RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 HERC1Q15751 4861 aa10.36□□□□□ -0.75
MMP28-201ENST00000605424 SEC61GP60059 68 aa10.35□□□□□ -0.75
MMP28-201ENST00000605424 UQCR11O14957 56 aa10.31□□□□□ -0.76
MMP28-201ENST00000605424 TPRXLQ17RH7 258 aa10.31□□□□□ -0.76
MMP28-201ENST00000605424 J3QL48 77 aa10.29□□□□□ -0.76
MMP28-201ENST00000605424 PMAIP1Q13794 54 aa10.29□□□□□ -0.76
MMP28-201ENST00000605424 SPATA8Q6RVD6 105 aa10.27□□□□□ -0.76
MMP28-201ENST00000605424 MIR22HGQ0VDD5 57 aa10.22□□□□□ -0.77
MMP28-201ENST00000605424 A6NN06 94 aa10.15□□□□□ -0.78
MMP28-201ENST00000605424 HMCN2Q8NDA2 5059 aa10.1□□□□□ -0.79
MMP28-201ENST00000605424 LPAP08519 4548 aa10.06□□□□□ -0.8
MMP28-201ENST00000605424 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
MMP28-201ENST00000605424 S4R3F8 94 aa10.06□□□□□ -0.8
MMP28-201ENST00000605424 A0A1B0GU33 70 aa10.05□□□□□ -0.8
MMP28-201ENST00000605424 H1FX-AS1Q4G0G2 97 aa10.03□□□□□ -0.8
MMP28-201ENST00000605424 KTN1-AS1Q86SY8 53 aa10.01□□□□□ -0.81
MMP28-201ENST00000605424 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
MMP28-201ENST00000605424 H0YAA0 97 aa9.95□□□□□ -0.82
MMP28-201ENST00000605424 LRP2P98164 4655 aa9.95□□□□□ -0.82
MMP28-201ENST00000605424 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
MMP28-201ENST00000605424 KRTAP10-6P60371 365 aaPredicted RBP9.86□□□□□ -0.83
MMP28-201ENST00000605424 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
MMP28-201ENST00000605424 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
MMP28-201ENST00000605424 UBR4Q5T4S7 5183 aa9.75□□□□□ -0.85
MMP28-201ENST00000605424 K7ERS5 55 aa9.7□□□□□ -0.86
MMP28-201ENST00000605424 P0C880 135 aa9.68□□□□□ -0.86
MMP28-201ENST00000605424 ADM2Q7Z4H4 148 aa9.68□□□□□ -0.86
MMP28-201ENST00000605424 MUC17Q685J3 4493 aa9.65□□□□□ -0.87
MMP28-201ENST00000605424 KRTAP13-4Q3LI77 160 aa9.64□□□□□ -0.87
MMP28-201ENST00000605424 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
MMP28-201ENST00000605424 RNF213Q63HN8 5207 aa9.59□□□□□ -0.87
MMP28-201ENST00000605424 MUC2Q02817 5179 aa9.57□□□□□ -0.88
MMP28-201ENST00000605424 M0QZ58 72 aa9.54□□□□□ -0.88
MMP28-201ENST00000605424 PRAC1Q96KF2 57 aa9.53□□□□□ -0.88
MMP28-201ENST00000605424 A0A0D9SG42 100 aa9.5□□□□□ -0.89
MMP28-201ENST00000605424 KRTAP19-2Q3LHN2 52 aa9.49□□□□□ -0.89
MMP28-201ENST00000605424 ROMO1P60602 79 aa9.36□□□□□ -0.91
MMP28-201ENST00000605424 KRTAP12-1P59990 96 aa9.33□□□□□ -0.92
MMP28-201ENST00000605424 KRTAP12-2P59991 146 aa9.32□□□□□ -0.92
MMP28-201ENST00000605424 R4GN34 69 aa9.31□□□□□ -0.92
MMP28-201ENST00000605424 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
MMP28-201ENST00000605424 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
MMP28-201ENST00000605424 LINC01554Q52M75 96 aa9.2□□□□□ -0.94
MMP28-201ENST00000605424 FAT4Q6V0I7 4981 aa9.19□□□□□ -0.94
MMP28-201ENST00000605424 FLGP20930 4061 aaPredicted RBP9.16□□□□□ -0.94
MMP28-201ENST00000605424 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
MMP28-201ENST00000605424 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
MMP28-201ENST00000605424 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
MMP28-201ENST00000605424 MT1HP80294 61 aa8.86□□□□□ -0.99
MMP28-201ENST00000605424 C10orf95Q9H7T3 257 aa8.84□□□□□ -1
MMP28-201ENST00000605424 M0R2T5 61 aa8.82□□□□□ -1
MMP28-201ENST00000605424 LCE2AQ5TA79 106 aaPredicted RBP8.81□□□□□ -1
MMP28-201ENST00000605424 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
MMP28-201ENST00000605424 SPRR2GQ9BYE4 73 aa8.73□□□□□ -1.01
MMP28-201ENST00000605424 KRTAP19-1Q8IUB9 90 aa8.63□□□□□ -1.03
MMP28-201ENST00000605424 MT2AP02795 61 aa8.61□□□□□ -1.03
MMP28-201ENST00000605424 KRTAP9-8Q9BYQ0 159 aa8.6□□□□□ -1.03
MMP28-201ENST00000605424 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
MMP28-201ENST00000605424 MT1FP04733 61 aa8.56□□□□□ -1.04
MMP28-201ENST00000605424 PLAC4Q8WY50 150 aa8.56□□□□□ -1.04
MMP28-201ENST00000605424 PP632Q6XCG6 107 aa8.52□□□□□ -1.04
MMP28-201ENST00000605424 TNP1P09430 55 aa8.46□□□□□ -1.06
MMP28-201ENST00000605424 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
MMP28-201ENST00000605424 KRTAP23-1A1A580 65 aa8.41□□□□□ -1.06
MMP28-201ENST00000605424 KRTAP15-1Q3LI76 137 aa8.31□□□□□ -1.08
MMP28-201ENST00000605424 KRTAP9-3Q9BYQ3 159 aa8.27□□□□□ -1.09
MMP28-201ENST00000605424 MT1BP07438 61 aa8.23□□□□□ -1.09
MMP28-201ENST00000605424 H3BS24 57 aa8.21□□□□□ -1.1
MMP28-201ENST00000605424 USH2AO75445 5202 aa8.1□□□□□ -1.11
MMP28-201ENST00000605424 KRTAP10-5P60370 271 aa8.09□□□□□ -1.11
MMP28-201ENST00000605424 LCE2BO14633 110 aa8.08□□□□□ -1.12
MMP28-201ENST00000605424 MT1XP80297 61 aa8.08□□□□□ -1.12
MMP28-201ENST00000605424 LCE2DQ5TA82 110 aaPredicted RBP8.08□□□□□ -1.12
MMP28-201ENST00000605424 KRTAP9-2Q9BYQ4 174 aa8.04□□□□□ -1.12
MMP28-201ENST00000605424 FSIP2Q5CZC0 6907 aa8.04□□□□□ -1.12
MMP28-201ENST00000605424 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
MMP28-201ENST00000605424 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
MMP28-201ENST00000605424 SSPOA2VEC9 5147 aa7.91□□□□□ -1.14
MMP28-201ENST00000605424 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
MMP28-201ENST00000605424 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
MMP28-201ENST00000605424 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
MMP28-201ENST00000605424 KRTAP10-7P60409 375 aaPredicted RBP7.78□□□□□ -1.16
MMP28-201ENST00000605424 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
MMP28-201ENST00000605424 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
MMP28-201ENST00000605424 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
MMP28-201ENST00000605424 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
MMP28-201ENST00000605424 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
MMP28-201ENST00000605424 KRTAP9-6A0A140TA67 174 aa7.62□□□□□ -1.19
MMP28-201ENST00000605424 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
MMP28-201ENST00000605424 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
MMP28-201ENST00000605424 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
MMP28-201ENST00000605424 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
MMP28-201ENST00000605424 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
MMP28-201ENST00000605424 KMT2DO14686 5537 aa7.24□□□□□ -1.25
MMP28-201ENST00000605424 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.26
MMP28-201ENST00000605424 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
MMP28-201ENST00000605424 KRTAP19-4Q3LI73 84 aa7.19□□□□□ -1.26
MMP28-201ENST00000605424 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
MMP28-201ENST00000605424 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
MMP28-201ENST00000605424 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms