RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 FAM236AA0A1B0GUQ0 79 aa8.41□□□□□ -1.06
IRF3-216ENST00000597180 FAM236BA0A1B0GV22 79 aa8.41□□□□□ -1.06
IRF3-216ENST00000597180 SMIM20Q8N5G0 67 aa8.39□□□□□ -1.07
IRF3-216ENST00000597180 TRAV7A0A075B6U4 112 aa8.37□□□□□ -1.07
IRF3-216ENST00000597180 USH2AO75445 5202 aa8.35□□□□□ -1.07
IRF3-216ENST00000597180 NDUFC1O43677 76 aa8.31□□□□□ -1.08
IRF3-216ENST00000597180 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
IRF3-216ENST00000597180 KRTAP19-1Q8IUB9 90 aa8.24□□□□□ -1.09
IRF3-216ENST00000597180 SSPOA2VEC9 5147 aa8.21□□□□□ -1.09
IRF3-216ENST00000597180 H0YAA0 97 aa8.21□□□□□ -1.1
IRF3-216ENST00000597180 SPRR2GQ9BYE4 73 aa8.18□□□□□ -1.1
IRF3-216ENST00000597180 SERP2Q8N6R1 65 aa8.17□□□□□ -1.1
IRF3-216ENST00000597180 KRTAP19-6Q3LI70 58 aa8.15□□□□□ -1.1
IRF3-216ENST00000597180 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
IRF3-216ENST00000597180 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
IRF3-216ENST00000597180 ACYP2P14621 99 aa8.1□□□□□ -1.11
IRF3-216ENST00000597180 C20orf197Q8N268 126 aa8.1□□□□□ -1.11
IRF3-216ENST00000597180 KRTAP19-8Q3LI54 63 aa8.09□□□□□ -1.11
IRF3-216ENST00000597180 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
IRF3-216ENST00000597180 MT1BP07438 61 aa8.05□□□□□ -1.12
IRF3-216ENST00000597180 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
IRF3-216ENST00000597180 Q5VV11 94 aa8.04□□□□□ -1.12
IRF3-216ENST00000597180 FCGBPQ9Y6R7 5405 aaPredicted RBP8.03□□□□□ -1.12
IRF3-216ENST00000597180 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
IRF3-216ENST00000597180 COX7CP15954 63 aa7.99□□□□□ -1.13
IRF3-216ENST00000597180 P0C880 135 aa7.95□□□□□ -1.14
IRF3-216ENST00000597180 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
IRF3-216ENST00000597180 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
IRF3-216ENST00000597180 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
IRF3-216ENST00000597180 R4GN34 69 aa7.86□□□□□ -1.15
IRF3-216ENST00000597180 A6NN06 94 aa7.83□□□□□ -1.16
IRF3-216ENST00000597180 CYSTM1Q9H1C7 97 aa7.83□□□□□ -1.16
IRF3-216ENST00000597180 H7BZZ5 65 aa7.82□□□□□ -1.16
IRF3-216ENST00000597180 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
IRF3-216ENST00000597180 ANAPC13Q9BS18 74 aa7.82□□□□□ -1.16
IRF3-216ENST00000597180 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
IRF3-216ENST00000597180 M0QZ58 72 aa7.81□□□□□ -1.16
IRF3-216ENST00000597180 COA5Q86WW8 74 aa7.78□□□□□ -1.16
IRF3-216ENST00000597180 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
IRF3-216ENST00000597180 MACF1Q9UPN3 7388 aaKnown RBP7.68□□□□□ -1.18
IRF3-216ENST00000597180 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
IRF3-216ENST00000597180 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
IRF3-216ENST00000597180 MT1XP80297 61 aa7.61□□□□□ -1.19
IRF3-216ENST00000597180 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
IRF3-216ENST00000597180 KRTAP6-3Q3LI67 103 aa7.56□□□□□ -1.2
IRF3-216ENST00000597180 SEC61GP60059 68 aa7.53□□□□□ -1.2
IRF3-216ENST00000597180 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
IRF3-216ENST00000597180 ATP5EP56381 51 aaPredicted RBP7.52□□□□□ -1.21
IRF3-216ENST00000597180 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
IRF3-216ENST00000597180 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
IRF3-216ENST00000597180 TMEM258P61165 79 aa7.41□□□□□ -1.22
IRF3-216ENST00000597180 A0A1B0GU33 70 aa7.4□□□□□ -1.22
IRF3-216ENST00000597180 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
IRF3-216ENST00000597180 A0A1B0GU69 56 aa7.37□□□□□ -1.23
IRF3-216ENST00000597180 KRTAP5-9P26371 169 aa7.34□□□□□ -1.23
IRF3-216ENST00000597180 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
IRF3-216ENST00000597180 A0A0D9SG42 100 aa7.29□□□□□ -1.24
IRF3-216ENST00000597180 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
IRF3-216ENST00000597180 CAMK2N1Q7Z7J9 78 aa7.25□□□□□ -1.25
IRF3-216ENST00000597180 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
IRF3-216ENST00000597180 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
IRF3-216ENST00000597180 PRR15LQ9BU68 103 aa7.22□□□□□ -1.25
IRF3-216ENST00000597180 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.26
IRF3-216ENST00000597180 KMT2DO14686 5537 aa7.2□□□□□ -1.26
IRF3-216ENST00000597180 SMIM26A0A096LP01 95 aa7.19□□□□□ -1.26
IRF3-216ENST00000597180 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
IRF3-216ENST00000597180 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
IRF3-216ENST00000597180 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
IRF3-216ENST00000597180 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
IRF3-216ENST00000597180 SPRR2FQ96RM1 72 aa7.14□□□□□ -1.27
IRF3-216ENST00000597180 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
IRF3-216ENST00000597180 A8MU10 97 aa7.12□□□□□ -1.27
IRF3-216ENST00000597180 NEBP20929 6669 aa7.07□□□□□ -1.28
IRF3-216ENST00000597180 UQCR11O14957 56 aa6.99□□□□□ -1.29
IRF3-216ENST00000597180 SPRR2EP22531 72 aa6.98□□□□□ -1.29
IRF3-216ENST00000597180 SPRR2BP35325 72 aa6.98□□□□□ -1.29
IRF3-216ENST00000597180 SPRR2AP35326 72 aa6.98□□□□□ -1.29
IRF3-216ENST00000597180 V9GYY9 64 aa6.96□□□□□ -1.3
IRF3-216ENST00000597180 LCE1AQ5T7P2 110 aa6.95□□□□□ -1.3
IRF3-216ENST00000597180 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
IRF3-216ENST00000597180 Q1T7F1 81 aa6.93□□□□□ -1.3
IRF3-216ENST00000597180 PCP4P48539 62 aa6.92□□□□□ -1.3
IRF3-216ENST00000597180 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
IRF3-216ENST00000597180 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
IRF3-216ENST00000597180 PSPHP1O15172 72 aa6.85□□□□□ -1.31
IRF3-216ENST00000597180 MIR22HGQ0VDD5 57 aa6.85□□□□□ -1.31
IRF3-216ENST00000597180 RPS28P62857 69 aaKnown RBP6.8□□□□□ -1.32
IRF3-216ENST00000597180 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
IRF3-216ENST00000597180 TNP1P09430 55 aa6.78□□□□□ -1.32
IRF3-216ENST00000597180 KRTAP2-3P0C7H8 128 aa6.76□□□□□ -1.33
IRF3-216ENST00000597180 KRTAP2-4Q9BYR9 128 aa6.76□□□□□ -1.33
IRF3-216ENST00000597180 SPRR2DP22532 72 aa6.74□□□□□ -1.33
IRF3-216ENST00000597180 MT1EP04732 61 aa6.73□□□□□ -1.33
IRF3-216ENST00000597180 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
IRF3-216ENST00000597180 K7ERS5 55 aa6.67□□□□□ -1.34
IRF3-216ENST00000597180 LCE3AQ5TA76 89 aa6.65□□□□□ -1.34
IRF3-216ENST00000597180 A6NED7 52 aa6.64□□□□□ -1.35
IRF3-216ENST00000597180 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
IRF3-216ENST00000597180 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
IRF3-216ENST00000597180 KRTAP2-2Q9BYT5 123 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms