RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
LSM14A-208ENST00000590416 SNURFQ9Y675 71 aa7.94□□□□□ -1.14
LSM14A-208ENST00000590416 NDUFC1O43677 76 aa7.91□□□□□ -1.14
LSM14A-208ENST00000590416 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
LSM14A-208ENST00000590416 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
LSM14A-208ENST00000590416 KRTAP9-6A0A140TA67 174 aa7.87□□□□□ -1.15
LSM14A-208ENST00000590416 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
LSM14A-208ENST00000590416 COX7CP15954 63 aa7.81□□□□□ -1.16
LSM14A-208ENST00000590416 ACYP2P14621 99 aa7.79□□□□□ -1.16
LSM14A-208ENST00000590416 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
LSM14A-208ENST00000590416 CRCT1Q9UGL9 99 aa7.75□□□□□ -1.17
LSM14A-208ENST00000590416 LCE2BO14633 110 aa7.73□□□□□ -1.17
LSM14A-208ENST00000590416 SPANXA2-OT1Q8N9U9 137 aa7.73□□□□□ -1.17
LSM14A-208ENST00000590416 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
LSM14A-208ENST00000590416 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.18
LSM14A-208ENST00000590416 USH2AO75445 5202 aa7.67□□□□□ -1.18
LSM14A-208ENST00000590416 H0YAA0 97 aa7.67□□□□□ -1.18
LSM14A-208ENST00000590416 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
LSM14A-208ENST00000590416 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
LSM14A-208ENST00000590416 CYSTM1Q9H1C7 97 aa7.6□□□□□ -1.19
LSM14A-208ENST00000590416 H7BZZ5 65 aa7.59□□□□□ -1.19
LSM14A-208ENST00000590416 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
LSM14A-208ENST00000590416 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
LSM14A-208ENST00000590416 CCDC179H3BU77 68 aa7.56□□□□□ -1.2
LSM14A-208ENST00000590416 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
LSM14A-208ENST00000590416 COA5Q86WW8 74 aa7.54□□□□□ -1.2
LSM14A-208ENST00000590416 P0C880 135 aa7.51□□□□□ -1.21
LSM14A-208ENST00000590416 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
LSM14A-208ENST00000590416 Q5VV11 94 aa7.5□□□□□ -1.21
LSM14A-208ENST00000590416 R4GN34 69 aa7.47□□□□□ -1.21
LSM14A-208ENST00000590416 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
LSM14A-208ENST00000590416 M0QZ58 72 aa7.43□□□□□ -1.22
LSM14A-208ENST00000590416 MT1BP07438 61 aa7.41□□□□□ -1.22
LSM14A-208ENST00000590416 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
LSM14A-208ENST00000590416 ATP5EP56381 51 aaPredicted RBP7.37□□□□□ -1.23
LSM14A-208ENST00000590416 SEC61GP60059 68 aa7.33□□□□□ -1.24
LSM14A-208ENST00000590416 LINC01554Q52M75 96 aa7.33□□□□□ -1.24
LSM14A-208ENST00000590416 FCGBPQ9Y6R7 5405 aaPredicted RBP7.33□□□□□ -1.24
LSM14A-208ENST00000590416 SERP1Q9Y6X1 66 aa7.3□□□□□ -1.24
LSM14A-208ENST00000590416 TMEM258P61165 79 aa7.29□□□□□ -1.24
LSM14A-208ENST00000590416 A6NN06 94 aa7.27□□□□□ -1.25
LSM14A-208ENST00000590416 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
LSM14A-208ENST00000590416 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
LSM14A-208ENST00000590416 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
LSM14A-208ENST00000590416 A0A1B0GU69 56 aa7.17□□□□□ -1.26
LSM14A-208ENST00000590416 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
LSM14A-208ENST00000590416 A0A1B0GU33 70 aa7.12□□□□□ -1.27
LSM14A-208ENST00000590416 PRO2289Q9P1D8 64 aa7.11□□□□□ -1.27
LSM14A-208ENST00000590416 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
LSM14A-208ENST00000590416 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
LSM14A-208ENST00000590416 A0A0D9SG42 100 aa7.04□□□□□ -1.28
LSM14A-208ENST00000590416 PCP4P48539 62 aa7.03□□□□□ -1.28
LSM14A-208ENST00000590416 MT1XP80297 61 aa7.03□□□□□ -1.28
LSM14A-208ENST00000590416 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
LSM14A-208ENST00000590416 LINC01558Q9Y6Z2 57 aa7.02□□□□□ -1.29
LSM14A-208ENST00000590416 MACF1Q9UPN3 7388 aaKnown RBP7□□□□□ -1.29
LSM14A-208ENST00000590416 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
LSM14A-208ENST00000590416 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
LSM14A-208ENST00000590416 SPINT4Q6UDR6 99 aa6.93□□□□□ -1.3
LSM14A-208ENST00000590416 SYNE2Q8WXH0 6885 aaKnown RBP6.9□□□□□ -1.31
LSM14A-208ENST00000590416 A8MU10 97 aa6.86□□□□□ -1.31
LSM14A-208ENST00000590416 V9GYY9 64 aa6.85□□□□□ -1.31
LSM14A-208ENST00000590416 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
LSM14A-208ENST00000590416 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
LSM14A-208ENST00000590416 UQCR11O14957 56 aa6.81□□□□□ -1.32
LSM14A-208ENST00000590416 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
LSM14A-208ENST00000590416 PSPHP1O15172 72 aa6.78□□□□□ -1.32
LSM14A-208ENST00000590416 Q1T7F1 81 aa6.77□□□□□ -1.33
LSM14A-208ENST00000590416 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
LSM14A-208ENST00000590416 KMT2DO14686 5537 aa6.7□□□□□ -1.34
LSM14A-208ENST00000590416 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
LSM14A-208ENST00000590416 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
LSM14A-208ENST00000590416 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
LSM14A-208ENST00000590416 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
LSM14A-208ENST00000590416 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
LSM14A-208ENST00000590416 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
LSM14A-208ENST00000590416 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
LSM14A-208ENST00000590416 SPRR2FQ96RM1 72 aa6.6□□□□□ -1.35
LSM14A-208ENST00000590416 A6NED7 52 aa6.58□□□□□ -1.36
LSM14A-208ENST00000590416 K7ERS5 55 aa6.55□□□□□ -1.36
LSM14A-208ENST00000590416 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
LSM14A-208ENST00000590416 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
LSM14A-208ENST00000590416 TNP1P09430 55 aa6.46□□□□□ -1.38
LSM14A-208ENST00000590416 NEBP20929 6669 aa6.43□□□□□ -1.38
LSM14A-208ENST00000590416 SPRR2EP22531 72 aa6.43□□□□□ -1.38
LSM14A-208ENST00000590416 SPRR2BP35325 72 aa6.43□□□□□ -1.38
LSM14A-208ENST00000590416 SPRR2AP35326 72 aa6.43□□□□□ -1.38
LSM14A-208ENST00000590416 MDN1Q9NU22 5596 aa6.42□□□□□ -1.38
LSM14A-208ENST00000590416 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
LSM14A-208ENST00000590416 LCE1AQ5T7P2 110 aa6.31□□□□□ -1.4
LSM14A-208ENST00000590416 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
LSM14A-208ENST00000590416 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
LSM14A-208ENST00000590416 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
LSM14A-208ENST00000590416 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
LSM14A-208ENST00000590416 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
LSM14A-208ENST00000590416 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
LSM14A-208ENST00000590416 MT1EP04732 61 aa6.22□□□□□ -1.41
LSM14A-208ENST00000590416 SPRR2DP22532 72 aa6.21□□□□□ -1.42
LSM14A-208ENST00000590416 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
LSM14A-208ENST00000590416 ROMO1P60602 79 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms