RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
KDM4B-207ENST00000588961 Q5W150 140 aa4.85□□□□□ -1.63
KDM4B-207ENST00000588961 ACYP2P14621 99 aa4.84□□□□□ -1.63
KDM4B-207ENST00000588961 C4orf26Q17RF5 130 aa4.84□□□□□ -1.63
KDM4B-207ENST00000588961 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
KDM4B-207ENST00000588961 LPAP08519 4548 aa4.8□□□□□ -1.64
KDM4B-207ENST00000588961 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
KDM4B-207ENST00000588961 PCOTHQ58A44 107 aa4.8□□□□□ -1.64
KDM4B-207ENST00000588961 COA5Q86WW8 74 aa4.8□□□□□ -1.64
KDM4B-207ENST00000588961 DMAC1Q96GE9 116 aa4.8□□□□□ -1.64
KDM4B-207ENST00000588961 C20orf166-AS1Q96NR2 134 aa4.8□□□□□ -1.64
KDM4B-207ENST00000588961 A8MUN3 132 aa4.78□□□□□ -1.64
KDM4B-207ENST00000588961 A8MUU9 505 aa4.78□□□□□ -1.64
KDM4B-207ENST00000588961 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
KDM4B-207ENST00000588961 HRES1P13985 223 aa4.76□□□□□ -1.65
KDM4B-207ENST00000588961 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
KDM4B-207ENST00000588961 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
KDM4B-207ENST00000588961 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
KDM4B-207ENST00000588961 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
KDM4B-207ENST00000588961 LRP2P98164 4655 aa4.75□□□□□ -1.65
KDM4B-207ENST00000588961 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
KDM4B-207ENST00000588961 Q75L30 129 aa4.73□□□□□ -1.65
KDM4B-207ENST00000588961 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
KDM4B-207ENST00000588961 C9orf92A6NGG3 77 aa4.68□□□□□ -1.66
KDM4B-207ENST00000588961 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
KDM4B-207ENST00000588961 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
KDM4B-207ENST00000588961 Q5VV11 94 aa4.67□□□□□ -1.66
KDM4B-207ENST00000588961 SPTSSBQ8NFR3 76 aa4.67□□□□□ -1.66
KDM4B-207ENST00000588961 PRR15LQ9BU68 103 aa4.67□□□□□ -1.66
KDM4B-207ENST00000588961 PSPHP1O15172 72 aa4.65□□□□□ -1.67
KDM4B-207ENST00000588961 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
KDM4B-207ENST00000588961 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
KDM4B-207ENST00000588961 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
KDM4B-207ENST00000588961 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
KDM4B-207ENST00000588961 SPINK7P58062 85 aa4.61□□□□□ -1.67
KDM4B-207ENST00000588961 RPL37P61927 97 aaKnown RBP4.6□□□□□ -1.67
KDM4B-207ENST00000588961 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
KDM4B-207ENST00000588961 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
KDM4B-207ENST00000588961 A0A1B0GU69 56 aa4.57□□□□□ -1.68
KDM4B-207ENST00000588961 A6NED7 52 aa4.57□□□□□ -1.68
KDM4B-207ENST00000588961 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
KDM4B-207ENST00000588961 MUC2Q02817 5179 aa4.56□□□□□ -1.68
KDM4B-207ENST00000588961 SEC61GP60059 68 aa4.55□□□□□ -1.68
KDM4B-207ENST00000588961 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
KDM4B-207ENST00000588961 UQCR11O14957 56 aa4.52□□□□□ -1.69
KDM4B-207ENST00000588961 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
KDM4B-207ENST00000588961 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
KDM4B-207ENST00000588961 LCA10Q71F78 164 aa4.51□□□□□ -1.69
KDM4B-207ENST00000588961 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
KDM4B-207ENST00000588961 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
KDM4B-207ENST00000588961 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
KDM4B-207ENST00000588961 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
KDM4B-207ENST00000588961 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
KDM4B-207ENST00000588961 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
KDM4B-207ENST00000588961 RBM12B-AS1Q9P1G2 102 aa4.4□□□□□ -1.71
KDM4B-207ENST00000588961 A0A1B0GU33 70 aa4.39□□□□□ -1.71
KDM4B-207ENST00000588961 A6NN06 94 aa4.38□□□□□ -1.71
KDM4B-207ENST00000588961 S4R3F8 94 aa4.36□□□□□ -1.71
KDM4B-207ENST00000588961 A8MU10 97 aa4.35□□□□□ -1.71
KDM4B-207ENST00000588961 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
KDM4B-207ENST00000588961 MT1HP80294 61 aa4.33□□□□□ -1.72
KDM4B-207ENST00000588961 H0YAA0 97 aa4.32□□□□□ -1.72
KDM4B-207ENST00000588961 CSAG1Q6PB30 78 aa4.32□□□□□ -1.72
KDM4B-207ENST00000588961 K7ERS5 55 aa4.29□□□□□ -1.72
KDM4B-207ENST00000588961 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
KDM4B-207ENST00000588961 M0R2T5 61 aa4.27□□□□□ -1.73
KDM4B-207ENST00000588961 M0QZ58 72 aa4.25□□□□□ -1.73
KDM4B-207ENST00000588961 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
KDM4B-207ENST00000588961 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
KDM4B-207ENST00000588961 P0C880 135 aa4.14□□□□□ -1.75
KDM4B-207ENST00000588961 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
KDM4B-207ENST00000588961 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
KDM4B-207ENST00000588961 MT2AP02795 61 aa4.08□□□□□ -1.76
KDM4B-207ENST00000588961 ROMO1P60602 79 aa4.08□□□□□ -1.76
KDM4B-207ENST00000588961 MT1FP04733 61 aa4.05□□□□□ -1.76
KDM4B-207ENST00000588961 R4GN34 69 aa4.05□□□□□ -1.76
KDM4B-207ENST00000588961 KRTAP10-10P60014 251 aa4.04□□□□□ -1.76
KDM4B-207ENST00000588961 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
KDM4B-207ENST00000588961 A0A0D9SG42 100 aa4.02□□□□□ -1.77
KDM4B-207ENST00000588961 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
KDM4B-207ENST00000588961 PRAC1Q96KF2 57 aa4□□□□□ -1.77
KDM4B-207ENST00000588961 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
KDM4B-207ENST00000588961 KRTAP12-2P59991 146 aa3.98□□□□□ -1.77
KDM4B-207ENST00000588961 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
KDM4B-207ENST00000588961 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
KDM4B-207ENST00000588961 USH2AO75445 5202 aa3.93□□□□□ -1.78
KDM4B-207ENST00000588961 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
KDM4B-207ENST00000588961 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
KDM4B-207ENST00000588961 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
KDM4B-207ENST00000588961 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
KDM4B-207ENST00000588961 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
KDM4B-207ENST00000588961 CAMK2N1Q7Z7J9 78 aa3.8□□□□□ -1.8
KDM4B-207ENST00000588961 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
KDM4B-207ENST00000588961 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
KDM4B-207ENST00000588961 MT1BP07438 61 aa3.75□□□□□ -1.81
KDM4B-207ENST00000588961 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
KDM4B-207ENST00000588961 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
KDM4B-207ENST00000588961 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
KDM4B-207ENST00000588961 TNP1P09430 55 aa3.72□□□□□ -1.81
KDM4B-207ENST00000588961 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms