RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 LINC01554Q52M75 96 aa8.46□□□□□ -1.05
SSR4P1-203ENST00000599569 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
SSR4P1-203ENST00000599569 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
SSR4P1-203ENST00000599569 UQCR11O14957 56 aa8.36□□□□□ -1.07
SSR4P1-203ENST00000599569 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
SSR4P1-203ENST00000599569 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
SSR4P1-203ENST00000599569 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
SSR4P1-203ENST00000599569 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
SSR4P1-203ENST00000599569 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
SSR4P1-203ENST00000599569 J3QL48 77 aa8.29□□□□□ -1.08
SSR4P1-203ENST00000599569 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
SSR4P1-203ENST00000599569 XP32Q5T750 250 aa8.27□□□□□ -1.09
SSR4P1-203ENST00000599569 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
SSR4P1-203ENST00000599569 A0A1B0GU33 70 aa8.12□□□□□ -1.11
SSR4P1-203ENST00000599569 H0YAA0 97 aa8.1□□□□□ -1.11
SSR4P1-203ENST00000599569 H1FX-AS1Q4G0G2 97 aa8.09□□□□□ -1.11
SSR4P1-203ENST00000599569 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
SSR4P1-203ENST00000599569 TPRXLQ17RH7 258 aa8.06□□□□□ -1.12
SSR4P1-203ENST00000599569 HERC1Q15751 4861 aa8.05□□□□□ -1.12
SSR4P1-203ENST00000599569 LRP2P98164 4655 aa8.03□□□□□ -1.12
SSR4P1-203ENST00000599569 S4R3F8 94 aa8.02□□□□□ -1.13
SSR4P1-203ENST00000599569 LPAP08519 4548 aa8.02□□□□□ -1.13
SSR4P1-203ENST00000599569 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
SSR4P1-203ENST00000599569 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
SSR4P1-203ENST00000599569 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
SSR4P1-203ENST00000599569 ROMO1P60602 79 aa7.89□□□□□ -1.15
SSR4P1-203ENST00000599569 HMCN2Q8NDA2 5059 aa7.88□□□□□ -1.15
SSR4P1-203ENST00000599569 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
SSR4P1-203ENST00000599569 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
SSR4P1-203ENST00000599569 K7ERS5 55 aa7.81□□□□□ -1.16
SSR4P1-203ENST00000599569 P0C880 135 aa7.81□□□□□ -1.16
SSR4P1-203ENST00000599569 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
SSR4P1-203ENST00000599569 A0A0D9SG42 100 aa7.72□□□□□ -1.17
SSR4P1-203ENST00000599569 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.17
SSR4P1-203ENST00000599569 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
SSR4P1-203ENST00000599569 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
SSR4P1-203ENST00000599569 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
SSR4P1-203ENST00000599569 M0QZ58 72 aa7.59□□□□□ -1.19
SSR4P1-203ENST00000599569 MUC2Q02817 5179 aa7.59□□□□□ -1.19
SSR4P1-203ENST00000599569 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
SSR4P1-203ENST00000599569 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
SSR4P1-203ENST00000599569 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
SSR4P1-203ENST00000599569 CRIPTQ9P021 101 aa7.5□□□□□ -1.21
SSR4P1-203ENST00000599569 KRTAP19-2Q3LHN2 52 aa7.49□□□□□ -1.21
SSR4P1-203ENST00000599569 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
SSR4P1-203ENST00000599569 R4GN34 69 aa7.44□□□□□ -1.22
SSR4P1-203ENST00000599569 LORP23490 312 aaPredicted RBP7.37□□□□□ -1.23
SSR4P1-203ENST00000599569 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
SSR4P1-203ENST00000599569 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
SSR4P1-203ENST00000599569 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
SSR4P1-203ENST00000599569 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
SSR4P1-203ENST00000599569 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
SSR4P1-203ENST00000599569 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
SSR4P1-203ENST00000599569 LUZP6Q538Z0 58 aa7.18□□□□□ -1.26
SSR4P1-203ENST00000599569 MT1HP80294 61 aa7.15□□□□□ -1.27
SSR4P1-203ENST00000599569 M0R2T5 61 aa7.07□□□□□ -1.28
SSR4P1-203ENST00000599569 CAMK2N1Q7Z7J9 78 aa7.03□□□□□ -1.28
SSR4P1-203ENST00000599569 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
SSR4P1-203ENST00000599569 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
SSR4P1-203ENST00000599569 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
SSR4P1-203ENST00000599569 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
SSR4P1-203ENST00000599569 MT2AP02795 61 aa6.83□□□□□ -1.32
SSR4P1-203ENST00000599569 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
SSR4P1-203ENST00000599569 MT1FP04733 61 aa6.8□□□□□ -1.32
SSR4P1-203ENST00000599569 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
SSR4P1-203ENST00000599569 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
SSR4P1-203ENST00000599569 TNP1P09430 55 aa6.76□□□□□ -1.33
SSR4P1-203ENST00000599569 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
SSR4P1-203ENST00000599569 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
SSR4P1-203ENST00000599569 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
SSR4P1-203ENST00000599569 MT1BP07438 61 aa6.51□□□□□ -1.37
SSR4P1-203ENST00000599569 LCE2BO14633 110 aa6.48□□□□□ -1.37
SSR4P1-203ENST00000599569 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
SSR4P1-203ENST00000599569 MT1XP80297 61 aa6.41□□□□□ -1.38
SSR4P1-203ENST00000599569 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
SSR4P1-203ENST00000599569 USH2AO75445 5202 aa6.34□□□□□ -1.39
SSR4P1-203ENST00000599569 LCE2DQ5TA82 110 aaPredicted RBP6.33□□□□□ -1.4
SSR4P1-203ENST00000599569 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
SSR4P1-203ENST00000599569 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
SSR4P1-203ENST00000599569 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
SSR4P1-203ENST00000599569 PRO2289Q9P1D8 64 aa6.26□□□□□ -1.41
SSR4P1-203ENST00000599569 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
SSR4P1-203ENST00000599569 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
SSR4P1-203ENST00000599569 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
SSR4P1-203ENST00000599569 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
SSR4P1-203ENST00000599569 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
SSR4P1-203ENST00000599569 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
SSR4P1-203ENST00000599569 INE1O15225 51 aa5.99□□□□□ -1.45
SSR4P1-203ENST00000599569 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.45
SSR4P1-203ENST00000599569 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
SSR4P1-203ENST00000599569 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
SSR4P1-203ENST00000599569 KMT2DO14686 5537 aa5.89□□□□□ -1.47
SSR4P1-203ENST00000599569 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
SSR4P1-203ENST00000599569 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
SSR4P1-203ENST00000599569 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
SSR4P1-203ENST00000599569 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
SSR4P1-203ENST00000599569 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
SSR4P1-203ENST00000599569 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
SSR4P1-203ENST00000599569 MT1EP04732 61 aa5.57□□□□□ -1.52
SSR4P1-203ENST00000599569 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms