RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TMEM258P61165 79 aa6.81□□□□□ -1.32
DDX39A-208ENST00000588692 TP53AIP1Q9HCN2 124 aa6.81□□□□□ -1.32
DDX39A-208ENST00000588692 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
DDX39A-208ENST00000588692 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
DDX39A-208ENST00000588692 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
DDX39A-208ENST00000588692 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
DDX39A-208ENST00000588692 C1orf64Q8NEQ6 169 aa6.72□□□□□ -1.33
DDX39A-208ENST00000588692 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
DDX39A-208ENST00000588692 S4R3F8 94 aa6.71□□□□□ -1.34
DDX39A-208ENST00000588692 C20orf197Q8N268 126 aa6.69□□□□□ -1.34
DDX39A-208ENST00000588692 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
DDX39A-208ENST00000588692 TRAV22A0A0B4J277 110 aa6.66□□□□□ -1.34
DDX39A-208ENST00000588692 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
DDX39A-208ENST00000588692 CYSTM1Q9H1C7 97 aa6.66□□□□□ -1.34
DDX39A-208ENST00000588692 PMAIP1Q13794 54 aa6.65□□□□□ -1.35
DDX39A-208ENST00000588692 LCA10Q71F78 164 aa6.65□□□□□ -1.35
DDX39A-208ENST00000588692 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.35
DDX39A-208ENST00000588692 LOC101927531A0A1B0GV80 90 aa6.63□□□□□ -1.35
DDX39A-208ENST00000588692 NDUFC1O43677 76 aa6.63□□□□□ -1.35
DDX39A-208ENST00000588692 OCR1Q9BZK8 76 aa6.63□□□□□ -1.35
DDX39A-208ENST00000588692 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
DDX39A-208ENST00000588692 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
DDX39A-208ENST00000588692 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
DDX39A-208ENST00000588692 SNURFQ9Y675 71 aa6.6□□□□□ -1.35
DDX39A-208ENST00000588692 H7BZZ5 65 aa6.59□□□□□ -1.36
DDX39A-208ENST00000588692 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
DDX39A-208ENST00000588692 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
DDX39A-208ENST00000588692 H0Y9P7 68 aa6.53□□□□□ -1.36
DDX39A-208ENST00000588692 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
DDX39A-208ENST00000588692 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
DDX39A-208ENST00000588692 Q5VV11 94 aa6.49□□□□□ -1.37
DDX39A-208ENST00000588692 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
DDX39A-208ENST00000588692 MP68P56378 58 aa6.48□□□□□ -1.37
DDX39A-208ENST00000588692 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
DDX39A-208ENST00000588692 MT1BP07438 61 aa6.47□□□□□ -1.37
DDX39A-208ENST00000588692 H3BPC8 53 aa6.46□□□□□ -1.38
DDX39A-208ENST00000588692 CRIPTQ9P021 101 aa6.46□□□□□ -1.38
DDX39A-208ENST00000588692 A8MUN3 132 aa6.45□□□□□ -1.38
DDX39A-208ENST00000588692 A6NN06 94 aa6.42□□□□□ -1.38
DDX39A-208ENST00000588692 LINC00208Q96KT6 92 aa6.41□□□□□ -1.38
DDX39A-208ENST00000588692 H0YAA0 97 aa6.41□□□□□ -1.38
DDX39A-208ENST00000588692 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.39
DDX39A-208ENST00000588692 H3BS24 57 aa6.39□□□□□ -1.39
DDX39A-208ENST00000588692 KRTAP10-5P60370 271 aa6.34□□□□□ -1.4
DDX39A-208ENST00000588692 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.4
DDX39A-208ENST00000588692 SPANXA2-OT1Q8N9U9 137 aa6.33□□□□□ -1.4
DDX39A-208ENST00000588692 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
DDX39A-208ENST00000588692 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
DDX39A-208ENST00000588692 Q1T7F1 81 aa6.22□□□□□ -1.41
DDX39A-208ENST00000588692 R4GN34 69 aa6.16□□□□□ -1.42
DDX39A-208ENST00000588692 NEBP20929 6669 aa6.15□□□□□ -1.43
DDX39A-208ENST00000588692 P0C880 135 aa6.14□□□□□ -1.43
DDX39A-208ENST00000588692 COA5Q86WW8 74 aa6.14□□□□□ -1.43
DDX39A-208ENST00000588692 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
DDX39A-208ENST00000588692 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
DDX39A-208ENST00000588692 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
DDX39A-208ENST00000588692 M0QZ58 72 aa6.09□□□□□ -1.43
DDX39A-208ENST00000588692 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.43
DDX39A-208ENST00000588692 ACYP2P14621 99 aa6.09□□□□□ -1.44
DDX39A-208ENST00000588692 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
DDX39A-208ENST00000588692 MT1XP80297 61 aa6.07□□□□□ -1.44
DDX39A-208ENST00000588692 SPTSSBQ8NFR3 76 aa6.04□□□□□ -1.44
DDX39A-208ENST00000588692 PSPHP1O15172 72 aa6.02□□□□□ -1.44
DDX39A-208ENST00000588692 KMT2DO14686 5537 aa6.01□□□□□ -1.45
DDX39A-208ENST00000588692 PRR15LQ9BU68 103 aa6□□□□□ -1.45
DDX39A-208ENST00000588692 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
DDX39A-208ENST00000588692 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
DDX39A-208ENST00000588692 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
DDX39A-208ENST00000588692 KRTAP12-2P59991 146 aa5.96□□□□□ -1.45
DDX39A-208ENST00000588692 MDN1Q9NU22 5596 aa5.94□□□□□ -1.46
DDX39A-208ENST00000588692 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
DDX39A-208ENST00000588692 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
DDX39A-208ENST00000588692 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
DDX39A-208ENST00000588692 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
DDX39A-208ENST00000588692 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.47
DDX39A-208ENST00000588692 A6NED7 52 aa5.87□□□□□ -1.47
DDX39A-208ENST00000588692 SPRR2EP22531 72 aa5.83□□□□□ -1.48
DDX39A-208ENST00000588692 SPRR2BP35325 72 aa5.83□□□□□ -1.48
DDX39A-208ENST00000588692 SPRR2AP35326 72 aa5.83□□□□□ -1.48
DDX39A-208ENST00000588692 A0A1B0GU69 56 aa5.82□□□□□ -1.48
DDX39A-208ENST00000588692 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
DDX39A-208ENST00000588692 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
DDX39A-208ENST00000588692 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
DDX39A-208ENST00000588692 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
DDX39A-208ENST00000588692 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
DDX39A-208ENST00000588692 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
DDX39A-208ENST00000588692 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
DDX39A-208ENST00000588692 A8MU10 97 aa5.74□□□□□ -1.49
DDX39A-208ENST00000588692 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
DDX39A-208ENST00000588692 UQCR11O14957 56 aa5.69□□□□□ -1.5
DDX39A-208ENST00000588692 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
DDX39A-208ENST00000588692 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.5
DDX39A-208ENST00000588692 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.5
DDX39A-208ENST00000588692 SPRR2DP22532 72 aa5.64□□□□□ -1.51
DDX39A-208ENST00000588692 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
DDX39A-208ENST00000588692 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
DDX39A-208ENST00000588692 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
DDX39A-208ENST00000588692 A0A0D9SG42 100 aa5.55□□□□□ -1.52
DDX39A-208ENST00000588692 A0A1B0GU33 70 aa5.54□□□□□ -1.52
DDX39A-208ENST00000588692 ROMO1P60602 79 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms