RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 SPINK7P58062 85 aa8.04□□□□□ -1.12
CCDC12-211ENST00000604367 HERC2O95714 4834 aa8.03□□□□□ -1.12
CCDC12-211ENST00000604367 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
CCDC12-211ENST00000604367 ABCA13Q86UQ4 5058 aa7.98□□□□□ -1.13
CCDC12-211ENST00000604367 XP32Q5T750 250 aa7.98□□□□□ -1.13
CCDC12-211ENST00000604367 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
CCDC12-211ENST00000604367 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
CCDC12-211ENST00000604367 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
CCDC12-211ENST00000604367 A0A1B0GU69 56 aa7.86□□□□□ -1.15
CCDC12-211ENST00000604367 LRP2P98164 4655 aa7.85□□□□□ -1.15
CCDC12-211ENST00000604367 LPAP08519 4548 aa7.85□□□□□ -1.15
CCDC12-211ENST00000604367 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
CCDC12-211ENST00000604367 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
CCDC12-211ENST00000604367 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
CCDC12-211ENST00000604367 J3QL48 77 aa7.76□□□□□ -1.17
CCDC12-211ENST00000604367 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
CCDC12-211ENST00000604367 UQCR11O14957 56 aa7.64□□□□□ -1.19
CCDC12-211ENST00000604367 HERC1Q15751 4861 aa7.64□□□□□ -1.19
CCDC12-211ENST00000604367 ROMO1P60602 79 aa7.62□□□□□ -1.19
CCDC12-211ENST00000604367 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
CCDC12-211ENST00000604367 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
CCDC12-211ENST00000604367 S4R3F8 94 aa7.6□□□□□ -1.19
CCDC12-211ENST00000604367 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
CCDC12-211ENST00000604367 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
CCDC12-211ENST00000604367 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
CCDC12-211ENST00000604367 A0A1B0GU33 70 aa7.51□□□□□ -1.21
CCDC12-211ENST00000604367 H0YAA0 97 aa7.48□□□□□ -1.21
CCDC12-211ENST00000604367 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
CCDC12-211ENST00000604367 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
CCDC12-211ENST00000604367 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
CCDC12-211ENST00000604367 HMCN2Q8NDA2 5059 aa7.41□□□□□ -1.22
CCDC12-211ENST00000604367 P0C880 135 aa7.41□□□□□ -1.22
CCDC12-211ENST00000604367 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
CCDC12-211ENST00000604367 MUC2Q02817 5179 aa7.36□□□□□ -1.23
CCDC12-211ENST00000604367 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
CCDC12-211ENST00000604367 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
CCDC12-211ENST00000604367 A0A0D9SG42 100 aa7.26□□□□□ -1.25
CCDC12-211ENST00000604367 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
CCDC12-211ENST00000604367 LUZP6Q538Z0 58 aa7.23□□□□□ -1.25
CCDC12-211ENST00000604367 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
CCDC12-211ENST00000604367 K7ERS5 55 aa7.17□□□□□ -1.26
CCDC12-211ENST00000604367 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
CCDC12-211ENST00000604367 M0QZ58 72 aa7.09□□□□□ -1.27
CCDC12-211ENST00000604367 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
CCDC12-211ENST00000604367 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
CCDC12-211ENST00000604367 R4GN34 69 aa7.05□□□□□ -1.28
CCDC12-211ENST00000604367 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
CCDC12-211ENST00000604367 LORP23490 312 aaPredicted RBP7.05□□□□□ -1.28
CCDC12-211ENST00000604367 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
CCDC12-211ENST00000604367 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
CCDC12-211ENST00000604367 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
CCDC12-211ENST00000604367 KRTAP12-1P59990 96 aa7□□□□□ -1.29
CCDC12-211ENST00000604367 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
CCDC12-211ENST00000604367 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.31
CCDC12-211ENST00000604367 M0R2T5 61 aa6.85□□□□□ -1.31
CCDC12-211ENST00000604367 MT1HP80294 61 aa6.81□□□□□ -1.32
CCDC12-211ENST00000604367 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.33
CCDC12-211ENST00000604367 CAMK2N1Q7Z7J9 78 aa6.66□□□□□ -1.34
CCDC12-211ENST00000604367 MT2AP02795 61 aa6.61□□□□□ -1.35
CCDC12-211ENST00000604367 MT1FP04733 61 aa6.6□□□□□ -1.35
CCDC12-211ENST00000604367 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
CCDC12-211ENST00000604367 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
CCDC12-211ENST00000604367 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
CCDC12-211ENST00000604367 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
CCDC12-211ENST00000604367 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
CCDC12-211ENST00000604367 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
CCDC12-211ENST00000604367 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.4
CCDC12-211ENST00000604367 TNP1P09430 55 aa6.33□□□□□ -1.4
CCDC12-211ENST00000604367 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
CCDC12-211ENST00000604367 MT1BP07438 61 aa6.29□□□□□ -1.4
CCDC12-211ENST00000604367 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
CCDC12-211ENST00000604367 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
CCDC12-211ENST00000604367 MT1XP80297 61 aa6.17□□□□□ -1.42
CCDC12-211ENST00000604367 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
CCDC12-211ENST00000604367 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
CCDC12-211ENST00000604367 LCE2BO14633 110 aa6.15□□□□□ -1.43
CCDC12-211ENST00000604367 USH2AO75445 5202 aa6.11□□□□□ -1.43
CCDC12-211ENST00000604367 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
CCDC12-211ENST00000604367 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
CCDC12-211ENST00000604367 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
CCDC12-211ENST00000604367 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
CCDC12-211ENST00000604367 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
CCDC12-211ENST00000604367 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
CCDC12-211ENST00000604367 KMT2DO14686 5537 aa5.81□□□□□ -1.48
CCDC12-211ENST00000604367 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
CCDC12-211ENST00000604367 KRTAP9-2Q9BYQ4 174 aa5.79□□□□□ -1.48
CCDC12-211ENST00000604367 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
CCDC12-211ENST00000604367 INE1O15225 51 aa5.76□□□□□ -1.49
CCDC12-211ENST00000604367 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
CCDC12-211ENST00000604367 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
CCDC12-211ENST00000604367 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
CCDC12-211ENST00000604367 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
CCDC12-211ENST00000604367 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
CCDC12-211ENST00000604367 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
CCDC12-211ENST00000604367 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
CCDC12-211ENST00000604367 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
CCDC12-211ENST00000604367 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
CCDC12-211ENST00000604367 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
CCDC12-211ENST00000604367 KRTAP9-6A0A140TA67 174 aa5.37□□□□□ -1.55
CCDC12-211ENST00000604367 MT1EP04732 61 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms