RNA–Protein interactions for RNA: ENST00000597347.5

SOX2-OT-226, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,342 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-226ENST00000597347 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
SOX2-OT-226ENST00000597347 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
SOX2-OT-226ENST00000597347 IMUPQ9GZP8 106 aa4.72□□□□□ -1.65
SOX2-OT-226ENST00000597347 TRAV22A0A0B4J277 110 aa4.71□□□□□ -1.66
SOX2-OT-226ENST00000597347 UQCRQO14949 82 aa4.71□□□□□ -1.66
SOX2-OT-226ENST00000597347 MT1FP04733 61 aa4.7□□□□□ -1.66
SOX2-OT-226ENST00000597347 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
SOX2-OT-226ENST00000597347 OCR1Q9BZK8 76 aa4.68□□□□□ -1.66
SOX2-OT-226ENST00000597347 H0Y9P7 68 aa4.66□□□□□ -1.66
SOX2-OT-226ENST00000597347 ATOX1O00244 68 aa4.65□□□□□ -1.67
SOX2-OT-226ENST00000597347 LOC101927531A0A1B0GV80 90 aa4.64□□□□□ -1.67
SOX2-OT-226ENST00000597347 SCGB1A1P11684 91 aa4.64□□□□□ -1.67
SOX2-OT-226ENST00000597347 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
SOX2-OT-226ENST00000597347 FAM236AA0A1B0GUQ0 79 aa4.63□□□□□ -1.67
SOX2-OT-226ENST00000597347 FAM236BA0A1B0GV22 79 aa4.63□□□□□ -1.67
SOX2-OT-226ENST00000597347 C4orf26Q17RF5 130 aa4.63□□□□□ -1.67
SOX2-OT-226ENST00000597347 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
SOX2-OT-226ENST00000597347 MP68P56378 58 aa4.6□□□□□ -1.67
SOX2-OT-226ENST00000597347 C1orf64Q8NEQ6 169 aa4.6□□□□□ -1.67
SOX2-OT-226ENST00000597347 LINC00208Q96KT6 92 aa4.6□□□□□ -1.67
SOX2-OT-226ENST00000597347 H3BPC8 53 aa4.58□□□□□ -1.68
SOX2-OT-226ENST00000597347 SMIM20Q8N5G0 67 aa4.58□□□□□ -1.68
SOX2-OT-226ENST00000597347 TRAV7A0A075B6U4 112 aa4.57□□□□□ -1.68
SOX2-OT-226ENST00000597347 USH2AO75445 5202 aa4.56□□□□□ -1.68
SOX2-OT-226ENST00000597347 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
SOX2-OT-226ENST00000597347 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
SOX2-OT-226ENST00000597347 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
SOX2-OT-226ENST00000597347 S4R3F8 94 aa4.51□□□□□ -1.69
SOX2-OT-226ENST00000597347 SERP2Q8N6R1 65 aa4.49□□□□□ -1.69
SOX2-OT-226ENST00000597347 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
SOX2-OT-226ENST00000597347 LCA10Q71F78 164 aa4.48□□□□□ -1.69
SOX2-OT-226ENST00000597347 A8MUN3 132 aa4.47□□□□□ -1.69
SOX2-OT-226ENST00000597347 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
SOX2-OT-226ENST00000597347 C20orf197Q8N268 126 aa4.45□□□□□ -1.7
SOX2-OT-226ENST00000597347 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
SOX2-OT-226ENST00000597347 SNURFQ9Y675 71 aa4.45□□□□□ -1.7
SOX2-OT-226ENST00000597347 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
SOX2-OT-226ENST00000597347 H0YAA0 97 aa4.44□□□□□ -1.7
SOX2-OT-226ENST00000597347 DMAC1Q96GE9 116 aa4.44□□□□□ -1.7
SOX2-OT-226ENST00000597347 COX7CP15954 63 aa4.43□□□□□ -1.7
SOX2-OT-226ENST00000597347 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
SOX2-OT-226ENST00000597347 NDUFC1O43677 76 aa4.39□□□□□ -1.71
SOX2-OT-226ENST00000597347 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
SOX2-OT-226ENST00000597347 ANAPC13Q9BS18 74 aa4.38□□□□□ -1.71
SOX2-OT-226ENST00000597347 SPANXA2-OT1Q8N9U9 137 aa4.37□□□□□ -1.71
SOX2-OT-226ENST00000597347 ACYP2P14621 99 aa4.36□□□□□ -1.71
SOX2-OT-226ENST00000597347 MT1BP07438 61 aa4.35□□□□□ -1.71
SOX2-OT-226ENST00000597347 Q5VV11 94 aa4.35□□□□□ -1.71
SOX2-OT-226ENST00000597347 CYSTM1Q9H1C7 97 aa4.33□□□□□ -1.72
SOX2-OT-226ENST00000597347 H7BZZ5 65 aa4.31□□□□□ -1.72
SOX2-OT-226ENST00000597347 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
SOX2-OT-226ENST00000597347 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
SOX2-OT-226ENST00000597347 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
SOX2-OT-226ENST00000597347 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
SOX2-OT-226ENST00000597347 A6NN06 94 aa4.26□□□□□ -1.73
SOX2-OT-226ENST00000597347 CHKB-CPT1BH3BT56 60 aa4.26□□□□□ -1.73
SOX2-OT-226ENST00000597347 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
SOX2-OT-226ENST00000597347 SPTSSBQ8NFR3 76 aa4.25□□□□□ -1.73
SOX2-OT-226ENST00000597347 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
SOX2-OT-226ENST00000597347 COA5Q86WW8 74 aa4.23□□□□□ -1.73
SOX2-OT-226ENST00000597347 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
SOX2-OT-226ENST00000597347 P0C880 135 aa4.2□□□□□ -1.74
SOX2-OT-226ENST00000597347 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
SOX2-OT-226ENST00000597347 R4GN34 69 aa4.16□□□□□ -1.74
SOX2-OT-226ENST00000597347 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
SOX2-OT-226ENST00000597347 TMEM258P61165 79 aa4.14□□□□□ -1.75
SOX2-OT-226ENST00000597347 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
SOX2-OT-226ENST00000597347 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
SOX2-OT-226ENST00000597347 M0QZ58 72 aa4.1□□□□□ -1.75
SOX2-OT-226ENST00000597347 PCP4P48539 62 aa4.1□□□□□ -1.75
SOX2-OT-226ENST00000597347 MT1XP80297 61 aa4.08□□□□□ -1.76
SOX2-OT-226ENST00000597347 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
SOX2-OT-226ENST00000597347 SEC61GP60059 68 aa4.05□□□□□ -1.76
SOX2-OT-226ENST00000597347 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
SOX2-OT-226ENST00000597347 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
SOX2-OT-226ENST00000597347 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
SOX2-OT-226ENST00000597347 A0A1B0GU69 56 aa4□□□□□ -1.77
SOX2-OT-226ENST00000597347 NEBP20929 6669 aa3.99□□□□□ -1.77
SOX2-OT-226ENST00000597347 A0A1B0GU33 70 aa3.97□□□□□ -1.77
SOX2-OT-226ENST00000597347 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
SOX2-OT-226ENST00000597347 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.77
SOX2-OT-226ENST00000597347 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
SOX2-OT-226ENST00000597347 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
SOX2-OT-226ENST00000597347 PRR15LQ9BU68 103 aa3.94□□□□□ -1.78
SOX2-OT-226ENST00000597347 KMT2DO14686 5537 aa3.93□□□□□ -1.78
SOX2-OT-226ENST00000597347 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
SOX2-OT-226ENST00000597347 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
SOX2-OT-226ENST00000597347 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.78
SOX2-OT-226ENST00000597347 A0A0D9SG42 100 aa3.89□□□□□ -1.79
SOX2-OT-226ENST00000597347 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
SOX2-OT-226ENST00000597347 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
SOX2-OT-226ENST00000597347 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
SOX2-OT-226ENST00000597347 Q1T7F1 81 aa3.86□□□□□ -1.79
SOX2-OT-226ENST00000597347 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
SOX2-OT-226ENST00000597347 V9GYY9 64 aa3.86□□□□□ -1.79
SOX2-OT-226ENST00000597347 A8MU10 97 aa3.84□□□□□ -1.79
SOX2-OT-226ENST00000597347 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
SOX2-OT-226ENST00000597347 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
SOX2-OT-226ENST00000597347 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
SOX2-OT-226ENST00000597347 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms