RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 SMIM26A0A096LP01 95 aa9.09□□□□□ -0.95
CTDP1-205ENST00000590599 H1FX-AS1Q4G0G2 97 aa9.08□□□□□ -0.96
CTDP1-205ENST00000590599 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
CTDP1-205ENST00000590599 S4R3F8 94 aa9.01□□□□□ -0.97
CTDP1-205ENST00000590599 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
CTDP1-205ENST00000590599 LCA10Q71F78 164 aa8.97□□□□□ -0.97
CTDP1-205ENST00000590599 KRTAP19-2Q3LHN2 52 aa8.94□□□□□ -0.98
CTDP1-205ENST00000590599 V9GYY9 64 aa8.91□□□□□ -0.98
CTDP1-205ENST00000590599 Q1T7F1 81 aa8.91□□□□□ -0.98
CTDP1-205ENST00000590599 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
CTDP1-205ENST00000590599 LCE2CQ5TA81 110 aa8.89□□□□□ -0.99
CTDP1-205ENST00000590599 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
CTDP1-205ENST00000590599 CSAG1Q6PB30 78 aa8.81□□□□□ -1
CTDP1-205ENST00000590599 PRR15LQ9BU68 103 aa8.8□□□□□ -1
CTDP1-205ENST00000590599 KRTAP9-2Q9BYQ4 174 aa8.8□□□□□ -1
CTDP1-205ENST00000590599 PSPHP1O15172 72 aa8.78□□□□□ -1
CTDP1-205ENST00000590599 A0A1B0GU69 56 aa8.77□□□□□ -1.01
CTDP1-205ENST00000590599 SEC61GP60059 68 aa8.76□□□□□ -1.01
CTDP1-205ENST00000590599 MT1HP80294 61 aa8.74□□□□□ -1.01
CTDP1-205ENST00000590599 FLGP20930 4061 aaPredicted RBP8.72□□□□□ -1.01
CTDP1-205ENST00000590599 Q5VV11 94 aa8.68□□□□□ -1.02
CTDP1-205ENST00000590599 ADM2Q7Z4H4 148 aa8.61□□□□□ -1.03
CTDP1-205ENST00000590599 H0YAA0 97 aa8.59□□□□□ -1.03
CTDP1-205ENST00000590599 M0R2T5 61 aa8.59□□□□□ -1.03
CTDP1-205ENST00000590599 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
CTDP1-205ENST00000590599 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
CTDP1-205ENST00000590599 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
CTDP1-205ENST00000590599 A6NED7 52 aa8.53□□□□□ -1.04
CTDP1-205ENST00000590599 P0C880 135 aa8.52□□□□□ -1.05
CTDP1-205ENST00000590599 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
CTDP1-205ENST00000590599 A0A1B0GU33 70 aa8.51□□□□□ -1.05
CTDP1-205ENST00000590599 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
CTDP1-205ENST00000590599 FSIP2Q5CZC0 6907 aa8.5□□□□□ -1.05
CTDP1-205ENST00000590599 UQCR11O14957 56 aa8.48□□□□□ -1.05
CTDP1-205ENST00000590599 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
CTDP1-205ENST00000590599 KRTAP9-6A0A140TA67 174 aa8.45□□□□□ -1.06
CTDP1-205ENST00000590599 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
CTDP1-205ENST00000590599 SPATA8Q6RVD6 105 aa8.36□□□□□ -1.07
CTDP1-205ENST00000590599 CDC42SE1Q9NRR8 79 aa8.35□□□□□ -1.07
CTDP1-205ENST00000590599 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
CTDP1-205ENST00000590599 M0QZ58 72 aa8.32□□□□□ -1.08
CTDP1-205ENST00000590599 R4GN34 69 aa8.31□□□□□ -1.08
CTDP1-205ENST00000590599 KRTAP9-8Q9BYQ0 159 aa8.3□□□□□ -1.08
CTDP1-205ENST00000590599 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
CTDP1-205ENST00000590599 A8MU10 97 aa8.27□□□□□ -1.08
CTDP1-205ENST00000590599 MT2AP02795 61 aa8.27□□□□□ -1.09
CTDP1-205ENST00000590599 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
CTDP1-205ENST00000590599 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
CTDP1-205ENST00000590599 MT1FP04733 61 aa8.22□□□□□ -1.09
CTDP1-205ENST00000590599 A0A0D9SG42 100 aa8.21□□□□□ -1.1
CTDP1-205ENST00000590599 LINC01554Q52M75 96 aa8.17□□□□□ -1.1
CTDP1-205ENST00000590599 USH2AO75445 5202 aa8.12□□□□□ -1.11
CTDP1-205ENST00000590599 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
CTDP1-205ENST00000590599 K7ERS5 55 aa8.05□□□□□ -1.12
CTDP1-205ENST00000590599 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
CTDP1-205ENST00000590599 SSPOA2VEC9 5147 aa8.04□□□□□ -1.12
CTDP1-205ENST00000590599 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
CTDP1-205ENST00000590599 LCE2BO14633 110 aa8.02□□□□□ -1.13
CTDP1-205ENST00000590599 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
CTDP1-205ENST00000590599 KRTAP9-3Q9BYQ3 159 aa8.02□□□□□ -1.13
CTDP1-205ENST00000590599 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
CTDP1-205ENST00000590599 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
CTDP1-205ENST00000590599 A6NN06 94 aa7.98□□□□□ -1.13
CTDP1-205ENST00000590599 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
CTDP1-205ENST00000590599 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
CTDP1-205ENST00000590599 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.15
CTDP1-205ENST00000590599 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
CTDP1-205ENST00000590599 CAMK2N1Q7Z7J9 78 aa7.8□□□□□ -1.16
CTDP1-205ENST00000590599 MT1BP07438 61 aa7.76□□□□□ -1.17
CTDP1-205ENST00000590599 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
CTDP1-205ENST00000590599 ROMO1P60602 79 aa7.68□□□□□ -1.18
CTDP1-205ENST00000590599 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
CTDP1-205ENST00000590599 KRTAP9-7A8MTY7 169 aa7.61□□□□□ -1.19
CTDP1-205ENST00000590599 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
CTDP1-205ENST00000590599 MACF1Q9UPN3 7388 aaKnown RBP7.56□□□□□ -1.2
CTDP1-205ENST00000590599 PRAC1Q96KF2 57 aa7.51□□□□□ -1.21
CTDP1-205ENST00000590599 MT1XP80297 61 aa7.5□□□□□ -1.21
CTDP1-205ENST00000590599 SYNE2Q8WXH0 6885 aaKnown RBP7.49□□□□□ -1.21
CTDP1-205ENST00000590599 KRTAP10-5P60370 271 aa7.48□□□□□ -1.21
CTDP1-205ENST00000590599 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
CTDP1-205ENST00000590599 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.23
CTDP1-205ENST00000590599 TNP1P09430 55 aa7.39□□□□□ -1.23
CTDP1-205ENST00000590599 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
CTDP1-205ENST00000590599 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
CTDP1-205ENST00000590599 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
CTDP1-205ENST00000590599 KRTAP10-12P60413 245 aa7.13□□□□□ -1.27
CTDP1-205ENST00000590599 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
CTDP1-205ENST00000590599 MUC12Q9UKN1 5478 aa7.08□□□□□ -1.28
CTDP1-205ENST00000590599 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
CTDP1-205ENST00000590599 KMT2DO14686 5537 aa7.06□□□□□ -1.28
CTDP1-205ENST00000590599 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
CTDP1-205ENST00000590599 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
CTDP1-205ENST00000590599 NEBP20929 6669 aa6.92□□□□□ -1.3
CTDP1-205ENST00000590599 KRTAP8-1Q8IUC2 63 aa6.91□□□□□ -1.3
CTDP1-205ENST00000590599 MDN1Q9NU22 5596 aa6.9□□□□□ -1.31
CTDP1-205ENST00000590599 KRTAP5-9P26371 169 aa6.9□□□□□ -1.31
CTDP1-205ENST00000590599 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
CTDP1-205ENST00000590599 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
CTDP1-205ENST00000590599 SPRR2FQ96RM1 72 aa6.76□□□□□ -1.33
CTDP1-205ENST00000590599 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms