RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
RANBP3-229ENST00000592771 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
RANBP3-229ENST00000592771 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
RANBP3-229ENST00000592771 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
RANBP3-229ENST00000592771 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
RANBP3-229ENST00000592771 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
RANBP3-229ENST00000592771 MYCBP2O75592 4640 aa7.63□□□□□ -1.19
RANBP3-229ENST00000592771 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
RANBP3-229ENST00000592771 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
RANBP3-229ENST00000592771 PCLOQ9Y6V0 5065 aa7.51□□□□□ -1.21
RANBP3-229ENST00000592771 J3QL48 77 aa7.51□□□□□ -1.21
RANBP3-229ENST00000592771 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
RANBP3-229ENST00000592771 A0A1B0GU33 70 aa7.5□□□□□ -1.21
RANBP3-229ENST00000592771 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
RANBP3-229ENST00000592771 RPL37P61927 97 aaKnown RBP7.5□□□□□ -1.21
RANBP3-229ENST00000592771 XP32Q5T750 250 aa7.49□□□□□ -1.21
RANBP3-229ENST00000592771 H0YAA0 97 aa7.48□□□□□ -1.21
RANBP3-229ENST00000592771 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
RANBP3-229ENST00000592771 LINC01554Q52M75 96 aa7.44□□□□□ -1.22
RANBP3-229ENST00000592771 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
RANBP3-229ENST00000592771 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
RANBP3-229ENST00000592771 K7ERS5 55 aa7.35□□□□□ -1.23
RANBP3-229ENST00000592771 HERC1Q15751 4861 aa7.27□□□□□ -1.25
RANBP3-229ENST00000592771 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
RANBP3-229ENST00000592771 LRP2P98164 4655 aa7.25□□□□□ -1.25
RANBP3-229ENST00000592771 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
RANBP3-229ENST00000592771 S4R3F8 94 aa7.21□□□□□ -1.25
RANBP3-229ENST00000592771 LPAP08519 4548 aa7.2□□□□□ -1.26
RANBP3-229ENST00000592771 ROMO1P60602 79 aa7.14□□□□□ -1.27
RANBP3-229ENST00000592771 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
RANBP3-229ENST00000592771 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
RANBP3-229ENST00000592771 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
RANBP3-229ENST00000592771 MUC17Q685J3 4493 aa7.02□□□□□ -1.29
RANBP3-229ENST00000592771 A0A0D9SG42 100 aa7.01□□□□□ -1.29
RANBP3-229ENST00000592771 P0C880 135 aa7.01□□□□□ -1.29
RANBP3-229ENST00000592771 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
RANBP3-229ENST00000592771 M0QZ58 72 aa6.96□□□□□ -1.3
RANBP3-229ENST00000592771 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
RANBP3-229ENST00000592771 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
RANBP3-229ENST00000592771 KRTAP19-2Q3LHN2 52 aa6.88□□□□□ -1.31
RANBP3-229ENST00000592771 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
RANBP3-229ENST00000592771 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
RANBP3-229ENST00000592771 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
RANBP3-229ENST00000592771 MUC2Q02817 5179 aa6.79□□□□□ -1.32
RANBP3-229ENST00000592771 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
RANBP3-229ENST00000592771 H3BS24 57 aa6.74□□□□□ -1.33
RANBP3-229ENST00000592771 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
RANBP3-229ENST00000592771 FLGP20930 4061 aaPredicted RBP6.71□□□□□ -1.33
RANBP3-229ENST00000592771 R4GN34 69 aa6.68□□□□□ -1.34
RANBP3-229ENST00000592771 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
RANBP3-229ENST00000592771 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
RANBP3-229ENST00000592771 LCE2BO14633 110 aa6.56□□□□□ -1.36
RANBP3-229ENST00000592771 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
RANBP3-229ENST00000592771 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
RANBP3-229ENST00000592771 MT1HP80294 61 aa6.41□□□□□ -1.38
RANBP3-229ENST00000592771 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
RANBP3-229ENST00000592771 NDUFAF8A1L188 74 aa6.38□□□□□ -1.39
RANBP3-229ENST00000592771 M0R2T5 61 aa6.37□□□□□ -1.39
RANBP3-229ENST00000592771 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
RANBP3-229ENST00000592771 PLAC4Q8WY50 150 aa6.32□□□□□ -1.4
RANBP3-229ENST00000592771 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
RANBP3-229ENST00000592771 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
RANBP3-229ENST00000592771 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
RANBP3-229ENST00000592771 MT2AP02795 61 aa6.23□□□□□ -1.41
RANBP3-229ENST00000592771 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
RANBP3-229ENST00000592771 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.41
RANBP3-229ENST00000592771 MT1FP04733 61 aa6.2□□□□□ -1.42
RANBP3-229ENST00000592771 TNP1P09430 55 aa6.17□□□□□ -1.42
RANBP3-229ENST00000592771 KRTAP10-10P60014 251 aa6.15□□□□□ -1.43
RANBP3-229ENST00000592771 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
RANBP3-229ENST00000592771 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
RANBP3-229ENST00000592771 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
RANBP3-229ENST00000592771 MT1BP07438 61 aa5.95□□□□□ -1.46
RANBP3-229ENST00000592771 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
RANBP3-229ENST00000592771 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
RANBP3-229ENST00000592771 A0A0A0MQY5 61 aa5.82□□□□□ -1.48
RANBP3-229ENST00000592771 MT1XP80297 61 aa5.81□□□□□ -1.48
RANBP3-229ENST00000592771 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
RANBP3-229ENST00000592771 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
RANBP3-229ENST00000592771 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
RANBP3-229ENST00000592771 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
RANBP3-229ENST00000592771 USH2AO75445 5202 aa5.68□□□□□ -1.5
RANBP3-229ENST00000592771 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.51
RANBP3-229ENST00000592771 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
RANBP3-229ENST00000592771 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
RANBP3-229ENST00000592771 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
RANBP3-229ENST00000592771 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
RANBP3-229ENST00000592771 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
RANBP3-229ENST00000592771 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
RANBP3-229ENST00000592771 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
RANBP3-229ENST00000592771 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
RANBP3-229ENST00000592771 INE1O15225 51 aa5.33□□□□□ -1.56
RANBP3-229ENST00000592771 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
RANBP3-229ENST00000592771 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
RANBP3-229ENST00000592771 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
RANBP3-229ENST00000592771 KMT2DO14686 5537 aa5.25□□□□□ -1.57
RANBP3-229ENST00000592771 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
RANBP3-229ENST00000592771 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
RANBP3-229ENST00000592771 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
RANBP3-229ENST00000592771 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms