RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 H3BPC8 53 aa8.49□□□□□ -1.05
LDLRAD4-215ENST00000590371 A8MUN3 132 aa8.46□□□□□ -1.06
LDLRAD4-215ENST00000590371 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
LDLRAD4-215ENST00000590371 FCGBPQ9Y6R7 5405 aaPredicted RBP8.44□□□□□ -1.06
LDLRAD4-215ENST00000590371 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
LDLRAD4-215ENST00000590371 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
LDLRAD4-215ENST00000590371 KRTAP19-6Q3LI70 58 aa8.4□□□□□ -1.06
LDLRAD4-215ENST00000590371 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
LDLRAD4-215ENST00000590371 SMIM20Q8N5G0 67 aa8.38□□□□□ -1.07
LDLRAD4-215ENST00000590371 NDUFC1O43677 76 aa8.37□□□□□ -1.07
LDLRAD4-215ENST00000590371 KRTAP9-7A8MTY7 169 aa8.32□□□□□ -1.08
LDLRAD4-215ENST00000590371 TRAV7A0A075B6U4 112 aa8.31□□□□□ -1.08
LDLRAD4-215ENST00000590371 H0YAA0 97 aa8.25□□□□□ -1.09
LDLRAD4-215ENST00000590371 Q5VV11 94 aa8.25□□□□□ -1.09
LDLRAD4-215ENST00000590371 DMAC1Q96GE9 116 aa8.25□□□□□ -1.09
LDLRAD4-215ENST00000590371 SPRR2GQ9BYE4 73 aa8.25□□□□□ -1.09
LDLRAD4-215ENST00000590371 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
LDLRAD4-215ENST00000590371 KRTAP19-8Q3LI54 63 aa8.18□□□□□ -1.1
LDLRAD4-215ENST00000590371 MACF1Q9UPN3 7388 aaKnown RBP8.18□□□□□ -1.1
LDLRAD4-215ENST00000590371 MT1BP07438 61 aa8.17□□□□□ -1.1
LDLRAD4-215ENST00000590371 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
LDLRAD4-215ENST00000590371 A6NN06 94 aa8.12□□□□□ -1.11
LDLRAD4-215ENST00000590371 ACYP2P14621 99 aa8.11□□□□□ -1.11
LDLRAD4-215ENST00000590371 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
LDLRAD4-215ENST00000590371 SYNE2Q8WXH0 6885 aaKnown RBP8.07□□□□□ -1.12
LDLRAD4-215ENST00000590371 C20orf197Q8N268 126 aa8.06□□□□□ -1.12
LDLRAD4-215ENST00000590371 SNURFQ9Y675 71 aa8.06□□□□□ -1.12
LDLRAD4-215ENST00000590371 SPTSSBQ8NFR3 76 aa8.03□□□□□ -1.12
LDLRAD4-215ENST00000590371 SPANXA2-OT1Q8N9U9 137 aa8.01□□□□□ -1.13
LDLRAD4-215ENST00000590371 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
LDLRAD4-215ENST00000590371 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
LDLRAD4-215ENST00000590371 R4GN34 69 aa7.94□□□□□ -1.14
LDLRAD4-215ENST00000590371 P0C880 135 aa7.93□□□□□ -1.14
LDLRAD4-215ENST00000590371 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
LDLRAD4-215ENST00000590371 COX7CP15954 63 aa7.89□□□□□ -1.15
LDLRAD4-215ENST00000590371 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
LDLRAD4-215ENST00000590371 M0QZ58 72 aa7.88□□□□□ -1.15
LDLRAD4-215ENST00000590371 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
LDLRAD4-215ENST00000590371 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
LDLRAD4-215ENST00000590371 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
LDLRAD4-215ENST00000590371 COA5Q86WW8 74 aa7.73□□□□□ -1.17
LDLRAD4-215ENST00000590371 H7BZZ5 65 aa7.72□□□□□ -1.17
LDLRAD4-215ENST00000590371 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
LDLRAD4-215ENST00000590371 MT1XP80297 61 aa7.69□□□□□ -1.18
LDLRAD4-215ENST00000590371 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
LDLRAD4-215ENST00000590371 SEC61GP60059 68 aa7.59□□□□□ -1.19
LDLRAD4-215ENST00000590371 KRTAP5-9P26371 169 aa7.58□□□□□ -1.2
LDLRAD4-215ENST00000590371 MUC12Q9UKN1 5478 aa7.56□□□□□ -1.2
LDLRAD4-215ENST00000590371 SERP1Q9Y6X1 66 aa7.56□□□□□ -1.2
LDLRAD4-215ENST00000590371 NEBP20929 6669 aa7.55□□□□□ -1.2
LDLRAD4-215ENST00000590371 CCDC179H3BU77 68 aa7.51□□□□□ -1.21
LDLRAD4-215ENST00000590371 KMT2DO14686 5537 aa7.49□□□□□ -1.21
LDLRAD4-215ENST00000590371 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
LDLRAD4-215ENST00000590371 ATP5EP56381 51 aaPredicted RBP7.48□□□□□ -1.21
LDLRAD4-215ENST00000590371 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
LDLRAD4-215ENST00000590371 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
LDLRAD4-215ENST00000590371 SPRR2FQ96RM1 72 aa7.45□□□□□ -1.22
LDLRAD4-215ENST00000590371 A0A1B0GU33 70 aa7.4□□□□□ -1.22
LDLRAD4-215ENST00000590371 MDN1Q9NU22 5596 aa7.38□□□□□ -1.23
LDLRAD4-215ENST00000590371 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
LDLRAD4-215ENST00000590371 A0A1B0GU69 56 aa7.35□□□□□ -1.23
LDLRAD4-215ENST00000590371 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
LDLRAD4-215ENST00000590371 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
LDLRAD4-215ENST00000590371 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
LDLRAD4-215ENST00000590371 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
LDLRAD4-215ENST00000590371 SPRR2EP22531 72 aa7.32□□□□□ -1.24
LDLRAD4-215ENST00000590371 SPRR2BP35325 72 aa7.32□□□□□ -1.24
LDLRAD4-215ENST00000590371 SPRR2AP35326 72 aa7.32□□□□□ -1.24
LDLRAD4-215ENST00000590371 TMEM258P61165 79 aa7.32□□□□□ -1.24
LDLRAD4-215ENST00000590371 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
LDLRAD4-215ENST00000590371 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
LDLRAD4-215ENST00000590371 A0A0D9SG42 100 aa7.29□□□□□ -1.24
LDLRAD4-215ENST00000590371 PRR15LQ9BU68 103 aa7.25□□□□□ -1.25
LDLRAD4-215ENST00000590371 SMIM26A0A096LP01 95 aa7.22□□□□□ -1.25
LDLRAD4-215ENST00000590371 SPINT4Q6UDR6 99 aa7.19□□□□□ -1.26
LDLRAD4-215ENST00000590371 LCE1AQ5T7P2 110 aa7.18□□□□□ -1.26
LDLRAD4-215ENST00000590371 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
LDLRAD4-215ENST00000590371 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.26
LDLRAD4-215ENST00000590371 KRTAP12-1P59990 96 aa7.15□□□□□ -1.26
LDLRAD4-215ENST00000590371 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.26
LDLRAD4-215ENST00000590371 SPRR2DP22532 72 aa7.08□□□□□ -1.28
LDLRAD4-215ENST00000590371 A8MU10 97 aa7.05□□□□□ -1.28
LDLRAD4-215ENST00000590371 UQCR11O14957 56 aa6.98□□□□□ -1.29
LDLRAD4-215ENST00000590371 KRTAP2-2Q9BYT5 123 aa6.93□□□□□ -1.3
LDLRAD4-215ENST00000590371 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
LDLRAD4-215ENST00000590371 V9GYY9 64 aa6.93□□□□□ -1.3
LDLRAD4-215ENST00000590371 KRTAP19-7Q3SYF9 63 aa6.86□□□□□ -1.31
LDLRAD4-215ENST00000590371 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
LDLRAD4-215ENST00000590371 Q1T7F1 81 aa6.84□□□□□ -1.31
LDLRAD4-215ENST00000590371 MT1EP04732 61 aa6.82□□□□□ -1.32
LDLRAD4-215ENST00000590371 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
LDLRAD4-215ENST00000590371 TNP1P09430 55 aa6.81□□□□□ -1.32
LDLRAD4-215ENST00000590371 C10orf95Q9H7T3 257 aa6.8□□□□□ -1.32
LDLRAD4-215ENST00000590371 PSPHP1O15172 72 aa6.77□□□□□ -1.33
LDLRAD4-215ENST00000590371 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
LDLRAD4-215ENST00000590371 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
LDLRAD4-215ENST00000590371 K7ERS5 55 aa6.73□□□□□ -1.33
LDLRAD4-215ENST00000590371 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
LDLRAD4-215ENST00000590371 PCP4P48539 62 aa6.72□□□□□ -1.33
LDLRAD4-215ENST00000590371 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms