RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 K7EIL1 84 aa2.99□□□□□ -1.93
COL4A3BP-207ENST00000604926 H1FX-AS1Q4G0G2 97 aa2.99□□□□□ -1.93
COL4A3BP-207ENST00000604926 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
COL4A3BP-207ENST00000604926 SPINK6Q6UWN8 80 aa2.98□□□□□ -1.93
COL4A3BP-207ENST00000604926 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
COL4A3BP-207ENST00000604926 UBE2DNLQ8IWF7 75 aa2.97□□□□□ -1.93
COL4A3BP-207ENST00000604926 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
COL4A3BP-207ENST00000604926 DNAH5Q8TE73 4624 aa2.96□□□□□ -1.94
COL4A3BP-207ENST00000604926 PKD1P98161 4303 aa2.95□□□□□ -1.94
COL4A3BP-207ENST00000604926 PRO0255Q9UI72 69 aa2.95□□□□□ -1.94
COL4A3BP-207ENST00000604926 SRRM2Q9UQ35 2752 aaKnown RBP2.95□□□□□ -1.94
COL4A3BP-207ENST00000604926 IGKV2D-30A0A075B6S6 120 aa2.94□□□□□ -1.94
COL4A3BP-207ENST00000604926 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
COL4A3BP-207ENST00000604926 DEFB4AO15263 64 aa2.94□□□□□ -1.94
COL4A3BP-207ENST00000604926 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
COL4A3BP-207ENST00000604926 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
COL4A3BP-207ENST00000604926 HYDINQ4G0P3 5121 aa2.92□□□□□ -1.94
COL4A3BP-207ENST00000604926 SPRR1AP35321 89 aa2.92□□□□□ -1.94
COL4A3BP-207ENST00000604926 APOBP04114 4563 aaKnown RBP2.91□□□□□ -1.94
COL4A3BP-207ENST00000604926 EPPK1P58107 5090 aaKnown RBP2.91□□□□□ -1.94
COL4A3BP-207ENST00000604926 CSMD3Q7Z407 3707 aa2.9□□□□□ -1.95
COL4A3BP-207ENST00000604926 COX6B2Q6YFQ2 88 aa2.9□□□□□ -1.95
COL4A3BP-207ENST00000604926 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.95
COL4A3BP-207ENST00000604926 A0A0D9SG42 100 aa2.89□□□□□ -1.95
COL4A3BP-207ENST00000604926 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
COL4A3BP-207ENST00000604926 APLNQ9ULZ1 77 aa2.89□□□□□ -1.95
COL4A3BP-207ENST00000604926 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
COL4A3BP-207ENST00000604926 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
COL4A3BP-207ENST00000604926 H3BNG1 76 aa2.83□□□□□ -1.96
COL4A3BP-207ENST00000604926 SPRR1BP22528 89 aa2.83□□□□□ -1.96
COL4A3BP-207ENST00000604926 COL7A1Q02388 2944 aa2.82□□□□□ -1.96
COL4A3BP-207ENST00000604926 DEFB135Q30KP9 77 aa2.81□□□□□ -1.96
COL4A3BP-207ENST00000604926 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
COL4A3BP-207ENST00000604926 KRTAP10-3P60369 221 aa2.81□□□□□ -1.96
COL4A3BP-207ENST00000604926 HERC1Q15751 4861 aa2.81□□□□□ -1.96
COL4A3BP-207ENST00000604926 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.96
COL4A3BP-207ENST00000604926 SPART-AS1P0CW21 52 aa2.77□□□□□ -1.97
COL4A3BP-207ENST00000604926 S4R3F8 94 aa2.77□□□□□ -1.97
COL4A3BP-207ENST00000604926 KRTAP13-2Q52LG2 175 aa2.76□□□□□ -1.97
COL4A3BP-207ENST00000604926 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
COL4A3BP-207ENST00000604926 KRTAP9-2Q9BYQ4 174 aa2.7□□□□□ -1.98
COL4A3BP-207ENST00000604926 KRTAP13-4Q3LI77 160 aa2.69□□□□□ -1.98
COL4A3BP-207ENST00000604926 LINC01556Q5JQF7 62 aa2.68□□□□□ -1.98
COL4A3BP-207ENST00000604926 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
COL4A3BP-207ENST00000604926 KRTAP10-11P60412 298 aa2.68□□□□□ -1.98
COL4A3BP-207ENST00000604926 KRTAP9-8Q9BYQ0 159 aa2.68□□□□□ -1.98
COL4A3BP-207ENST00000604926 HMCN2Q8NDA2 5059 aa2.66□□□□□ -1.98
COL4A3BP-207ENST00000604926 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
COL4A3BP-207ENST00000604926 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
COL4A3BP-207ENST00000604926 KRTAP10-2P60368 255 aa2.62□□□□□ -1.99
COL4A3BP-207ENST00000604926 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
COL4A3BP-207ENST00000604926 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
COL4A3BP-207ENST00000604926 KRTAP10-6P60371 365 aaPredicted RBP2.6□□□□□ -1.99
COL4A3BP-207ENST00000604926 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
COL4A3BP-207ENST00000604926 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
COL4A3BP-207ENST00000604926 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
COL4A3BP-207ENST00000604926 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
COL4A3BP-207ENST00000604926 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
COL4A3BP-207ENST00000604926 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
COL4A3BP-207ENST00000604926 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
COL4A3BP-207ENST00000604926 KRTAP10-1P60331 282 aa2.54□□□□□ -2
COL4A3BP-207ENST00000604926 LRP2P98164 4655 aa2.53□□□□□ -2
COL4A3BP-207ENST00000604926 C9orf92A6NGG3 77 aa2.51□□□□□ -2.01
COL4A3BP-207ENST00000604926 KRTAP1-4P0C5Y4 121 aa2.49□□□□□ -2.01
COL4A3BP-207ENST00000604926 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
COL4A3BP-207ENST00000604926 Q5VSD8 79 aa2.48□□□□□ -2.01
COL4A3BP-207ENST00000604926 KRTAP4-8Q9BYQ9 185 aa2.48□□□□□ -2.01
COL4A3BP-207ENST00000604926 KRTAP4-5Q9BYR2 181 aa2.46□□□□□ -2.02
COL4A3BP-207ENST00000604926 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
COL4A3BP-207ENST00000604926 KRTAP1-5Q9BYS1 174 aa2.46□□□□□ -2.02
COL4A3BP-207ENST00000604926 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.44□□□□□ -2.02
COL4A3BP-207ENST00000604926 KRTAP4-8A0A0G2JLE6 195 aa2.44□□□□□ -2.02
COL4A3BP-207ENST00000604926 KRTAP9-7A8MTY7 169 aa2.44□□□□□ -2.02
COL4A3BP-207ENST00000604926 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
COL4A3BP-207ENST00000604926 MT1HL1P0DM35 61 aa2.43□□□□□ -2.02
COL4A3BP-207ENST00000604926 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
COL4A3BP-207ENST00000604926 KRTAP4-7Q9BYR0 210 aa2.42□□□□□ -2.02
COL4A3BP-207ENST00000604926 M0QZ58 72 aa2.41□□□□□ -2.02
COL4A3BP-207ENST00000604926 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
COL4A3BP-207ENST00000604926 MUC2Q02817 5179 aa2.39□□□□□ -2.03
COL4A3BP-207ENST00000604926 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
COL4A3BP-207ENST00000604926 SMR3BP02814 79 aaPredicted RBP2.37□□□□□ -2.03
COL4A3BP-207ENST00000604926 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
COL4A3BP-207ENST00000604926 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
COL4A3BP-207ENST00000604926 LCE3BQ5TA77 95 aa2.35□□□□□ -2.03
COL4A3BP-207ENST00000604926 LPAP08519 4548 aa2.32□□□□□ -2.04
COL4A3BP-207ENST00000604926 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
COL4A3BP-207ENST00000604926 KRTAP19-4Q3LI73 84 aa2.29□□□□□ -2.04
COL4A3BP-207ENST00000604926 KRTAP19-6Q3LI70 58 aa2.28□□□□□ -2.04
COL4A3BP-207ENST00000604926 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
COL4A3BP-207ENST00000604926 LCE3CQ5T5A8 94 aa2.26□□□□□ -2.05
COL4A3BP-207ENST00000604926 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
COL4A3BP-207ENST00000604926 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
COL4A3BP-207ENST00000604926 TNP1P09430 55 aa2.25□□□□□ -2.05
COL4A3BP-207ENST00000604926 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
COL4A3BP-207ENST00000604926 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
COL4A3BP-207ENST00000604926 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
COL4A3BP-207ENST00000604926 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
COL4A3BP-207ENST00000604926 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
COL4A3BP-207ENST00000604926 KRTAP4-9Q9BYQ8 210 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms