RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 K7EQZ3 153 aa6.93□□□□□ -1.3
CTSA-216ENST00000607212 H7BZZ5 65 aa6.92□□□□□ -1.3
CTSA-216ENST00000607212 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
CTSA-216ENST00000607212 SNURFQ9Y675 71 aa6.92□□□□□ -1.3
CTSA-216ENST00000607212 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
CTSA-216ENST00000607212 HCG22E2RYF7 251 aa6.88□□□□□ -1.31
CTSA-216ENST00000607212 NDUFC1O43677 76 aa6.87□□□□□ -1.31
CTSA-216ENST00000607212 C5orf47Q569G3 176 aa6.84□□□□□ -1.31
CTSA-216ENST00000607212 A6NN06 94 aa6.83□□□□□ -1.32
CTSA-216ENST00000607212 C4orf26Q17RF5 130 aa6.83□□□□□ -1.32
CTSA-216ENST00000607212 Q5W150 140 aa6.83□□□□□ -1.32
CTSA-216ENST00000607212 SERP1Q9Y6X1 66 aa6.81□□□□□ -1.32
CTSA-216ENST00000607212 CASC2Q6XLA1 102 aa6.79□□□□□ -1.32
CTSA-216ENST00000607212 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
CTSA-216ENST00000607212 NEBP20929 6669 aa6.77□□□□□ -1.33
CTSA-216ENST00000607212 Q5VV11 94 aa6.77□□□□□ -1.33
CTSA-216ENST00000607212 S4R3F8 94 aa6.76□□□□□ -1.33
CTSA-216ENST00000607212 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
CTSA-216ENST00000607212 MT1BP07438 61 aa6.69□□□□□ -1.34
CTSA-216ENST00000607212 MP68P56378 58 aa6.69□□□□□ -1.34
CTSA-216ENST00000607212 MUC12Q9UKN1 5478 aa6.69□□□□□ -1.34
CTSA-216ENST00000607212 H0Y9P7 68 aa6.68□□□□□ -1.34
CTSA-216ENST00000607212 H3BPC8 53 aa6.68□□□□□ -1.34
CTSA-216ENST00000607212 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
CTSA-216ENST00000607212 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
CTSA-216ENST00000607212 KRTAP20-1Q3LI63 56 aa6.67□□□□□ -1.34
CTSA-216ENST00000607212 TRAV22A0A0B4J277 110 aa6.66□□□□□ -1.34
CTSA-216ENST00000607212 LCA10Q71F78 164 aa6.66□□□□□ -1.34
CTSA-216ENST00000607212 LINC00208Q96KT6 92 aa6.66□□□□□ -1.34
CTSA-216ENST00000607212 CYP4F30PQ9H0H9 118 aa6.64□□□□□ -1.35
CTSA-216ENST00000607212 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
CTSA-216ENST00000607212 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
CTSA-216ENST00000607212 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
CTSA-216ENST00000607212 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
CTSA-216ENST00000607212 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
CTSA-216ENST00000607212 SPANXA2-OT1Q8N9U9 137 aa6.59□□□□□ -1.35
CTSA-216ENST00000607212 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
CTSA-216ENST00000607212 KRTAP5-9P26371 169 aa6.51□□□□□ -1.37
CTSA-216ENST00000607212 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
CTSA-216ENST00000607212 LOC101927531A0A1B0GV80 90 aa6.46□□□□□ -1.38
CTSA-216ENST00000607212 Q1T7F1 81 aa6.46□□□□□ -1.38
CTSA-216ENST00000607212 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.38
CTSA-216ENST00000607212 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
CTSA-216ENST00000607212 KMT2DO14686 5537 aa6.44□□□□□ -1.38
CTSA-216ENST00000607212 COA5Q86WW8 74 aa6.42□□□□□ -1.38
CTSA-216ENST00000607212 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
CTSA-216ENST00000607212 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
CTSA-216ENST00000607212 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
CTSA-216ENST00000607212 SPRR2EP22531 72 aa6.36□□□□□ -1.39
CTSA-216ENST00000607212 SPRR2BP35325 72 aa6.36□□□□□ -1.39
CTSA-216ENST00000607212 SPRR2AP35326 72 aa6.36□□□□□ -1.39
CTSA-216ENST00000607212 V9GYY9 64 aa6.36□□□□□ -1.39
CTSA-216ENST00000607212 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
CTSA-216ENST00000607212 A8MUN3 132 aa6.34□□□□□ -1.39
CTSA-216ENST00000607212 PSPHP1O15172 72 aa6.32□□□□□ -1.4
CTSA-216ENST00000607212 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
CTSA-216ENST00000607212 PRO0628Q9UI54 55 aa6.31□□□□□ -1.4
CTSA-216ENST00000607212 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
CTSA-216ENST00000607212 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
CTSA-216ENST00000607212 H0YAA0 97 aa6.28□□□□□ -1.4
CTSA-216ENST00000607212 ACYP2P14621 99 aa6.27□□□□□ -1.41
CTSA-216ENST00000607212 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
CTSA-216ENST00000607212 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
CTSA-216ENST00000607212 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
CTSA-216ENST00000607212 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
CTSA-216ENST00000607212 MT1XP80297 61 aa6.22□□□□□ -1.41
CTSA-216ENST00000607212 CHKB-CPT1BH3BT56 60 aa6.19□□□□□ -1.42
CTSA-216ENST00000607212 R4GN34 69 aa6.19□□□□□ -1.42
CTSA-216ENST00000607212 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
CTSA-216ENST00000607212 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
CTSA-216ENST00000607212 SPRR2DP22532 72 aa6.15□□□□□ -1.42
CTSA-216ENST00000607212 M0QZ58 72 aa6.14□□□□□ -1.43
CTSA-216ENST00000607212 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
CTSA-216ENST00000607212 A8MU10 97 aa6.11□□□□□ -1.43
CTSA-216ENST00000607212 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
CTSA-216ENST00000607212 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
CTSA-216ENST00000607212 A6NED7 52 aa6.09□□□□□ -1.43
CTSA-216ENST00000607212 P0C880 135 aa6.08□□□□□ -1.44
CTSA-216ENST00000607212 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
CTSA-216ENST00000607212 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
CTSA-216ENST00000607212 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
CTSA-216ENST00000607212 A0A1B0GU69 56 aa6.02□□□□□ -1.45
CTSA-216ENST00000607212 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
CTSA-216ENST00000607212 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
CTSA-216ENST00000607212 SPTSSBQ8NFR3 76 aa5.95□□□□□ -1.46
CTSA-216ENST00000607212 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
CTSA-216ENST00000607212 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
CTSA-216ENST00000607212 KRTAP3-2Q9BYR7 98 aa5.91□□□□□ -1.46
CTSA-216ENST00000607212 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
CTSA-216ENST00000607212 UQCR11O14957 56 aa5.88□□□□□ -1.47
CTSA-216ENST00000607212 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
CTSA-216ENST00000607212 SEC61GP60059 68 aa5.85□□□□□ -1.47
CTSA-216ENST00000607212 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
CTSA-216ENST00000607212 A0A1B0GU33 70 aa5.76□□□□□ -1.49
CTSA-216ENST00000607212 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
CTSA-216ENST00000607212 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
CTSA-216ENST00000607212 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
CTSA-216ENST00000607212 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
CTSA-216ENST00000607212 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
CTSA-216ENST00000607212 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms