RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
DDX49-204ENST00000595858 SPINK7P58062 85 aa7.68□□□□□ -1.18
DDX49-204ENST00000595858 LCE2CQ5TA81 110 aa7.66□□□□□ -1.18
DDX49-204ENST00000595858 ACYP2P14621 99 aa7.64□□□□□ -1.19
DDX49-204ENST00000595858 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
DDX49-204ENST00000595858 A6NED7 52 aa7.6□□□□□ -1.19
DDX49-204ENST00000595858 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
DDX49-204ENST00000595858 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
DDX49-204ENST00000595858 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
DDX49-204ENST00000595858 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
DDX49-204ENST00000595858 C7orf65Q6ZTY9 151 aa7.58□□□□□ -1.2
DDX49-204ENST00000595858 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
DDX49-204ENST00000595858 CDC42SE1Q9NRR8 79 aa7.56□□□□□ -1.2
DDX49-204ENST00000595858 PMAIP1Q13794 54 aa7.54□□□□□ -1.2
DDX49-204ENST00000595858 LCA10Q71F78 164 aa7.54□□□□□ -1.2
DDX49-204ENST00000595858 MT1HP80294 61 aa7.53□□□□□ -1.2
DDX49-204ENST00000595858 A8MU10 97 aa7.51□□□□□ -1.21
DDX49-204ENST00000595858 FLGP20930 4061 aaPredicted RBP7.46□□□□□ -1.22
DDX49-204ENST00000595858 SPTSSBQ8NFR3 76 aa7.45□□□□□ -1.22
DDX49-204ENST00000595858 M0R2T5 61 aa7.42□□□□□ -1.22
DDX49-204ENST00000595858 A0A1B0GU69 56 aa7.39□□□□□ -1.23
DDX49-204ENST00000595858 A6NN06 94 aa7.39□□□□□ -1.23
DDX49-204ENST00000595858 KTN1-AS1Q86SY8 53 aa7.38□□□□□ -1.23
DDX49-204ENST00000595858 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
DDX49-204ENST00000595858 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
DDX49-204ENST00000595858 KRTAP10-6P60371 365 aaPredicted RBP7.33□□□□□ -1.24
DDX49-204ENST00000595858 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
DDX49-204ENST00000595858 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
DDX49-204ENST00000595858 SEC61GP60059 68 aa7.29□□□□□ -1.24
DDX49-204ENST00000595858 UQCR11O14957 56 aa7.28□□□□□ -1.24
DDX49-204ENST00000595858 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
DDX49-204ENST00000595858 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
DDX49-204ENST00000595858 S4R3F8 94 aa7.19□□□□□ -1.26
DDX49-204ENST00000595858 MT2AP02795 61 aa7.12□□□□□ -1.27
DDX49-204ENST00000595858 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
DDX49-204ENST00000595858 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
DDX49-204ENST00000595858 MT1FP04733 61 aa7.07□□□□□ -1.28
DDX49-204ENST00000595858 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
DDX49-204ENST00000595858 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
DDX49-204ENST00000595858 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
DDX49-204ENST00000595858 A0A1B0GU33 70 aa7□□□□□ -1.29
DDX49-204ENST00000595858 H0YAA0 97 aa6.97□□□□□ -1.29
DDX49-204ENST00000595858 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.3
DDX49-204ENST00000595858 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
DDX49-204ENST00000595858 ADM2Q7Z4H4 148 aa6.93□□□□□ -1.3
DDX49-204ENST00000595858 LCE2BO14633 110 aa6.84□□□□□ -1.31
DDX49-204ENST00000595858 K7ERS5 55 aa6.83□□□□□ -1.32
DDX49-204ENST00000595858 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
DDX49-204ENST00000595858 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
DDX49-204ENST00000595858 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
DDX49-204ENST00000595858 USH2AO75445 5202 aa6.75□□□□□ -1.33
DDX49-204ENST00000595858 CRIPTQ9P021 101 aa6.75□□□□□ -1.33
DDX49-204ENST00000595858 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
DDX49-204ENST00000595858 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
DDX49-204ENST00000595858 P0C880 135 aa6.73□□□□□ -1.33
DDX49-204ENST00000595858 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
DDX49-204ENST00000595858 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
DDX49-204ENST00000595858 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
DDX49-204ENST00000595858 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
DDX49-204ENST00000595858 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
DDX49-204ENST00000595858 ROMO1P60602 79 aa6.62□□□□□ -1.35
DDX49-204ENST00000595858 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
DDX49-204ENST00000595858 R4GN34 69 aa6.62□□□□□ -1.35
DDX49-204ENST00000595858 MT1BP07438 61 aa6.59□□□□□ -1.35
DDX49-204ENST00000595858 M0QZ58 72 aa6.58□□□□□ -1.36
DDX49-204ENST00000595858 A0A0D9SG42 100 aa6.56□□□□□ -1.36
DDX49-204ENST00000595858 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
DDX49-204ENST00000595858 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
DDX49-204ENST00000595858 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
DDX49-204ENST00000595858 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
DDX49-204ENST00000595858 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
DDX49-204ENST00000595858 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
DDX49-204ENST00000595858 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
DDX49-204ENST00000595858 MT1XP80297 61 aa6.26□□□□□ -1.41
DDX49-204ENST00000595858 H3BS24 57 aa6.26□□□□□ -1.41
DDX49-204ENST00000595858 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
DDX49-204ENST00000595858 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
DDX49-204ENST00000595858 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
DDX49-204ENST00000595858 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
DDX49-204ENST00000595858 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
DDX49-204ENST00000595858 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
DDX49-204ENST00000595858 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
DDX49-204ENST00000595858 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
DDX49-204ENST00000595858 A0A0A0MQY5 61 aa6□□□□□ -1.45
DDX49-204ENST00000595858 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
DDX49-204ENST00000595858 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
DDX49-204ENST00000595858 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
DDX49-204ENST00000595858 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
DDX49-204ENST00000595858 KMT2DO14686 5537 aa5.93□□□□□ -1.46
DDX49-204ENST00000595858 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
DDX49-204ENST00000595858 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
DDX49-204ENST00000595858 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
DDX49-204ENST00000595858 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
DDX49-204ENST00000595858 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
DDX49-204ENST00000595858 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
DDX49-204ENST00000595858 TNP1P09430 55 aa5.78□□□□□ -1.48
DDX49-204ENST00000595858 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
DDX49-204ENST00000595858 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
DDX49-204ENST00000595858 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
DDX49-204ENST00000595858 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms