RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
SQSTM1P1-201ENST00000603451 A8MUN3 132 aa4.62□□□□□ -1.67
SQSTM1P1-201ENST00000603451 SNURFQ9Y675 71 aa4.62□□□□□ -1.67
SQSTM1P1-201ENST00000603451 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
SQSTM1P1-201ENST00000603451 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
SQSTM1P1-201ENST00000603451 S4R3F8 94 aa4.57□□□□□ -1.68
SQSTM1P1-201ENST00000603451 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
SQSTM1P1-201ENST00000603451 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
SQSTM1P1-201ENST00000603451 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
SQSTM1P1-201ENST00000603451 MT2AP02795 61 aa4.52□□□□□ -1.69
SQSTM1P1-201ENST00000603451 LCA10Q71F78 164 aa4.52□□□□□ -1.69
SQSTM1P1-201ENST00000603451 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
SQSTM1P1-201ENST00000603451 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
SQSTM1P1-201ENST00000603451 MT1FP04733 61 aa4.48□□□□□ -1.69
SQSTM1P1-201ENST00000603451 SMIM26A0A096LP01 95 aa4.47□□□□□ -1.69
SQSTM1P1-201ENST00000603451 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
SQSTM1P1-201ENST00000603451 H0YAA0 97 aa4.45□□□□□ -1.7
SQSTM1P1-201ENST00000603451 ACYP2P14621 99 aa4.44□□□□□ -1.7
SQSTM1P1-201ENST00000603451 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
SQSTM1P1-201ENST00000603451 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.71
SQSTM1P1-201ENST00000603451 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
SQSTM1P1-201ENST00000603451 Q1T7F1 81 aa4.35□□□□□ -1.71
SQSTM1P1-201ENST00000603451 CHKB-CPT1BH3BT56 60 aa4.34□□□□□ -1.71
SQSTM1P1-201ENST00000603451 COA5Q86WW8 74 aa4.34□□□□□ -1.71
SQSTM1P1-201ENST00000603451 V9GYY9 64 aa4.34□□□□□ -1.71
SQSTM1P1-201ENST00000603451 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
SQSTM1P1-201ENST00000603451 LCE2BO14633 110 aa4.33□□□□□ -1.72
SQSTM1P1-201ENST00000603451 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
SQSTM1P1-201ENST00000603451 USH2AO75445 5202 aa4.32□□□□□ -1.72
SQSTM1P1-201ENST00000603451 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
SQSTM1P1-201ENST00000603451 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
SQSTM1P1-201ENST00000603451 ADM2Q7Z4H4 148 aa4.29□□□□□ -1.72
SQSTM1P1-201ENST00000603451 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
SQSTM1P1-201ENST00000603451 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
SQSTM1P1-201ENST00000603451 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
SQSTM1P1-201ENST00000603451 Q5VV11 94 aa4.23□□□□□ -1.73
SQSTM1P1-201ENST00000603451 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
SQSTM1P1-201ENST00000603451 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
SQSTM1P1-201ENST00000603451 R4GN34 69 aa4.22□□□□□ -1.73
SQSTM1P1-201ENST00000603451 P0C880 135 aa4.21□□□□□ -1.74
SQSTM1P1-201ENST00000603451 PSPHP1O15172 72 aa4.2□□□□□ -1.74
SQSTM1P1-201ENST00000603451 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
SQSTM1P1-201ENST00000603451 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
SQSTM1P1-201ENST00000603451 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
SQSTM1P1-201ENST00000603451 M0QZ58 72 aa4.17□□□□□ -1.74
SQSTM1P1-201ENST00000603451 MT1BP07438 61 aa4.17□□□□□ -1.74
SQSTM1P1-201ENST00000603451 SEC61GP60059 68 aa4.17□□□□□ -1.74
SQSTM1P1-201ENST00000603451 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
SQSTM1P1-201ENST00000603451 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
SQSTM1P1-201ENST00000603451 A6NED7 52 aa4.1□□□□□ -1.75
SQSTM1P1-201ENST00000603451 A6NN06 94 aa4.1□□□□□ -1.75
SQSTM1P1-201ENST00000603451 A0A1B0GU69 56 aa4.09□□□□□ -1.75
SQSTM1P1-201ENST00000603451 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
SQSTM1P1-201ENST00000603451 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
SQSTM1P1-201ENST00000603451 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
SQSTM1P1-201ENST00000603451 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
SQSTM1P1-201ENST00000603451 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
SQSTM1P1-201ENST00000603451 A0A1B0GU33 70 aa4.04□□□□□ -1.76
SQSTM1P1-201ENST00000603451 UQCR11O14957 56 aa4.02□□□□□ -1.77
SQSTM1P1-201ENST00000603451 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
SQSTM1P1-201ENST00000603451 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
SQSTM1P1-201ENST00000603451 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
SQSTM1P1-201ENST00000603451 SPATA8Q6RVD6 105 aa4.01□□□□□ -1.77
SQSTM1P1-201ENST00000603451 A8MU10 97 aa3.98□□□□□ -1.77
SQSTM1P1-201ENST00000603451 MT1XP80297 61 aa3.97□□□□□ -1.77
SQSTM1P1-201ENST00000603451 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
SQSTM1P1-201ENST00000603451 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
SQSTM1P1-201ENST00000603451 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
SQSTM1P1-201ENST00000603451 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
SQSTM1P1-201ENST00000603451 A0A0D9SG42 100 aa3.9□□□□□ -1.79
SQSTM1P1-201ENST00000603451 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
SQSTM1P1-201ENST00000603451 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
SQSTM1P1-201ENST00000603451 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
SQSTM1P1-201ENST00000603451 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
SQSTM1P1-201ENST00000603451 SPINT4Q6UDR6 99 aa3.85□□□□□ -1.79
SQSTM1P1-201ENST00000603451 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
SQSTM1P1-201ENST00000603451 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
SQSTM1P1-201ENST00000603451 K7ERS5 55 aa3.79□□□□□ -1.8
SQSTM1P1-201ENST00000603451 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
SQSTM1P1-201ENST00000603451 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
SQSTM1P1-201ENST00000603451 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
SQSTM1P1-201ENST00000603451 KMT2DO14686 5537 aa3.72□□□□□ -1.81
SQSTM1P1-201ENST00000603451 TNP1P09430 55 aa3.67□□□□□ -1.82
SQSTM1P1-201ENST00000603451 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
SQSTM1P1-201ENST00000603451 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
SQSTM1P1-201ENST00000603451 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
SQSTM1P1-201ENST00000603451 KRTAP4-8Q9BYQ9 185 aa3.66□□□□□ -1.82
SQSTM1P1-201ENST00000603451 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
SQSTM1P1-201ENST00000603451 NEBP20929 6669 aa3.66□□□□□ -1.82
SQSTM1P1-201ENST00000603451 ROMO1P60602 79 aa3.65□□□□□ -1.83
SQSTM1P1-201ENST00000603451 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
SQSTM1P1-201ENST00000603451 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
SQSTM1P1-201ENST00000603451 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
SQSTM1P1-201ENST00000603451 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
SQSTM1P1-201ENST00000603451 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
SQSTM1P1-201ENST00000603451 SPRR2EP22531 72 aa3.56□□□□□ -1.84
SQSTM1P1-201ENST00000603451 SPRR2BP35325 72 aa3.56□□□□□ -1.84
SQSTM1P1-201ENST00000603451 SPRR2AP35326 72 aa3.56□□□□□ -1.84
SQSTM1P1-201ENST00000603451 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
SQSTM1P1-201ENST00000603451 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms