RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097		H3BPC8	53 aa		10.86	□□□□□ -0.67
CIRBP-231	ENST00000591097	FAM236A	A0A1B0GUQ0	79 aa		10.8	□□□□□ -0.68
CIRBP-231	ENST00000591097	FAM236B	A0A1B0GV22	79 aa		10.8	□□□□□ -0.68
CIRBP-231	ENST00000591097		A8MUN3	132 aa		10.79	□□□□□ -0.68
CIRBP-231	ENST00000591097	TRAV7	A0A075B6U4	112 aa		10.73	□□□□□ -0.69
CIRBP-231	ENST00000591097	SMIM20	Q8N5G0	67 aa		10.73	□□□□□ -0.69
CIRBP-231	ENST00000591097	NDUFC1	O43677	76 aa		10.66	□□□□□ -0.7
CIRBP-231	ENST00000591097	KRTAP19-1	Q8IUB9	90 aa		10.64	□□□□□ -0.71
CIRBP-231	ENST00000591097	DMAC1	Q96GE9	116 aa		10.63	□□□□□ -0.71
CIRBP-231	ENST00000591097	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	10.59	□□□□□ -0.71
CIRBP-231	ENST00000591097		H0YAA0	97 aa		10.54	□□□□□ -0.72
CIRBP-231	ENST00000591097	SPRR2G	Q9BYE4	73 aa		10.54	□□□□□ -0.72
CIRBP-231	ENST00000591097	KRTAP19-6	Q3LI70	58 aa		10.5	□□□□□ -0.73
CIRBP-231	ENST00000591097	SERP2	Q8N6R1	65 aa		10.48	□□□□□ -0.73
CIRBP-231	ENST00000591097	SNURF	Q9Y675	71 aa		10.47	□□□□□ -0.73
CIRBP-231	ENST00000591097	CRIPT	Q9P021	101 aa		10.43	□□□□□ -0.74
CIRBP-231	ENST00000591097	KRTAP19-8	Q3LI54	63 aa		10.42	□□□□□ -0.74
CIRBP-231	ENST00000591097	C20orf197	Q8N268	126 aa		10.4	□□□□□ -0.74
CIRBP-231	ENST00000591097	MT1B	P07438	61 aa		10.39	□□□□□ -0.75
CIRBP-231	ENST00000591097	ADM2	Q7Z4H4	148 aa		10.39	□□□□□ -0.75
CIRBP-231	ENST00000591097	ACYP2	P14621	99 aa		10.37	□□□□□ -0.75
CIRBP-231	ENST00000591097		Q5VV11	94 aa		10.33	□□□□□ -0.76
CIRBP-231	ENST00000591097	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.33	□□□□□ -0.76
CIRBP-231	ENST00000591097	SPANXA2-OT1	Q8N9U9	137 aa		10.31	□□□□□ -0.76
CIRBP-231	ENST00000591097	PCP4	P48539	62 aa		10.25	□□□□□ -0.77
CIRBP-231	ENST00000591097		P0C880	135 aa		10.23	□□□□□ -0.77
CIRBP-231	ENST00000591097	COX7C	P15954	63 aa		10.23	□□□□□ -0.77
CIRBP-231	ENST00000591097	KRTAP3-2	Q9BYR7	98 aa		10.23	□□□□□ -0.77
CIRBP-231	ENST00000591097	MACF1	Q9UPN3	7388 aa	Known RBP	10.2	□□□□□ -0.78
CIRBP-231	ENST00000591097	ANAPC13	Q9BS18	74 aa		10.18	□□□□□ -0.78
CIRBP-231	ENST00000591097	CHKB-CPT1B	H3BT56	60 aa		10.16	□□□□□ -0.78
CIRBP-231	ENST00000591097	SPTSSB	Q8NFR3	76 aa		10.15	□□□□□ -0.78
CIRBP-231	ENST00000591097	CYSTM1	Q9H1C7	97 aa		10.09	□□□□□ -0.79
CIRBP-231	ENST00000591097		R4GN34	69 aa		10.09	□□□□□ -0.79
CIRBP-231	ENST00000591097		A6NN06	94 aa		10.08	□□□□□ -0.8
CIRBP-231	ENST00000591097	KRTAP9-7	A8MTY7	169 aa		10.08	□□□□□ -0.8
CIRBP-231	ENST00000591097	KRTAP10-5	P60370	271 aa		10.07	□□□□□ -0.8
CIRBP-231	ENST00000591097	SYNE2	Q8WXH0	6885 aa	Known RBP	10.05	□□□□□ -0.8
CIRBP-231	ENST00000591097		H7BZZ5	65 aa		10.05	□□□□□ -0.8
CIRBP-231	ENST00000591097		M0QZ58	72 aa		10.03	□□□□□ -0.8
CIRBP-231	ENST00000591097	COA5	Q86WW8	74 aa		9.98	□□□□□ -0.81
CIRBP-231	ENST00000591097	CCDC179	H3BU77	68 aa		9.97	□□□□□ -0.81
CIRBP-231	ENST00000591097	PLAC4	Q8WY50	150 aa		9.87	□□□□□ -0.83
CIRBP-231	ENST00000591097	LINC01554	Q52M75	96 aa		9.85	□□□□□ -0.83
CIRBP-231	ENST00000591097	MT1X	P80297	61 aa		9.82	□□□□□ -0.84
CIRBP-231	ENST00000591097	PRO2289	Q9P1D8	64 aa		9.76	□□□□□ -0.85
CIRBP-231	ENST00000591097	KRTAP6-3	Q3LI67	103 aa		9.75	□□□□□ -0.85
CIRBP-231	ENST00000591097	KRTAP13-4	Q3LI77	160 aa		9.72	□□□□□ -0.85
CIRBP-231	ENST00000591097	SEC61G	P60059	68 aa		9.62	□□□□□ -0.87
CIRBP-231	ENST00000591097	TMEM258	P61165	79 aa		9.61	□□□□□ -0.87
CIRBP-231	ENST00000591097	SERP1	Q9Y6X1	66 aa		9.61	□□□□□ -0.87
CIRBP-231	ENST00000591097	ATP5E	P56381	51 aa	Predicted RBP	9.6	□□□□□ -0.87
CIRBP-231	ENST00000591097	KMT2D	O14686	5537 aa		9.57	□□□□□ -0.88
CIRBP-231	ENST00000591097	KRTAP12-2	P59991	146 aa		9.51	□□□□□ -0.89
CIRBP-231	ENST00000591097	MUC12	Q9UKN1	5478 aa		9.5	□□□□□ -0.89
CIRBP-231	ENST00000591097		A0A1B0GU33	70 aa		9.48	□□□□□ -0.89
CIRBP-231	ENST00000591097	KRTAP5-9	P26371	169 aa		9.48	□□□□□ -0.89
CIRBP-231	ENST00000591097	SPATA8	Q6RVD6	105 aa		9.45	□□□□□ -0.9
CIRBP-231	ENST00000591097		A0A1B0GU69	56 aa		9.44	□□□□□ -0.9
CIRBP-231	ENST00000591097	NEB	P20929	6669 aa		9.39	□□□□□ -0.91
CIRBP-231	ENST00000591097		A0A0D9SG42	100 aa		9.37	□□□□□ -0.91
CIRBP-231	ENST00000591097	KRTAP10-7	P60409	375 aa	Predicted RBP	9.36	□□□□□ -0.91
CIRBP-231	ENST00000591097	MDN1	Q9NU22	5596 aa		9.33	□□□□□ -0.92
CIRBP-231	ENST00000591097	KRTAP10-12	P60413	245 aa		9.33	□□□□□ -0.92
CIRBP-231	ENST00000591097	RPS28	P62857	69 aa	Known RBP	9.31	□□□□□ -0.92
CIRBP-231	ENST00000591097	CAMK2N1	Q7Z7J9	78 aa		9.31	□□□□□ -0.92
CIRBP-231	ENST00000591097	KRTAP4-8	A0A0G2JLE6	195 aa		9.29	□□□□□ -0.92
CIRBP-231	ENST00000591097	KRTAP4-8	Q9BYQ9	185 aa		9.29	□□□□□ -0.92
CIRBP-231	ENST00000591097	KRTAP8-1	Q8IUC2	63 aa		9.27	□□□□□ -0.93
CIRBP-231	ENST00000591097	KRTAP12-1	P59990	96 aa		9.26	□□□□□ -0.93
CIRBP-231	ENST00000591097	LINC01558	Q9Y6Z2	57 aa		9.26	□□□□□ -0.93
CIRBP-231	ENST00000591097	SPRR2F	Q96RM1	72 aa		9.21	□□□□□ -0.93
CIRBP-231	ENST00000591097	PRR15L	Q9BU68	103 aa		9.21	□□□□□ -0.93
CIRBP-231	ENST00000591097	SMIM26	A0A096LP01	95 aa		9.2	□□□□□ -0.94
CIRBP-231	ENST00000591097	SPINT4	Q6UDR6	99 aa		9.2	□□□□□ -0.94
CIRBP-231	ENST00000591097		A8MU10	97 aa		9.16	□□□□□ -0.94
CIRBP-231	ENST00000591097	SPRR2E	P22531	72 aa		8.99	□□□□□ -0.97
CIRBP-231	ENST00000591097	SPRR2B	P35325	72 aa		8.99	□□□□□ -0.97
CIRBP-231	ENST00000591097	SPRR2A	P35326	72 aa		8.99	□□□□□ -0.97
CIRBP-231	ENST00000591097	LCE1A	Q5T7P2	110 aa		8.97	□□□□□ -0.97
CIRBP-231	ENST00000591097	UQCR11	O14957	56 aa		8.95	□□□□□ -0.98
CIRBP-231	ENST00000591097		Q1T7F1	81 aa		8.9	□□□□□ -0.99
CIRBP-231	ENST00000591097		V9GYY9	64 aa		8.86	□□□□□ -0.99
CIRBP-231	ENST00000591097	KRTAP20-1	Q3LI63	56 aa		8.85	□□□□□ -0.99
CIRBP-231	ENST00000591097	C10orf95	Q9H7T3	257 aa		8.81	□□□□□ -1
CIRBP-231	ENST00000591097	PSPHP1	O15172	72 aa		8.8	□□□□□ -1
CIRBP-231	ENST00000591097	KRTAP19-7	Q3SYF9	63 aa		8.79	□□□□□ -1
CIRBP-231	ENST00000591097	MIR22HG	Q0VDD5	57 aa		8.78	□□□□□ -1
CIRBP-231	ENST00000591097	KRTAP2-3	P0C7H8	128 aa		8.7	□□□□□ -1.02
CIRBP-231	ENST00000591097	KRTAP2-4	Q9BYR9	128 aa		8.7	□□□□□ -1.02
CIRBP-231	ENST00000591097	SVIP	Q8NHG7	77 aa		8.7	□□□□□ -1.02
CIRBP-231	ENST00000591097	TNP1	P09430	55 aa		8.69	□□□□□ -1.02
CIRBP-231	ENST00000591097	MT1E	P04732	61 aa		8.68	□□□□□ -1.02
CIRBP-231	ENST00000591097	SPRR2D	P22532	72 aa		8.68	□□□□□ -1.02
CIRBP-231	ENST00000591097	KRTAP19-5	Q3LI72	72 aa		8.6	□□□□□ -1.03
CIRBP-231	ENST00000591097	LCE3A	Q5TA76	89 aa		8.57	□□□□□ -1.04
CIRBP-231	ENST00000591097	LCE5A	Q5TCM9	118 aa		8.53	□□□□□ -1.04
CIRBP-231	ENST00000591097	KRTAP19-3	Q7Z4W3	81 aa		8.52	□□□□□ -1.05
CIRBP-231	ENST00000591097		A6NED7	52 aa		8.49	□□□□□ -1.05
CIRBP-231	ENST00000591097		K7ERS5	55 aa		8.49	□□□□□ -1.05

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