RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 V9GYY9 64 aa8.64□□□□□ -1.03
GCDH-212ENST00000590530 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
GCDH-212ENST00000590530 SPTSSBQ8NFR3 76 aa8.53□□□□□ -1.04
GCDH-212ENST00000590530 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
GCDH-212ENST00000590530 KRTAP19-2Q3LHN2 52 aa8.51□□□□□ -1.05
GCDH-212ENST00000590530 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
GCDH-212ENST00000590530 PRR15LQ9BU68 103 aa8.47□□□□□ -1.05
GCDH-212ENST00000590530 PSPHP1O15172 72 aa8.46□□□□□ -1.06
GCDH-212ENST00000590530 FAT4Q6V0I7 4981 aa8.44□□□□□ -1.06
GCDH-212ENST00000590530 S4R3F8 94 aa8.43□□□□□ -1.06
GCDH-212ENST00000590530 Q5VV11 94 aa8.43□□□□□ -1.06
GCDH-212ENST00000590530 LCA10Q71F78 164 aa8.4□□□□□ -1.06
GCDH-212ENST00000590530 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
GCDH-212ENST00000590530 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
GCDH-212ENST00000590530 A0A1B0GU69 56 aa8.37□□□□□ -1.07
GCDH-212ENST00000590530 SEC61GP60059 68 aa8.3□□□□□ -1.08
GCDH-212ENST00000590530 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
GCDH-212ENST00000590530 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
GCDH-212ENST00000590530 A6NED7 52 aa8.22□□□□□ -1.09
GCDH-212ENST00000590530 MT1HP80294 61 aa8.19□□□□□ -1.1
GCDH-212ENST00000590530 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
GCDH-212ENST00000590530 UQCR11O14957 56 aa8.14□□□□□ -1.11
GCDH-212ENST00000590530 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
GCDH-212ENST00000590530 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
GCDH-212ENST00000590530 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
GCDH-212ENST00000590530 H0YAA0 97 aa8.11□□□□□ -1.11
GCDH-212ENST00000590530 A0A1B0GU33 70 aa8.09□□□□□ -1.12
GCDH-212ENST00000590530 PRO0628Q9UI54 55 aa8.08□□□□□ -1.12
GCDH-212ENST00000590530 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
GCDH-212ENST00000590530 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
GCDH-212ENST00000590530 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
GCDH-212ENST00000590530 M0R2T5 61 aa8.04□□□□□ -1.12
GCDH-212ENST00000590530 A8MU10 97 aa8.03□□□□□ -1.12
GCDH-212ENST00000590530 P0C880 135 aa8.02□□□□□ -1.13
GCDH-212ENST00000590530 LCE2AQ5TA79 106 aaPredicted RBP7.98□□□□□ -1.13
GCDH-212ENST00000590530 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
GCDH-212ENST00000590530 KRTAP9-8Q9BYQ0 159 aa7.87□□□□□ -1.15
GCDH-212ENST00000590530 M0QZ58 72 aa7.86□□□□□ -1.15
GCDH-212ENST00000590530 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
GCDH-212ENST00000590530 MT2AP02795 61 aa7.83□□□□□ -1.16
GCDH-212ENST00000590530 MT1FP04733 61 aa7.81□□□□□ -1.16
GCDH-212ENST00000590530 R4GN34 69 aa7.76□□□□□ -1.17
GCDH-212ENST00000590530 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
GCDH-212ENST00000590530 A0A0D9SG42 100 aa7.72□□□□□ -1.17
GCDH-212ENST00000590530 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
GCDH-212ENST00000590530 A6NN06 94 aa7.72□□□□□ -1.17
GCDH-212ENST00000590530 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
GCDH-212ENST00000590530 K7ERS5 55 aa7.68□□□□□ -1.18
GCDH-212ENST00000590530 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
GCDH-212ENST00000590530 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
GCDH-212ENST00000590530 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
GCDH-212ENST00000590530 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
GCDH-212ENST00000590530 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
GCDH-212ENST00000590530 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
GCDH-212ENST00000590530 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
GCDH-212ENST00000590530 KTN1-AS1Q86SY8 53 aa7.47□□□□□ -1.21
GCDH-212ENST00000590530 LCE2BO14633 110 aa7.45□□□□□ -1.22
GCDH-212ENST00000590530 ROMO1P60602 79 aa7.38□□□□□ -1.23
GCDH-212ENST00000590530 USH2AO75445 5202 aa7.36□□□□□ -1.23
GCDH-212ENST00000590530 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
GCDH-212ENST00000590530 MT1BP07438 61 aa7.34□□□□□ -1.23
GCDH-212ENST00000590530 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
GCDH-212ENST00000590530 PLAC4Q8WY50 150 aa7.26□□□□□ -1.25
GCDH-212ENST00000590530 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
GCDH-212ENST00000590530 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
GCDH-212ENST00000590530 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
GCDH-212ENST00000590530 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
GCDH-212ENST00000590530 SSPOA2VEC9 5147 aa7.17□□□□□ -1.26
GCDH-212ENST00000590530 KRTAP9-2Q9BYQ4 174 aa7.12□□□□□ -1.27
GCDH-212ENST00000590530 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.28
GCDH-212ENST00000590530 MT1XP80297 61 aa7.07□□□□□ -1.28
GCDH-212ENST00000590530 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
GCDH-212ENST00000590530 TNP1P09430 55 aa6.96□□□□□ -1.3
GCDH-212ENST00000590530 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
GCDH-212ENST00000590530 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.31
GCDH-212ENST00000590530 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
GCDH-212ENST00000590530 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
GCDH-212ENST00000590530 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
GCDH-212ENST00000590530 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
GCDH-212ENST00000590530 KRTAP10-7P60409 375 aaPredicted RBP6.81□□□□□ -1.32
GCDH-212ENST00000590530 KMT2DO14686 5537 aa6.73□□□□□ -1.33
GCDH-212ENST00000590530 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
GCDH-212ENST00000590530 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
GCDH-212ENST00000590530 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
GCDH-212ENST00000590530 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
GCDH-212ENST00000590530 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
GCDH-212ENST00000590530 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
GCDH-212ENST00000590530 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
GCDH-212ENST00000590530 SYNE2Q8WXH0 6885 aaKnown RBP6.41□□□□□ -1.38
GCDH-212ENST00000590530 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
GCDH-212ENST00000590530 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
GCDH-212ENST00000590530 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
GCDH-212ENST00000590530 H3BS24 57 aa6.33□□□□□ -1.4
GCDH-212ENST00000590530 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
GCDH-212ENST00000590530 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
GCDH-212ENST00000590530 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
GCDH-212ENST00000590530 MT1EP04732 61 aa6.19□□□□□ -1.42
GCDH-212ENST00000590530 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
GCDH-212ENST00000590530 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
GCDH-212ENST00000590530 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms