AO75445 5202 aa5.04□□□□□ -1.6
CTCFL-221ENST00000608903 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
CTCFL-221ENST00000608903 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
CTCFL-221ENST00000608903 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
CTCFL-221ENST00000608903 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
CTCFL-221ENST00000608903 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
CTCFL-221ENST00000608903 MT1XP80297 61 aa4.84□□□□□ -1.64
CTCFL-221ENST00000608903 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
CTCFL-221ENST00000608903 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
CTCFL-221ENST00000608903 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
CTCFL-221ENST00000608903 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
CTCFL-221ENST00000608903 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
CTCFL-221ENST00000608903 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
CTCFL-221ENST00000608903 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
CTCFL-221ENST00000608903 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
CTCFL-221ENST00000608903 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
CTCFL-221ENST00000608903 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
CTCFL-221ENST00000608903 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
CTCFL-221ENST00000608903 TNP1P09430 55 aa4.58□□□□□ -1.68
CTCFL-221ENST00000608903 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
CTCFL-221ENST00000608903 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
CTCFL-221ENST00000608903 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
CTCFL-221ENST00000608903 KMT2DO14686 5537 aa4.53□□□□□ -1.68
CTCFL-221ENST00000608903 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
CTCFL-221ENST00000608903 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
CTCFL-221ENST00000608903 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
CTCFL-221ENST00000608903 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
CTCFL-221ENST00000608903 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
CTCFL-221ENST00000608903 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms