RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 M0R2T5 61 aa10.12□□□□□ -0.79
IRF3-214ENST00000596788 ACYP2P14621 99 aa10.1□□□□□ -0.79
IRF3-214ENST00000596788 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
IRF3-214ENST00000596788 TMEM258P61165 79 aa10.03□□□□□ -0.8
IRF3-214ENST00000596788 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
IRF3-214ENST00000596788 KRTAP10-6P60371 365 aaPredicted RBP9.99□□□□□ -0.81
IRF3-214ENST00000596788 CSAG1Q6PB30 78 aa9.97□□□□□ -0.81
IRF3-214ENST00000596788 COA5Q86WW8 74 aa9.97□□□□□ -0.81
IRF3-214ENST00000596788 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
IRF3-214ENST00000596788 CHKB-CPT1BH3BT56 60 aa9.94□□□□□ -0.82
IRF3-214ENST00000596788 KRTAP9-8Q9BYQ0 159 aa9.86□□□□□ -0.83
IRF3-214ENST00000596788 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
IRF3-214ENST00000596788 MT2AP02795 61 aa9.81□□□□□ -0.84
IRF3-214ENST00000596788 MT1FP04733 61 aa9.75□□□□□ -0.85
IRF3-214ENST00000596788 H0YAA0 97 aa9.71□□□□□ -0.86
IRF3-214ENST00000596788 SERP1Q9Y6X1 66 aa9.71□□□□□ -0.86
IRF3-214ENST00000596788 KRTAP10-10P60014 251 aa9.66□□□□□ -0.86
IRF3-214ENST00000596788 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
IRF3-214ENST00000596788 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
IRF3-214ENST00000596788 P0C880 135 aa9.57□□□□□ -0.88
IRF3-214ENST00000596788 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
IRF3-214ENST00000596788 KRTAP9-3Q9BYQ3 159 aa9.52□□□□□ -0.89
IRF3-214ENST00000596788 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
IRF3-214ENST00000596788 SEC61GP60059 68 aa9.43□□□□□ -0.9
IRF3-214ENST00000596788 LINC01558Q9Y6Z2 57 aa9.43□□□□□ -0.9
IRF3-214ENST00000596788 A0A1B0GU69 56 aa9.41□□□□□ -0.9
IRF3-214ENST00000596788 LCE2DQ5TA82 110 aaPredicted RBP9.41□□□□□ -0.9
IRF3-214ENST00000596788 KRTAP19-1Q8IUB9 90 aa9.4□□□□□ -0.9
IRF3-214ENST00000596788 SMIM26A0A096LP01 95 aa9.38□□□□□ -0.91
IRF3-214ENST00000596788 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
IRF3-214ENST00000596788 LCE2BO14633 110 aa9.33□□□□□ -0.92
IRF3-214ENST00000596788 R4GN34 69 aa9.33□□□□□ -0.92
IRF3-214ENST00000596788 M0QZ58 72 aa9.32□□□□□ -0.92
IRF3-214ENST00000596788 PRR15LQ9BU68 103 aa9.31□□□□□ -0.92
IRF3-214ENST00000596788 Q1T7F1 81 aa9.3□□□□□ -0.92
IRF3-214ENST00000596788 KRTAP9-2Q9BYQ4 174 aa9.28□□□□□ -0.92
IRF3-214ENST00000596788 V9GYY9 64 aa9.28□□□□□ -0.92
IRF3-214ENST00000596788 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
IRF3-214ENST00000596788 A0A1B0GU33 70 aa9.24□□□□□ -0.93
IRF3-214ENST00000596788 KRTAP19-8Q3LI54 63 aa9.21□□□□□ -0.94
IRF3-214ENST00000596788 PSPHP1O15172 72 aa9.18□□□□□ -0.94
IRF3-214ENST00000596788 USH2AO75445 5202 aa9.14□□□□□ -0.95
IRF3-214ENST00000596788 LINC01554Q52M75 96 aa9.14□□□□□ -0.95
IRF3-214ENST00000596788 Q5VV11 94 aa9.14□□□□□ -0.95
IRF3-214ENST00000596788 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
IRF3-214ENST00000596788 MT1BP07438 61 aa9.13□□□□□ -0.95
IRF3-214ENST00000596788 UQCR11O14957 56 aa9.02□□□□□ -0.97
IRF3-214ENST00000596788 A0A0D9SG42 100 aa9.01□□□□□ -0.97
IRF3-214ENST00000596788 A6NN06 94 aa8.97□□□□□ -0.97
IRF3-214ENST00000596788 A8MU10 97 aa8.97□□□□□ -0.97
IRF3-214ENST00000596788 PLAC4Q8WY50 150 aa8.92□□□□□ -0.98
IRF3-214ENST00000596788 SSPOA2VEC9 5147 aa8.92□□□□□ -0.98
IRF3-214ENST00000596788 MIR22HGQ0VDD5 57 aa8.91□□□□□ -0.98
IRF3-214ENST00000596788 A6NED7 52 aa8.89□□□□□ -0.99
IRF3-214ENST00000596788 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
IRF3-214ENST00000596788 CRCT1Q9UGL9 99 aa8.88□□□□□ -0.99
IRF3-214ENST00000596788 KRTAP12-1P59990 96 aa8.86□□□□□ -0.99
IRF3-214ENST00000596788 KRTAP19-6Q3LI70 58 aa8.86□□□□□ -0.99
IRF3-214ENST00000596788 KRTAP12-2P59991 146 aa8.82□□□□□ -1
IRF3-214ENST00000596788 SPINT4Q6UDR6 99 aa8.81□□□□□ -1
IRF3-214ENST00000596788 KRTAP10-5P60370 271 aa8.75□□□□□ -1.01
IRF3-214ENST00000596788 MT1XP80297 61 aa8.74□□□□□ -1.01
IRF3-214ENST00000596788 KRTAP9-6A0A140TA67 174 aa8.72□□□□□ -1.01
IRF3-214ENST00000596788 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
IRF3-214ENST00000596788 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
IRF3-214ENST00000596788 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
IRF3-214ENST00000596788 FCGBPQ9Y6R7 5405 aaPredicted RBP8.61□□□□□ -1.03
IRF3-214ENST00000596788 K7ERS5 55 aa8.55□□□□□ -1.04
IRF3-214ENST00000596788 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
IRF3-214ENST00000596788 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
IRF3-214ENST00000596788 KRTAP10-7P60409 375 aaPredicted RBP8.36□□□□□ -1.07
IRF3-214ENST00000596788 PRO0628Q9UI54 55 aa8.3□□□□□ -1.08
IRF3-214ENST00000596788 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
IRF3-214ENST00000596788 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.26□□□□□ -1.09
IRF3-214ENST00000596788 TNP1P09430 55 aa8.19□□□□□ -1.1
IRF3-214ENST00000596788 MACF1Q9UPN3 7388 aaKnown RBP8.17□□□□□ -1.1
IRF3-214ENST00000596788 ROMO1P60602 79 aa8.16□□□□□ -1.1
IRF3-214ENST00000596788 KRTAP4-8A0A0G2JLE6 195 aa8.13□□□□□ -1.11
IRF3-214ENST00000596788 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
IRF3-214ENST00000596788 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
IRF3-214ENST00000596788 KMT2DO14686 5537 aa8.08□□□□□ -1.12
IRF3-214ENST00000596788 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
IRF3-214ENST00000596788 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
IRF3-214ENST00000596788 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
IRF3-214ENST00000596788 SYNE2Q8WXH0 6885 aaKnown RBP7.93□□□□□ -1.14
IRF3-214ENST00000596788 KRTAP9-7A8MTY7 169 aa7.92□□□□□ -1.14
IRF3-214ENST00000596788 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
IRF3-214ENST00000596788 KRTAP5-9P26371 169 aa7.88□□□□□ -1.15
IRF3-214ENST00000596788 SPRR2FQ96RM1 72 aa7.82□□□□□ -1.16
IRF3-214ENST00000596788 KRTAP23-1A1A580 65 aa7.8□□□□□ -1.16
IRF3-214ENST00000596788 KRTAP19-7Q3SYF9 63 aa7.8□□□□□ -1.16
IRF3-214ENST00000596788 KRTAP19-5Q3LI72 72 aa7.79□□□□□ -1.16
IRF3-214ENST00000596788 KTN1-AS1Q86SY8 53 aa7.7□□□□□ -1.18
IRF3-214ENST00000596788 MT1EP04732 61 aa7.69□□□□□ -1.18
IRF3-214ENST00000596788 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
IRF3-214ENST00000596788 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
IRF3-214ENST00000596788 MUC12Q9UKN1 5478 aa7.62□□□□□ -1.19
IRF3-214ENST00000596788 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
IRF3-214ENST00000596788 SPRR2EP22531 72 aa7.54□□□□□ -1.2
IRF3-214ENST00000596788 SPRR2BP35325 72 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms