RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 HERC2O95714 4834 aa10.19□□□□□ -0.78
MBD3-209ENST00000592012 SPATA8Q6RVD6 105 aa10.18□□□□□ -0.78
MBD3-209ENST00000592012 SEC61GP60059 68 aa10.18□□□□□ -0.78
MBD3-209ENST00000592012 LRP2P98164 4655 aa10.16□□□□□ -0.78
MBD3-209ENST00000592012 ABCA13Q86UQ4 5058 aa10.14□□□□□ -0.79
MBD3-209ENST00000592012 MIR22HGQ0VDD5 57 aa10.14□□□□□ -0.79
MBD3-209ENST00000592012 LPAP08519 4548 aa10.13□□□□□ -0.79
MBD3-209ENST00000592012 TPRXLQ17RH7 258 aa10.12□□□□□ -0.79
MBD3-209ENST00000592012 A6NN06 94 aa10.12□□□□□ -0.79
MBD3-209ENST00000592012 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.8
MBD3-209ENST00000592012 A0A1B0GU33 70 aa9.96□□□□□ -0.82
MBD3-209ENST00000592012 KTN1-AS1Q86SY8 53 aa9.95□□□□□ -0.82
MBD3-209ENST00000592012 H0YAA0 97 aa9.94□□□□□ -0.82
MBD3-209ENST00000592012 S4R3F8 94 aa9.94□□□□□ -0.82
MBD3-209ENST00000592012 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
MBD3-209ENST00000592012 PCLOQ9Y6V0 5065 aa9.91□□□□□ -0.82
MBD3-209ENST00000592012 J3QL48 77 aa9.83□□□□□ -0.84
MBD3-209ENST00000592012 KRTAP10-6P60371 365 aaPredicted RBP9.83□□□□□ -0.84
MBD3-209ENST00000592012 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
MBD3-209ENST00000592012 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
MBD3-209ENST00000592012 MUC17Q685J3 4493 aa9.74□□□□□ -0.85
MBD3-209ENST00000592012 SEC61BP60468 96 aaKnown RBP9.74□□□□□ -0.85
MBD3-209ENST00000592012 P0C880 135 aa9.66□□□□□ -0.86
MBD3-209ENST00000592012 CSAG1Q6PB30 78 aa9.66□□□□□ -0.86
MBD3-209ENST00000592012 KRTAP13-4Q3LI77 160 aa9.65□□□□□ -0.86
MBD3-209ENST00000592012 ADM2Q7Z4H4 148 aa9.64□□□□□ -0.87
MBD3-209ENST00000592012 KRTAP4-1Q9BYQ7 146 aa9.62□□□□□ -0.87
MBD3-209ENST00000592012 HERC1Q15751 4861 aa9.61□□□□□ -0.87
MBD3-209ENST00000592012 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
MBD3-209ENST00000592012 K7ERS5 55 aa9.52□□□□□ -0.89
MBD3-209ENST00000592012 A0A0D9SG42 100 aa9.5□□□□□ -0.89
MBD3-209ENST00000592012 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
MBD3-209ENST00000592012 MUC2Q02817 5179 aa9.44□□□□□ -0.9
MBD3-209ENST00000592012 HMCN2Q8NDA2 5059 aa9.39□□□□□ -0.91
MBD3-209ENST00000592012 M0QZ58 72 aa9.38□□□□□ -0.91
MBD3-209ENST00000592012 FLGP20930 4061 aaPredicted RBP9.31□□□□□ -0.92
MBD3-209ENST00000592012 KRTAP12-2P59991 146 aa9.3□□□□□ -0.92
MBD3-209ENST00000592012 KRTAP12-1P59990 96 aa9.27□□□□□ -0.93
MBD3-209ENST00000592012 ROMO1P60602 79 aa9.27□□□□□ -0.93
MBD3-209ENST00000592012 SPINT4Q6UDR6 99 aa9.22□□□□□ -0.93
MBD3-209ENST00000592012 R4GN34 69 aa9.21□□□□□ -0.94
MBD3-209ENST00000592012 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
MBD3-209ENST00000592012 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
MBD3-209ENST00000592012 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
MBD3-209ENST00000592012 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
MBD3-209ENST00000592012 UBR4Q5T4S7 5183 aa9.09□□□□□ -0.95
MBD3-209ENST00000592012 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
MBD3-209ENST00000592012 LCE2CQ5TA81 110 aa9□□□□□ -0.97
MBD3-209ENST00000592012 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
MBD3-209ENST00000592012 C10orf95Q9H7T3 257 aa8.89□□□□□ -0.99
MBD3-209ENST00000592012 H3BS24 57 aa8.77□□□□□ -1.01
MBD3-209ENST00000592012 MT1HP80294 61 aa8.76□□□□□ -1.01
MBD3-209ENST00000592012 M0R2T5 61 aa8.71□□□□□ -1.01
MBD3-209ENST00000592012 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
MBD3-209ENST00000592012 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
MBD3-209ENST00000592012 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
MBD3-209ENST00000592012 MT2AP02795 61 aa8.54□□□□□ -1.04
MBD3-209ENST00000592012 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
MBD3-209ENST00000592012 MT1FP04733 61 aa8.52□□□□□ -1.05
MBD3-209ENST00000592012 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
MBD3-209ENST00000592012 PLAC4Q8WY50 150 aa8.42□□□□□ -1.06
MBD3-209ENST00000592012 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
MBD3-209ENST00000592012 TNP1P09430 55 aa8.33□□□□□ -1.08
MBD3-209ENST00000592012 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
MBD3-209ENST00000592012 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
MBD3-209ENST00000592012 LCE2AQ5TA79 106 aaPredicted RBP8.24□□□□□ -1.09
MBD3-209ENST00000592012 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
MBD3-209ENST00000592012 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
MBD3-209ENST00000592012 MT1BP07438 61 aa8.18□□□□□ -1.1
MBD3-209ENST00000592012 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
MBD3-209ENST00000592012 MT1XP80297 61 aa8.04□□□□□ -1.12
MBD3-209ENST00000592012 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
MBD3-209ENST00000592012 NDUFAF8A1L188 74 aa7.9□□□□□ -1.14
MBD3-209ENST00000592012 LCE2BO14633 110 aa7.9□□□□□ -1.14
MBD3-209ENST00000592012 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
MBD3-209ENST00000592012 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
MBD3-209ENST00000592012 USH2AO75445 5202 aa7.78□□□□□ -1.16
MBD3-209ENST00000592012 KRTAP8-1Q8IUC2 63 aa7.77□□□□□ -1.17
MBD3-209ENST00000592012 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
MBD3-209ENST00000592012 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
MBD3-209ENST00000592012 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
MBD3-209ENST00000592012 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
MBD3-209ENST00000592012 KRTAP12-3P60328 96 aa7.59□□□□□ -1.2
MBD3-209ENST00000592012 LCE2DQ5TA82 110 aaPredicted RBP7.51□□□□□ -1.21
MBD3-209ENST00000592012 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
MBD3-209ENST00000592012 KMT2DO14686 5537 aa7.48□□□□□ -1.21
MBD3-209ENST00000592012 KRTAP9-2Q9BYQ4 174 aa7.41□□□□□ -1.22
MBD3-209ENST00000592012 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
MBD3-209ENST00000592012 SSPOA2VEC9 5147 aa7.37□□□□□ -1.23
MBD3-209ENST00000592012 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
MBD3-209ENST00000592012 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
MBD3-209ENST00000592012 KRTAP19-6Q3LI70 58 aa7.23□□□□□ -1.25
MBD3-209ENST00000592012 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
MBD3-209ENST00000592012 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
MBD3-209ENST00000592012 CRCT1Q9UGL9 99 aa7.1□□□□□ -1.27
MBD3-209ENST00000592012 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
MBD3-209ENST00000592012 MT1EP04732 61 aa6.98□□□□□ -1.29
MBD3-209ENST00000592012 MT1LQ93083 61 aa6.93□□□□□ -1.3
MBD3-209ENST00000592012 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
MBD3-209ENST00000592012 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms