RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 XP32Q5T750 250 aa8.37□□□□□ -1.07
CTSA-214ENST00000606788 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
CTSA-214ENST00000606788 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
CTSA-214ENST00000606788 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
CTSA-214ENST00000606788 HERC2O95714 4834 aa8.22□□□□□ -1.09
CTSA-214ENST00000606788 MIR22HGQ0VDD5 57 aa8.17□□□□□ -1.1
CTSA-214ENST00000606788 UQCR11O14957 56 aa8.16□□□□□ -1.1
CTSA-214ENST00000606788 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
CTSA-214ENST00000606788 J3QL48 77 aa8.13□□□□□ -1.11
CTSA-214ENST00000606788 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
CTSA-214ENST00000606788 A6NN06 94 aa8.06□□□□□ -1.12
CTSA-214ENST00000606788 MUC2Q02817 5179 aa8.04□□□□□ -1.12
CTSA-214ENST00000606788 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
CTSA-214ENST00000606788 A0A1B0GU33 70 aa8.03□□□□□ -1.12
CTSA-214ENST00000606788 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
CTSA-214ENST00000606788 H0YAA0 97 aa8.03□□□□□ -1.12
CTSA-214ENST00000606788 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
CTSA-214ENST00000606788 S4R3F8 94 aa8.03□□□□□ -1.12
CTSA-214ENST00000606788 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
CTSA-214ENST00000606788 HERC1Q15751 4861 aa7.97□□□□□ -1.13
CTSA-214ENST00000606788 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
CTSA-214ENST00000606788 BIRC6Q9NR09 4857 aa7.95□□□□□ -1.14
CTSA-214ENST00000606788 A0A0D9SG42 100 aa7.94□□□□□ -1.14
CTSA-214ENST00000606788 P0C880 135 aa7.91□□□□□ -1.14
CTSA-214ENST00000606788 PCLOQ9Y6V0 5065 aa7.91□□□□□ -1.14
CTSA-214ENST00000606788 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
CTSA-214ENST00000606788 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
CTSA-214ENST00000606788 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
CTSA-214ENST00000606788 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
CTSA-214ENST00000606788 SEC61BP60468 96 aaKnown RBP7.8□□□□□ -1.16
CTSA-214ENST00000606788 MUC17Q685J3 4493 aa7.79□□□□□ -1.16
CTSA-214ENST00000606788 LINC01554Q52M75 96 aa7.77□□□□□ -1.16
CTSA-214ENST00000606788 CSAG1Q6PB30 78 aa7.77□□□□□ -1.17
CTSA-214ENST00000606788 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
CTSA-214ENST00000606788 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
CTSA-214ENST00000606788 RNF213Q63HN8 5207 aa7.65□□□□□ -1.18
CTSA-214ENST00000606788 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
CTSA-214ENST00000606788 K7ERS5 55 aa7.63□□□□□ -1.19
CTSA-214ENST00000606788 HMCN2Q8NDA2 5059 aa7.62□□□□□ -1.19
CTSA-214ENST00000606788 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
CTSA-214ENST00000606788 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
CTSA-214ENST00000606788 M0QZ58 72 aa7.56□□□□□ -1.2
CTSA-214ENST00000606788 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
CTSA-214ENST00000606788 A0A0A0MQY5 61 aa7.52□□□□□ -1.21
CTSA-214ENST00000606788 R4GN34 69 aa7.51□□□□□ -1.21
CTSA-214ENST00000606788 KRTAP19-2Q3LHN2 52 aa7.49□□□□□ -1.21
CTSA-214ENST00000606788 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
CTSA-214ENST00000606788 ROMO1P60602 79 aa7.42□□□□□ -1.22
CTSA-214ENST00000606788 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
CTSA-214ENST00000606788 FLGP20930 4061 aaPredicted RBP7.39□□□□□ -1.23
CTSA-214ENST00000606788 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
CTSA-214ENST00000606788 M0R2T5 61 aa7.3□□□□□ -1.24
CTSA-214ENST00000606788 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
CTSA-214ENST00000606788 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
CTSA-214ENST00000606788 MT1HP80294 61 aa7.09□□□□□ -1.28
CTSA-214ENST00000606788 NDUFAF8A1L188 74 aa7.07□□□□□ -1.28
CTSA-214ENST00000606788 KRTAP10-10P60014 251 aa7□□□□□ -1.29
CTSA-214ENST00000606788 MT1FP04733 61 aa6.94□□□□□ -1.3
CTSA-214ENST00000606788 MT2AP02795 61 aa6.91□□□□□ -1.3
CTSA-214ENST00000606788 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
CTSA-214ENST00000606788 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
CTSA-214ENST00000606788 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
CTSA-214ENST00000606788 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
CTSA-214ENST00000606788 USH2AO75445 5202 aa6.76□□□□□ -1.33
CTSA-214ENST00000606788 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
CTSA-214ENST00000606788 TNP1P09430 55 aa6.7□□□□□ -1.34
CTSA-214ENST00000606788 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
CTSA-214ENST00000606788 MT1BP07438 61 aa6.58□□□□□ -1.36
CTSA-214ENST00000606788 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
CTSA-214ENST00000606788 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
CTSA-214ENST00000606788 KRTAP19-8Q3LI54 63 aa6.5□□□□□ -1.37
CTSA-214ENST00000606788 PP632Q6XCG6 107 aa6.49□□□□□ -1.37
CTSA-214ENST00000606788 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
CTSA-214ENST00000606788 KMT2DO14686 5537 aa6.47□□□□□ -1.37
CTSA-214ENST00000606788 MT1XP80297 61 aa6.47□□□□□ -1.37
CTSA-214ENST00000606788 KRTAP10-5P60370 271 aa6.46□□□□□ -1.37
CTSA-214ENST00000606788 LCE2BO14633 110 aa6.44□□□□□ -1.38
CTSA-214ENST00000606788 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.39
CTSA-214ENST00000606788 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
CTSA-214ENST00000606788 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
CTSA-214ENST00000606788 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
CTSA-214ENST00000606788 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
CTSA-214ENST00000606788 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
CTSA-214ENST00000606788 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
CTSA-214ENST00000606788 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
CTSA-214ENST00000606788 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
CTSA-214ENST00000606788 KRTAP8-1Q8IUC2 63 aa6.12□□□□□ -1.43
CTSA-214ENST00000606788 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
CTSA-214ENST00000606788 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
CTSA-214ENST00000606788 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
CTSA-214ENST00000606788 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
CTSA-214ENST00000606788 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
CTSA-214ENST00000606788 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
CTSA-214ENST00000606788 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
CTSA-214ENST00000606788 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
CTSA-214ENST00000606788 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
CTSA-214ENST00000606788 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
CTSA-214ENST00000606788 MT1EP04732 61 aa5.6□□□□□ -1.51
CTSA-214ENST00000606788 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
CTSA-214ENST00000606788 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms