RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 H0Y9P7 68 aa6.61□□□□□ -1.35
LIG1-218ENST00000599322 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
LIG1-218ENST00000599322 LCA10Q71F78 164 aa6.58□□□□□ -1.36
LIG1-218ENST00000599322 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
LIG1-218ENST00000599322 A0A087WVE0 104 aa6.56□□□□□ -1.36
LIG1-218ENST00000599322 MP68P56378 58 aa6.56□□□□□ -1.36
LIG1-218ENST00000599322 ANAPC13Q9BS18 74 aa6.54□□□□□ -1.36
LIG1-218ENST00000599322 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
LIG1-218ENST00000599322 A8MUN3 132 aa6.49□□□□□ -1.37
LIG1-218ENST00000599322 NDUFC1O43677 76 aa6.49□□□□□ -1.37
LIG1-218ENST00000599322 KLKP1Q107X0 134 aa6.44□□□□□ -1.38
LIG1-218ENST00000599322 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
LIG1-218ENST00000599322 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
LIG1-218ENST00000599322 H3BPC8 53 aa6.43□□□□□ -1.38
LIG1-218ENST00000599322 COX7CP15954 63 aa6.42□□□□□ -1.38
LIG1-218ENST00000599322 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
LIG1-218ENST00000599322 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
LIG1-218ENST00000599322 Q5VV11 94 aa6.41□□□□□ -1.38
LIG1-218ENST00000599322 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
LIG1-218ENST00000599322 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.38
LIG1-218ENST00000599322 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
LIG1-218ENST00000599322 TRAV7A0A075B6U4 112 aa6.36□□□□□ -1.39
LIG1-218ENST00000599322 CCDC179H3BU77 68 aa6.36□□□□□ -1.39
LIG1-218ENST00000599322 H0YAA0 97 aa6.34□□□□□ -1.39
LIG1-218ENST00000599322 A6NN06 94 aa6.31□□□□□ -1.4
LIG1-218ENST00000599322 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
LIG1-218ENST00000599322 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
LIG1-218ENST00000599322 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
LIG1-218ENST00000599322 NEBP20929 6669 aa6.27□□□□□ -1.41
LIG1-218ENST00000599322 MT1BP07438 61 aa6.26□□□□□ -1.41
LIG1-218ENST00000599322 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
LIG1-218ENST00000599322 TMEM258P61165 79 aa6.22□□□□□ -1.41
LIG1-218ENST00000599322 ACYP2P14621 99 aa6.21□□□□□ -1.42
LIG1-218ENST00000599322 SPTSSBQ8NFR3 76 aa6.19□□□□□ -1.42
LIG1-218ENST00000599322 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
LIG1-218ENST00000599322 R4GN34 69 aa6.18□□□□□ -1.42
LIG1-218ENST00000599322 CYSTM1Q9H1C7 97 aa6.17□□□□□ -1.42
LIG1-218ENST00000599322 H7BZZ5 65 aa6.16□□□□□ -1.42
LIG1-218ENST00000599322 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
LIG1-218ENST00000599322 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
LIG1-218ENST00000599322 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
LIG1-218ENST00000599322 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
LIG1-218ENST00000599322 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
LIG1-218ENST00000599322 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
LIG1-218ENST00000599322 M0QZ58 72 aa6.1□□□□□ -1.43
LIG1-218ENST00000599322 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
LIG1-218ENST00000599322 P0C880 135 aa6.08□□□□□ -1.44
LIG1-218ENST00000599322 KRTAP20-1Q3LI63 56 aa6.04□□□□□ -1.44
LIG1-218ENST00000599322 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
LIG1-218ENST00000599322 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
LIG1-218ENST00000599322 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
LIG1-218ENST00000599322 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
LIG1-218ENST00000599322 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
LIG1-218ENST00000599322 KMT2DO14686 5537 aa5.95□□□□□ -1.46
LIG1-218ENST00000599322 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
LIG1-218ENST00000599322 MT1XP80297 61 aa5.89□□□□□ -1.47
LIG1-218ENST00000599322 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
LIG1-218ENST00000599322 SEC61GP60059 68 aa5.87□□□□□ -1.47
LIG1-218ENST00000599322 COA5Q86WW8 74 aa5.83□□□□□ -1.48
LIG1-218ENST00000599322 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
LIG1-218ENST00000599322 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
LIG1-218ENST00000599322 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
LIG1-218ENST00000599322 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
LIG1-218ENST00000599322 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
LIG1-218ENST00000599322 Q1T7F1 81 aa5.75□□□□□ -1.49
LIG1-218ENST00000599322 V9GYY9 64 aa5.75□□□□□ -1.49
LIG1-218ENST00000599322 SPRR2EP22531 72 aa5.74□□□□□ -1.49
LIG1-218ENST00000599322 SPRR2BP35325 72 aa5.74□□□□□ -1.49
LIG1-218ENST00000599322 SPRR2AP35326 72 aa5.74□□□□□ -1.49
LIG1-218ENST00000599322 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
LIG1-218ENST00000599322 A0A1B0GU33 70 aa5.65□□□□□ -1.5
LIG1-218ENST00000599322 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
LIG1-218ENST00000599322 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.5
LIG1-218ENST00000599322 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
LIG1-218ENST00000599322 A0A0D9SG42 100 aa5.62□□□□□ -1.51
LIG1-218ENST00000599322 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
LIG1-218ENST00000599322 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
LIG1-218ENST00000599322 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
LIG1-218ENST00000599322 A0A1B0GU69 56 aa5.61□□□□□ -1.51
LIG1-218ENST00000599322 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
LIG1-218ENST00000599322 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
LIG1-218ENST00000599322 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
LIG1-218ENST00000599322 SPATA8Q6RVD6 105 aa5.58□□□□□ -1.52
LIG1-218ENST00000599322 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
LIG1-218ENST00000599322 SPRR2DP22532 72 aa5.55□□□□□ -1.52
LIG1-218ENST00000599322 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
LIG1-218ENST00000599322 PSPHP1O15172 72 aa5.51□□□□□ -1.53
LIG1-218ENST00000599322 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
LIG1-218ENST00000599322 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
LIG1-218ENST00000599322 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
LIG1-218ENST00000599322 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
LIG1-218ENST00000599322 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
LIG1-218ENST00000599322 A6NED7 52 aa5.38□□□□□ -1.55
LIG1-218ENST00000599322 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
LIG1-218ENST00000599322 A8MU10 97 aa5.36□□□□□ -1.55
LIG1-218ENST00000599322 UQCR11O14957 56 aa5.33□□□□□ -1.56
LIG1-218ENST00000599322 TNP1P09430 55 aa5.28□□□□□ -1.56
LIG1-218ENST00000599322 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
LIG1-218ENST00000599322 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
LIG1-218ENST00000599322 MT1EP04732 61 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms