RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
VRK3-211ENST00000596445 SNURFQ9Y675 71 aa3.96□□□□□ -1.78
VRK3-211ENST00000596445 MT1FP04733 61 aa3.95□□□□□ -1.78
VRK3-211ENST00000596445 KRTAP10-10P60014 251 aa3.95□□□□□ -1.78
VRK3-211ENST00000596445 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
VRK3-211ENST00000596445 ANAPC13Q9BS18 74 aa3.95□□□□□ -1.78
VRK3-211ENST00000596445 KRTAP3-2Q9BYR7 98 aa3.94□□□□□ -1.78
VRK3-211ENST00000596445 NDUFC1O43677 76 aa3.93□□□□□ -1.78
VRK3-211ENST00000596445 COX7CP15954 63 aa3.93□□□□□ -1.78
VRK3-211ENST00000596445 ACYP2P14621 99 aa3.9□□□□□ -1.79
VRK3-211ENST00000596445 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
VRK3-211ENST00000596445 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.79
VRK3-211ENST00000596445 H0YAA0 97 aa3.85□□□□□ -1.79
VRK3-211ENST00000596445 H7BZZ5 65 aa3.83□□□□□ -1.8
VRK3-211ENST00000596445 LCE2BO14633 110 aa3.83□□□□□ -1.8
VRK3-211ENST00000596445 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
VRK3-211ENST00000596445 CYSTM1Q9H1C7 97 aa3.83□□□□□ -1.8
VRK3-211ENST00000596445 CHKB-CPT1BH3BT56 60 aa3.82□□□□□ -1.8
VRK3-211ENST00000596445 SPTSSBQ8NFR3 76 aa3.82□□□□□ -1.8
VRK3-211ENST00000596445 CCDC179H3BU77 68 aa3.81□□□□□ -1.8
VRK3-211ENST00000596445 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
VRK3-211ENST00000596445 ADM2Q7Z4H4 148 aa3.8□□□□□ -1.8
VRK3-211ENST00000596445 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
VRK3-211ENST00000596445 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
VRK3-211ENST00000596445 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
VRK3-211ENST00000596445 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
VRK3-211ENST00000596445 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
VRK3-211ENST00000596445 COA5Q86WW8 74 aa3.77□□□□□ -1.81
VRK3-211ENST00000596445 USH2AO75445 5202 aa3.77□□□□□ -1.81
VRK3-211ENST00000596445 P0C880 135 aa3.74□□□□□ -1.81
VRK3-211ENST00000596445 TMEM258P61165 79 aa3.73□□□□□ -1.81
VRK3-211ENST00000596445 ATP5EP56381 51 aaPredicted RBP3.72□□□□□ -1.81
VRK3-211ENST00000596445 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
VRK3-211ENST00000596445 SSPOA2VEC9 5147 aa3.71□□□□□ -1.82
VRK3-211ENST00000596445 Q5VV11 94 aa3.7□□□□□ -1.82
VRK3-211ENST00000596445 R4GN34 69 aa3.7□□□□□ -1.82
VRK3-211ENST00000596445 MT1BP07438 61 aa3.68□□□□□ -1.82
VRK3-211ENST00000596445 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
VRK3-211ENST00000596445 M0QZ58 72 aa3.67□□□□□ -1.82
VRK3-211ENST00000596445 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
VRK3-211ENST00000596445 SEC61GP60059 68 aa3.64□□□□□ -1.83
VRK3-211ENST00000596445 SERP1Q9Y6X1 66 aa3.62□□□□□ -1.83
VRK3-211ENST00000596445 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
VRK3-211ENST00000596445 SMIM26A0A096LP01 95 aa3.61□□□□□ -1.83
VRK3-211ENST00000596445 LINC01554Q52M75 96 aa3.6□□□□□ -1.83
VRK3-211ENST00000596445 V9GYY9 64 aa3.6□□□□□ -1.83
VRK3-211ENST00000596445 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
VRK3-211ENST00000596445 A0A1B0GU69 56 aa3.57□□□□□ -1.84
VRK3-211ENST00000596445 A6NN06 94 aa3.57□□□□□ -1.84
VRK3-211ENST00000596445 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
VRK3-211ENST00000596445 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
VRK3-211ENST00000596445 A0A1B0GU33 70 aa3.55□□□□□ -1.84
VRK3-211ENST00000596445 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
VRK3-211ENST00000596445 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
VRK3-211ENST00000596445 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
VRK3-211ENST00000596445 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
VRK3-211ENST00000596445 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
VRK3-211ENST00000596445 MT1XP80297 61 aa3.5□□□□□ -1.85
VRK3-211ENST00000596445 A0A0D9SG42 100 aa3.48□□□□□ -1.85
VRK3-211ENST00000596445 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
VRK3-211ENST00000596445 PMAIP1Q13794 54 aa3.47□□□□□ -1.85
VRK3-211ENST00000596445 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
VRK3-211ENST00000596445 Q1T7F1 81 aa3.44□□□□□ -1.86
VRK3-211ENST00000596445 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
VRK3-211ENST00000596445 UQCR11O14957 56 aa3.42□□□□□ -1.86
VRK3-211ENST00000596445 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
VRK3-211ENST00000596445 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
VRK3-211ENST00000596445 A8MU10 97 aa3.41□□□□□ -1.86
VRK3-211ENST00000596445 SPINT4Q6UDR6 99 aa3.41□□□□□ -1.86
VRK3-211ENST00000596445 PSPHP1O15172 72 aa3.4□□□□□ -1.87
VRK3-211ENST00000596445 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
VRK3-211ENST00000596445 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
VRK3-211ENST00000596445 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
VRK3-211ENST00000596445 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
VRK3-211ENST00000596445 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
VRK3-211ENST00000596445 KRTAP10-12P60413 245 aa3.34□□□□□ -1.87
VRK3-211ENST00000596445 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
VRK3-211ENST00000596445 KMT2DO14686 5537 aa3.3□□□□□ -1.88
VRK3-211ENST00000596445 A6NED7 52 aa3.29□□□□□ -1.88
VRK3-211ENST00000596445 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
VRK3-211ENST00000596445 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
VRK3-211ENST00000596445 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
VRK3-211ENST00000596445 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
VRK3-211ENST00000596445 K7ERS5 55 aa3.26□□□□□ -1.89
VRK3-211ENST00000596445 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
VRK3-211ENST00000596445 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
VRK3-211ENST00000596445 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
VRK3-211ENST00000596445 TNP1P09430 55 aa3.21□□□□□ -1.9
VRK3-211ENST00000596445 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
VRK3-211ENST00000596445 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
VRK3-211ENST00000596445 SPRR2EP22531 72 aa3.14□□□□□ -1.91
VRK3-211ENST00000596445 SPRR2BP35325 72 aa3.14□□□□□ -1.91
VRK3-211ENST00000596445 SPRR2AP35326 72 aa3.14□□□□□ -1.91
VRK3-211ENST00000596445 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
VRK3-211ENST00000596445 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
VRK3-211ENST00000596445 NEBP20929 6669 aa3.12□□□□□ -1.91
VRK3-211ENST00000596445 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
VRK3-211ENST00000596445 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
VRK3-211ENST00000596445 H3BS24 57 aa3.1□□□□□ -1.91
VRK3-211ENST00000596445 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms