RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 PCLOQ9Y6V0 5065 aa11.95□□□□□ -0.5
SPTBN4-209ENST00000596411 MT1HL1P0DM35 61 aa11.91□□□□□ -0.5
SPTBN4-209ENST00000596411 HERC2O95714 4834 aa11.9□□□□□ -0.5
SPTBN4-209ENST00000596411 A0A1B0GU33 70 aa11.89□□□□□ -0.51
SPTBN4-209ENST00000596411 H0YAA0 97 aa11.88□□□□□ -0.51
SPTBN4-209ENST00000596411 H1FX-AS1Q4G0G2 97 aa11.88□□□□□ -0.51
SPTBN4-209ENST00000596411 RBM12B-AS1Q9P1G2 102 aa11.87□□□□□ -0.51
SPTBN4-209ENST00000596411 KRTAP3-3Q9BYR6 98 aa11.76□□□□□ -0.53
SPTBN4-209ENST00000596411 DMBT1Q9UGM3 2413 aaPredicted RBP11.72□□□□□ -0.53
SPTBN4-209ENST00000596411 TPRXLQ17RH7 258 aa11.7□□□□□ -0.54
SPTBN4-209ENST00000596411 S4R3F8 94 aa11.68□□□□□ -0.54
SPTBN4-209ENST00000596411 KIAA1109Q2LD37 5005 aa11.68□□□□□ -0.54
SPTBN4-209ENST00000596411 PRAC1Q96KF2 57 aa11.66□□□□□ -0.54
SPTBN4-209ENST00000596411 ADM2Q7Z4H4 148 aa11.65□□□□□ -0.54
SPTBN4-209ENST00000596411 KRTAP10-6P60371 365 aaPredicted RBP11.62□□□□□ -0.55
SPTBN4-209ENST00000596411 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
SPTBN4-209ENST00000596411 MYCBP2O75592 4640 aa11.54□□□□□ -0.56
SPTBN4-209ENST00000596411 K7ERS5 55 aa11.5□□□□□ -0.57
SPTBN4-209ENST00000596411 ABCA13Q86UQ4 5058 aa11.45□□□□□ -0.58
SPTBN4-209ENST00000596411 CSAG1Q6PB30 78 aa11.4□□□□□ -0.58
SPTBN4-209ENST00000596411 KRTAP13-4Q3LI77 160 aa11.39□□□□□ -0.59
SPTBN4-209ENST00000596411 LINC01554Q52M75 96 aa11.35□□□□□ -0.59
SPTBN4-209ENST00000596411 P0C880 135 aa11.33□□□□□ -0.6
SPTBN4-209ENST00000596411 KRTAP4-5Q9BYR2 181 aa11.31□□□□□ -0.6
SPTBN4-209ENST00000596411 LRP2P98164 4655 aa11.27□□□□□ -0.61
SPTBN4-209ENST00000596411 KRTAP25-1Q3LHN0 102 aa11.24□□□□□ -0.61
SPTBN4-209ENST00000596411 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
SPTBN4-209ENST00000596411 HERC1Q15751 4861 aa11.2□□□□□ -0.62
SPTBN4-209ENST00000596411 ROMO1P60602 79 aa11.19□□□□□ -0.62
SPTBN4-209ENST00000596411 LPAP08519 4548 aa11.19□□□□□ -0.62
SPTBN4-209ENST00000596411 A0A0D9SG42 100 aa11.17□□□□□ -0.62
SPTBN4-209ENST00000596411 M0QZ58 72 aa11.15□□□□□ -0.63
SPTBN4-209ENST00000596411 J3QL48 77 aa11.03□□□□□ -0.64
SPTBN4-209ENST00000596411 KRTAP12-1P59990 96 aa11.02□□□□□ -0.65
SPTBN4-209ENST00000596411 KRTAP12-2P59991 146 aa11.01□□□□□ -0.65
SPTBN4-209ENST00000596411 MUC17Q685J3 4493 aa10.96□□□□□ -0.65
SPTBN4-209ENST00000596411 KRTAP4-1Q9BYQ7 146 aa10.93□□□□□ -0.66
SPTBN4-209ENST00000596411 KRTAP19-2Q3LHN2 52 aa10.87□□□□□ -0.67
SPTBN4-209ENST00000596411 SPINT4Q6UDR6 99 aa10.85□□□□□ -0.67
SPTBN4-209ENST00000596411 CRIPTQ9P021 101 aa10.85□□□□□ -0.67
SPTBN4-209ENST00000596411 R4GN34 69 aa10.78□□□□□ -0.68
SPTBN4-209ENST00000596411 UBR4Q5T4S7 5183 aa10.74□□□□□ -0.69
SPTBN4-209ENST00000596411 LORP23490 312 aaPredicted RBP10.61□□□□□ -0.71
SPTBN4-209ENST00000596411 C10orf95Q9H7T3 257 aa10.6□□□□□ -0.71
SPTBN4-209ENST00000596411 HMCN2Q8NDA2 5059 aa10.49□□□□□ -0.73
SPTBN4-209ENST00000596411 FLGP20930 4061 aaPredicted RBP10.45□□□□□ -0.74
SPTBN4-209ENST00000596411 RNF213Q63HN8 5207 aa10.27□□□□□ -0.77
SPTBN4-209ENST00000596411 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
SPTBN4-209ENST00000596411 KRTAP15-1Q3LI76 137 aa10.2□□□□□ -0.78
SPTBN4-209ENST00000596411 CAMK2N1Q7Z7J9 78 aa10.18□□□□□ -0.78
SPTBN4-209ENST00000596411 MUC2Q02817 5179 aa10.11□□□□□ -0.79
SPTBN4-209ENST00000596411 PP632Q6XCG6 107 aa10.1□□□□□ -0.79
SPTBN4-209ENST00000596411 SPRR2GQ9BYE4 73 aa10.02□□□□□ -0.8
SPTBN4-209ENST00000596411 MT1HP80294 61 aa9.95□□□□□ -0.82
SPTBN4-209ENST00000596411 KRTAP23-1A1A580 65 aa9.93□□□□□ -0.82
SPTBN4-209ENST00000596411 H3BS24 57 aa9.91□□□□□ -0.82
SPTBN4-209ENST00000596411 KRTAP19-1Q8IUB9 90 aa9.89□□□□□ -0.83
SPTBN4-209ENST00000596411 TNP1P09430 55 aa9.87□□□□□ -0.83
SPTBN4-209ENST00000596411 M0R2T5 61 aa9.83□□□□□ -0.84
SPTBN4-209ENST00000596411 PLAC4Q8WY50 150 aa9.83□□□□□ -0.84
SPTBN4-209ENST00000596411 MT2AP02795 61 aa9.76□□□□□ -0.85
SPTBN4-209ENST00000596411 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
SPTBN4-209ENST00000596411 MT1FP04733 61 aa9.72□□□□□ -0.85
SPTBN4-209ENST00000596411 KRTAP9-8Q9BYQ0 159 aa9.72□□□□□ -0.85
SPTBN4-209ENST00000596411 NDUFAF8A1L188 74 aa9.72□□□□□ -0.85
SPTBN4-209ENST00000596411 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.86
SPTBN4-209ENST00000596411 KRTAP10-10P60014 251 aa9.66□□□□□ -0.86
SPTBN4-209ENST00000596411 KRTAP19-8Q3LI54 63 aa9.64□□□□□ -0.87
SPTBN4-209ENST00000596411 KRTAP9-6A0A140TA67 174 aa9.63□□□□□ -0.87
SPTBN4-209ENST00000596411 MT1BP07438 61 aa9.42□□□□□ -0.9
SPTBN4-209ENST00000596411 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
SPTBN4-209ENST00000596411 SPRR5A0A1B0GTR4 108 aa9.36□□□□□ -0.91
SPTBN4-209ENST00000596411 KRTAP9-3Q9BYQ3 159 aa9.34□□□□□ -0.91
SPTBN4-209ENST00000596411 LUZP6Q538Z0 58 aa9.33□□□□□ -0.92
SPTBN4-209ENST00000596411 KRTAP10-5P60370 271 aa9.3□□□□□ -0.92
SPTBN4-209ENST00000596411 MT1XP80297 61 aa9.3□□□□□ -0.92
SPTBN4-209ENST00000596411 LCE3AQ5TA76 89 aa9.3□□□□□ -0.92
SPTBN4-209ENST00000596411 KRTAP8-1Q8IUC2 63 aa9.22□□□□□ -0.93
SPTBN4-209ENST00000596411 FSIP2Q5CZC0 6907 aa9.19□□□□□ -0.94
SPTBN4-209ENST00000596411 CRCT1Q9UGL9 99 aa9.11□□□□□ -0.95
SPTBN4-209ENST00000596411 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
SPTBN4-209ENST00000596411 KRTAP10-12P60413 245 aa9.06□□□□□ -0.96
SPTBN4-209ENST00000596411 PRO2289Q9P1D8 64 aa9.06□□□□□ -0.96
SPTBN4-209ENST00000596411 KRTAP10-7P60409 375 aaPredicted RBP8.94□□□□□ -0.98
SPTBN4-209ENST00000596411 LCE2BO14633 110 aa8.91□□□□□ -0.98
SPTBN4-209ENST00000596411 KRTAP12-3P60328 96 aa8.91□□□□□ -0.98
SPTBN4-209ENST00000596411 A0A0A0MQY5 61 aa8.74□□□□□ -1.01
SPTBN4-209ENST00000596411 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
SPTBN4-209ENST00000596411 KRTAP19-5Q3LI72 72 aa8.56□□□□□ -1.04
SPTBN4-209ENST00000596411 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.5□□□□□ -1.05
SPTBN4-209ENST00000596411 LCE3CQ5T5A8 94 aa8.4□□□□□ -1.07
SPTBN4-209ENST00000596411 USH2AO75445 5202 aa8.36□□□□□ -1.07
SPTBN4-209ENST00000596411 KRTAP4-8A0A0G2JLE6 195 aa8.35□□□□□ -1.07
SPTBN4-209ENST00000596411 KRTAP4-8Q9BYQ9 185 aa8.35□□□□□ -1.07
SPTBN4-209ENST00000596411 KRTAP19-4Q3LI73 84 aa8.33□□□□□ -1.08
SPTBN4-209ENST00000596411 KRTAP19-7Q3SYF9 63 aa8.3□□□□□ -1.08
SPTBN4-209ENST00000596411 SSPOA2VEC9 5147 aa8.28□□□□□ -1.08
SPTBN4-209ENST00000596411 FCGBPQ9Y6R7 5405 aaPredicted RBP8.21□□□□□ -1.09
SPTBN4-209ENST00000596411 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
SPTBN4-209ENST00000596411 SYNE2Q8WXH0 6885 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms