RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
HIF3A-217ENST00000600236 MT1FP04733 61 aa5.63□□□□□ -1.51
HIF3A-217ENST00000600236 LOC101927531A0A1B0GV80 90 aa5.62□□□□□ -1.51
HIF3A-217ENST00000600236 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
HIF3A-217ENST00000600236 Q5W150 140 aa5.61□□□□□ -1.51
HIF3A-217ENST00000600236 SPANXA2-OT1Q8N9U9 137 aa5.61□□□□□ -1.51
HIF3A-217ENST00000600236 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
HIF3A-217ENST00000600236 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
HIF3A-217ENST00000600236 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
HIF3A-217ENST00000600236 LCE2BO14633 110 aa5.58□□□□□ -1.52
HIF3A-217ENST00000600236 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
HIF3A-217ENST00000600236 USH2AO75445 5202 aa5.56□□□□□ -1.52
HIF3A-217ENST00000600236 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
HIF3A-217ENST00000600236 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
HIF3A-217ENST00000600236 H1FX-AS1Q4G0G2 97 aa5.47□□□□□ -1.53
HIF3A-217ENST00000600236 SMIM26A0A096LP01 95 aa5.46□□□□□ -1.54
HIF3A-217ENST00000600236 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.54
HIF3A-217ENST00000600236 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
HIF3A-217ENST00000600236 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
HIF3A-217ENST00000600236 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
HIF3A-217ENST00000600236 DMAC1Q96GE9 116 aa5.43□□□□□ -1.54
HIF3A-217ENST00000600236 COA5Q86WW8 74 aa5.4□□□□□ -1.54
HIF3A-217ENST00000600236 ACYP2P14621 99 aa5.37□□□□□ -1.55
HIF3A-217ENST00000600236 A8MUN3 132 aa5.36□□□□□ -1.55
HIF3A-217ENST00000600236 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.56
HIF3A-217ENST00000600236 Q1T7F1 81 aa5.33□□□□□ -1.56
HIF3A-217ENST00000600236 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
HIF3A-217ENST00000600236 V9GYY9 64 aa5.32□□□□□ -1.56
HIF3A-217ENST00000600236 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
HIF3A-217ENST00000600236 CHKB-CPT1BH3BT56 60 aa5.26□□□□□ -1.57
HIF3A-217ENST00000600236 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
HIF3A-217ENST00000600236 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
HIF3A-217ENST00000600236 LINC01558Q9Y6Z2 57 aa5.25□□□□□ -1.57
HIF3A-217ENST00000600236 S4R3F8 94 aa5.25□□□□□ -1.57
HIF3A-217ENST00000600236 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
HIF3A-217ENST00000600236 A6NN06 94 aa5.19□□□□□ -1.58
HIF3A-217ENST00000600236 Q5VV11 94 aa5.19□□□□□ -1.58
HIF3A-217ENST00000600236 LCA10Q71F78 164 aa5.18□□□□□ -1.58
HIF3A-217ENST00000600236 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
HIF3A-217ENST00000600236 PRR15LQ9BU68 103 aa5.17□□□□□ -1.58
HIF3A-217ENST00000600236 PSPHP1O15172 72 aa5.16□□□□□ -1.58
HIF3A-217ENST00000600236 SPRR2GQ9BYE4 73 aa5.15□□□□□ -1.59
HIF3A-217ENST00000600236 MT1BP07438 61 aa5.13□□□□□ -1.59
HIF3A-217ENST00000600236 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
HIF3A-217ENST00000600236 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
HIF3A-217ENST00000600236 A0A1B0GU69 56 aa5.08□□□□□ -1.6
HIF3A-217ENST00000600236 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
HIF3A-217ENST00000600236 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
HIF3A-217ENST00000600236 A6NED7 52 aa5.02□□□□□ -1.61
HIF3A-217ENST00000600236 SEC61GP60059 68 aa5.02□□□□□ -1.61
HIF3A-217ENST00000600236 BRK1Q8WUW1 75 aa5.02□□□□□ -1.61
HIF3A-217ENST00000600236 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
HIF3A-217ENST00000600236 NEBP20929 6669 aa4.99□□□□□ -1.61
HIF3A-217ENST00000600236 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
HIF3A-217ENST00000600236 H0YAA0 97 aa4.98□□□□□ -1.61
HIF3A-217ENST00000600236 UQCR11O14957 56 aa4.97□□□□□ -1.61
HIF3A-217ENST00000600236 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
HIF3A-217ENST00000600236 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
HIF3A-217ENST00000600236 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
HIF3A-217ENST00000600236 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
HIF3A-217ENST00000600236 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
HIF3A-217ENST00000600236 A0A1B0GU33 70 aa4.91□□□□□ -1.62
HIF3A-217ENST00000600236 A8MU10 97 aa4.91□□□□□ -1.62
HIF3A-217ENST00000600236 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
HIF3A-217ENST00000600236 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
HIF3A-217ENST00000600236 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
HIF3A-217ENST00000600236 PLAC4Q8WY50 150 aa4.86□□□□□ -1.63
HIF3A-217ENST00000600236 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
HIF3A-217ENST00000600236 P0C880 135 aa4.84□□□□□ -1.63
HIF3A-217ENST00000600236 R4GN34 69 aa4.83□□□□□ -1.64
HIF3A-217ENST00000600236 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
HIF3A-217ENST00000600236 MT1XP80297 61 aa4.79□□□□□ -1.64
HIF3A-217ENST00000600236 KMT2DO14686 5537 aa4.79□□□□□ -1.64
HIF3A-217ENST00000600236 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
HIF3A-217ENST00000600236 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
HIF3A-217ENST00000600236 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
HIF3A-217ENST00000600236 M0QZ58 72 aa4.77□□□□□ -1.65
HIF3A-217ENST00000600236 SPRR2EP22531 72 aa4.76□□□□□ -1.65
HIF3A-217ENST00000600236 SPRR2BP35325 72 aa4.76□□□□□ -1.65
HIF3A-217ENST00000600236 SPRR2AP35326 72 aa4.76□□□□□ -1.65
HIF3A-217ENST00000600236 KRTAP8-1Q8IUC2 63 aa4.76□□□□□ -1.65
HIF3A-217ENST00000600236 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
HIF3A-217ENST00000600236 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
HIF3A-217ENST00000600236 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
HIF3A-217ENST00000600236 LINC01554Q52M75 96 aa4.7□□□□□ -1.66
HIF3A-217ENST00000600236 K7ERS5 55 aa4.67□□□□□ -1.66
HIF3A-217ENST00000600236 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
HIF3A-217ENST00000600236 A0A0D9SG42 100 aa4.64□□□□□ -1.67
HIF3A-217ENST00000600236 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
HIF3A-217ENST00000600236 SPRR2DP22532 72 aa4.62□□□□□ -1.67
HIF3A-217ENST00000600236 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
HIF3A-217ENST00000600236 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
HIF3A-217ENST00000600236 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
HIF3A-217ENST00000600236 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
HIF3A-217ENST00000600236 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
HIF3A-217ENST00000600236 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
HIF3A-217ENST00000600236 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
HIF3A-217ENST00000600236 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
HIF3A-217ENST00000600236 ROMO1P60602 79 aa4.51□□□□□ -1.69
HIF3A-217ENST00000600236 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms