RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	OCR1	Q9BZK8	76 aa		6.72	□□□□□ -1.33
NPC1-212	ENST00000591107	TP53AIP1	Q9HCN2	124 aa		6.72	□□□□□ -1.33
NPC1-212	ENST00000591107	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.72	□□□□□ -1.33
NPC1-212	ENST00000591107	ZCCHC13	Q8WW36	166 aa	Known RBP	6.7	□□□□□ -1.34
NPC1-212	ENST00000591107	UQCRQ	O14949	82 aa		6.69	□□□□□ -1.34
NPC1-212	ENST00000591107	MT2A	P02795	61 aa		6.69	□□□□□ -1.34
NPC1-212	ENST00000591107	SMIM20	Q8N5G0	67 aa		6.69	□□□□□ -1.34
NPC1-212	ENST00000591107		Q5W150	140 aa		6.68	□□□□□ -1.34
NPC1-212	ENST00000591107	TRAV7	A0A075B6U4	112 aa		6.67	□□□□□ -1.34
NPC1-212	ENST00000591107	MT1F	P04733	61 aa		6.66	□□□□□ -1.34
NPC1-212	ENST00000591107	TRAV22	A0A0B4J277	110 aa		6.65	□□□□□ -1.34
NPC1-212	ENST00000591107		H0Y9P7	68 aa		6.64	□□□□□ -1.35
NPC1-212	ENST00000591107	FAM236D	A0A1B0GTK5	79 aa		6.63	□□□□□ -1.35
NPC1-212	ENST00000591107	FAM236C	P0DP71	79 aa		6.63	□□□□□ -1.35
NPC1-212	ENST00000591107	SERP2	Q8N6R1	65 aa		6.63	□□□□□ -1.35
NPC1-212	ENST00000591107	ANAPC13	Q9BS18	74 aa		6.63	□□□□□ -1.35
NPC1-212	ENST00000591107	C5orf47	Q569G3	176 aa		6.61	□□□□□ -1.35
NPC1-212	ENST00000591107	MP68	P56378	58 aa		6.6	□□□□□ -1.35
NPC1-212	ENST00000591107	HRES1	P13985	223 aa		6.58	□□□□□ -1.36
NPC1-212	ENST00000591107	COX7C	P15954	63 aa		6.58	□□□□□ -1.36
NPC1-212	ENST00000591107	LINC00208	Q96KT6	92 aa		6.58	□□□□□ -1.36
NPC1-212	ENST00000591107	IGKV2D-30	A0A075B6S6	120 aa		6.57	□□□□□ -1.36
NPC1-212	ENST00000591107	C1orf64	Q8NEQ6	169 aa		6.56	□□□□□ -1.36
NPC1-212	ENST00000591107	LOC101927531	A0A1B0GV80	90 aa		6.55	□□□□□ -1.36
NPC1-212	ENST00000591107		H3BPC8	53 aa		6.55	□□□□□ -1.36
NPC1-212	ENST00000591107	KRTAP10-10	P60014	251 aa		6.55	□□□□□ -1.36
NPC1-212	ENST00000591107	SPINK7	P58062	85 aa		6.54	□□□□□ -1.36
NPC1-212	ENST00000591107	C7orf65	Q6ZTY9	151 aa		6.54	□□□□□ -1.36
NPC1-212	ENST00000591107	C20orf197	Q8N268	126 aa		6.54	□□□□□ -1.36
NPC1-212	ENST00000591107	MACF1	Q9UPN3	7388 aa	Known RBP	6.53	□□□□□ -1.36
NPC1-212	ENST00000591107	SNURF	Q9Y675	71 aa		6.52	□□□□□ -1.37
NPC1-212	ENST00000591107	SYNE2	Q8WXH0	6885 aa	Known RBP	6.51	□□□□□ -1.37
NPC1-212	ENST00000591107	CYP4F30P	Q9H0H9	118 aa		6.51	□□□□□ -1.37
NPC1-212	ENST00000591107	RBM12B-AS1	Q9P1G2	102 aa		6.5	□□□□□ -1.37
NPC1-212	ENST00000591107	CCDC179	H3BU77	68 aa		6.49	□□□□□ -1.37
NPC1-212	ENST00000591107	KLKP1	Q107X0	134 aa		6.47	□□□□□ -1.37
NPC1-212	ENST00000591107	CYSTM1	Q9H1C7	97 aa		6.43	□□□□□ -1.38
NPC1-212	ENST00000591107	C4orf26	Q17RF5	130 aa		6.4	□□□□□ -1.38
NPC1-212	ENST00000591107	NDUFC1	O43677	76 aa		6.37	□□□□□ -1.39
NPC1-212	ENST00000591107	KRTAP19-6	Q3LI70	58 aa		6.37	□□□□□ -1.39
NPC1-212	ENST00000591107		H7BZZ5	65 aa		6.36	□□□□□ -1.39
NPC1-212	ENST00000591107	SPANXA2-OT1	Q8N9U9	137 aa		6.31	□□□□□ -1.4
NPC1-212	ENST00000591107	DMAC1	Q96GE9	116 aa		6.27	□□□□□ -1.41
NPC1-212	ENST00000591107	LCE1A	Q5T7P2	110 aa		6.26	□□□□□ -1.41
NPC1-212	ENST00000591107		A8MUN3	132 aa		6.25	□□□□□ -1.41
NPC1-212	ENST00000591107	TMEM258	P61165	79 aa		6.25	□□□□□ -1.41
NPC1-212	ENST00000591107	H1FX-AS1	Q4G0G2	97 aa		6.25	□□□□□ -1.41
NPC1-212	ENST00000591107	ATP5E	P56381	51 aa	Predicted RBP	6.21	□□□□□ -1.42
NPC1-212	ENST00000591107	ACYP2	P14621	99 aa		6.2	□□□□□ -1.42
NPC1-212	ENST00000591107	KRTAP6-3	Q3LI67	103 aa		6.2	□□□□□ -1.42
NPC1-212	ENST00000591107		S4R3F8	94 aa		6.18	□□□□□ -1.42
NPC1-212	ENST00000591107	NEB	P20929	6669 aa		6.17	□□□□□ -1.42
NPC1-212	ENST00000591107	COA5	Q86WW8	74 aa		6.14	□□□□□ -1.43
NPC1-212	ENST00000591107	MUC12	Q9UKN1	5478 aa		6.13	□□□□□ -1.43
NPC1-212	ENST00000591107	LCA10	Q71F78	164 aa		6.13	□□□□□ -1.43
NPC1-212	ENST00000591107	CHKB-CPT1B	H3BT56	60 aa		6.12	□□□□□ -1.43
NPC1-212	ENST00000591107	PRAC1	Q96KF2	57 aa		6.06	□□□□□ -1.44
NPC1-212	ENST00000591107	SERP1	Q9Y6X1	66 aa		6.05	□□□□□ -1.44
NPC1-212	ENST00000591107	CSAG1	Q6PB30	78 aa		6.03	□□□□□ -1.44
NPC1-212	ENST00000591107	SPTSSB	Q8NFR3	76 aa		6.03	□□□□□ -1.44
NPC1-212	ENST00000591107	MT1B	P07438	61 aa		6.02	□□□□□ -1.45
NPC1-212	ENST00000591107		A6NN06	94 aa		6	□□□□□ -1.45
NPC1-212	ENST00000591107		Q5VV11	94 aa		5.94	□□□□□ -1.46
NPC1-212	ENST00000591107	RPS28	P62857	69 aa	Known RBP	5.92	□□□□□ -1.46
NPC1-212	ENST00000591107	MDN1	Q9NU22	5596 aa		5.92	□□□□□ -1.46
NPC1-212	ENST00000591107	KRTAP20-1	Q3LI63	56 aa		5.91	□□□□□ -1.46
NPC1-212	ENST00000591107	KRTAP19-8	Q3LI54	63 aa		5.9	□□□□□ -1.46
NPC1-212	ENST00000591107	KMT2D	O14686	5537 aa		5.9	□□□□□ -1.47
NPC1-212	ENST00000591107	KRTAP10-5	P60370	271 aa		5.89	□□□□□ -1.47
NPC1-212	ENST00000591107	MT3	P25713	68 aa		5.88	□□□□□ -1.47
NPC1-212	ENST00000591107	SPRR2G	Q9BYE4	73 aa		5.88	□□□□□ -1.47
NPC1-212	ENST00000591107		H0YAA0	97 aa		5.87	□□□□□ -1.47
NPC1-212	ENST00000591107	ADM2	Q7Z4H4	148 aa		5.87	□□□□□ -1.47
NPC1-212	ENST00000591107	SMIM26	A0A096LP01	95 aa		5.86	□□□□□ -1.47
NPC1-212	ENST00000591107	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.83	□□□□□ -1.48
NPC1-212	ENST00000591107	LINC01558	Q9Y6Z2	57 aa		5.83	□□□□□ -1.48
NPC1-212	ENST00000591107	KRTAP5-9	P26371	169 aa		5.82	□□□□□ -1.48
NPC1-212	ENST00000591107	SEC61G	P60059	68 aa		5.82	□□□□□ -1.48
NPC1-212	ENST00000591107		A0A1B0GU69	56 aa		5.81	□□□□□ -1.48
NPC1-212	ENST00000591107		P0C880	135 aa		5.8	□□□□□ -1.48
NPC1-212	ENST00000591107		V9GYY9	64 aa		5.79	□□□□□ -1.48
NPC1-212	ENST00000591107		Q1T7F1	81 aa		5.78	□□□□□ -1.48
NPC1-212	ENST00000591107	PRR15L	Q9BU68	103 aa		5.76	□□□□□ -1.49
NPC1-212	ENST00000591107	NDUFAF8	A1L188	74 aa		5.73	□□□□□ -1.49
NPC1-212	ENST00000591107	PSPHP1	O15172	72 aa		5.71	□□□□□ -1.5
NPC1-212	ENST00000591107	KRTAP2-2	Q9BYT5	123 aa		5.71	□□□□□ -1.5
NPC1-212	ENST00000591107	CRIPT	Q9P021	101 aa		5.69	□□□□□ -1.5
NPC1-212	ENST00000591107		A0A1B0GU33	70 aa		5.68	□□□□□ -1.5
NPC1-212	ENST00000591107		M0QZ58	72 aa		5.66	□□□□□ -1.5
NPC1-212	ENST00000591107	SPRR2F	Q96RM1	72 aa		5.66	□□□□□ -1.5
NPC1-212	ENST00000591107		R4GN34	69 aa		5.66	□□□□□ -1.5
NPC1-212	ENST00000591107	SPRR2E	P22531	72 aa		5.64	□□□□□ -1.51
NPC1-212	ENST00000591107	SPRR2B	P35325	72 aa		5.64	□□□□□ -1.51
NPC1-212	ENST00000591107	SPRR2A	P35326	72 aa		5.64	□□□□□ -1.51
NPC1-212	ENST00000591107	KRTAP2-3	P0C7H8	128 aa		5.63	□□□□□ -1.51
NPC1-212	ENST00000591107	KRTAP13-4	Q3LI77	160 aa		5.63	□□□□□ -1.51
NPC1-212	ENST00000591107	KRTAP2-4	Q9BYR9	128 aa		5.63	□□□□□ -1.51
NPC1-212	ENST00000591107	SPATA8	Q6RVD6	105 aa		5.61	□□□□□ -1.51
NPC1-212	ENST00000591107	MT1X	P80297	61 aa		5.59	□□□□□ -1.51
NPC1-212	ENST00000591107	UQCR11	O14957	56 aa		5.58	□□□□□ -1.52

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