RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 LCA10Q71F78 164 aa6.87□□□□□ -1.31
NLE1-205ENST00000588642 COA5Q86WW8 74 aa6.87□□□□□ -1.31
NLE1-205ENST00000588642 MT1HP80294 61 aa6.85□□□□□ -1.31
NLE1-205ENST00000588642 M0R2T5 61 aa6.83□□□□□ -1.32
NLE1-205ENST00000588642 CSAG1Q6PB30 78 aa6.81□□□□□ -1.32
NLE1-205ENST00000588642 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
NLE1-205ENST00000588642 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
NLE1-205ENST00000588642 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
NLE1-205ENST00000588642 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
NLE1-205ENST00000588642 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
NLE1-205ENST00000588642 RPS28P62857 69 aaKnown RBP6.66□□□□□ -1.34
NLE1-205ENST00000588642 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
NLE1-205ENST00000588642 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.35
NLE1-205ENST00000588642 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
NLE1-205ENST00000588642 H0YAA0 97 aa6.58□□□□□ -1.36
NLE1-205ENST00000588642 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
NLE1-205ENST00000588642 SEC61GP60059 68 aa6.57□□□□□ -1.36
NLE1-205ENST00000588642 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
NLE1-205ENST00000588642 MT2AP02795 61 aa6.54□□□□□ -1.36
NLE1-205ENST00000588642 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
NLE1-205ENST00000588642 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
NLE1-205ENST00000588642 A0A1B0GU69 56 aa6.52□□□□□ -1.37
NLE1-205ENST00000588642 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
NLE1-205ENST00000588642 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
NLE1-205ENST00000588642 V9GYY9 64 aa6.51□□□□□ -1.37
NLE1-205ENST00000588642 P0C880 135 aa6.5□□□□□ -1.37
NLE1-205ENST00000588642 MT1FP04733 61 aa6.49□□□□□ -1.37
NLE1-205ENST00000588642 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
NLE1-205ENST00000588642 Q1T7F1 81 aa6.48□□□□□ -1.37
NLE1-205ENST00000588642 PSPHP1O15172 72 aa6.4□□□□□ -1.38
NLE1-205ENST00000588642 CRIPTQ9P021 101 aa6.4□□□□□ -1.38
NLE1-205ENST00000588642 A0A1B0GU33 70 aa6.39□□□□□ -1.39
NLE1-205ENST00000588642 R4GN34 69 aa6.37□□□□□ -1.39
NLE1-205ENST00000588642 M0QZ58 72 aa6.36□□□□□ -1.39
NLE1-205ENST00000588642 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
NLE1-205ENST00000588642 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
NLE1-205ENST00000588642 Q5VV11 94 aa6.32□□□□□ -1.4
NLE1-205ENST00000588642 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
NLE1-205ENST00000588642 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
NLE1-205ENST00000588642 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
NLE1-205ENST00000588642 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
NLE1-205ENST00000588642 UQCR11O14957 56 aa6.27□□□□□ -1.41
NLE1-205ENST00000588642 LINC01554Q52M75 96 aa6.26□□□□□ -1.41
NLE1-205ENST00000588642 A6NED7 52 aa6.22□□□□□ -1.41
NLE1-205ENST00000588642 LCE2DQ5TA82 110 aaPredicted RBP6.21□□□□□ -1.42
NLE1-205ENST00000588642 A0A0D9SG42 100 aa6.2□□□□□ -1.42
NLE1-205ENST00000588642 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
NLE1-205ENST00000588642 LCE2BO14633 110 aa6.19□□□□□ -1.42
NLE1-205ENST00000588642 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
NLE1-205ENST00000588642 A8MU10 97 aa6.16□□□□□ -1.42
NLE1-205ENST00000588642 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
NLE1-205ENST00000588642 PLAC4Q8WY50 150 aa6.1□□□□□ -1.43
NLE1-205ENST00000588642 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
NLE1-205ENST00000588642 A6NN06 94 aa6.09□□□□□ -1.43
NLE1-205ENST00000588642 MT1BP07438 61 aa6.09□□□□□ -1.43
NLE1-205ENST00000588642 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
NLE1-205ENST00000588642 USH2AO75445 5202 aa6.05□□□□□ -1.44
NLE1-205ENST00000588642 CDC42SE1Q9NRR8 79 aa6.05□□□□□ -1.44
NLE1-205ENST00000588642 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
NLE1-205ENST00000588642 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
NLE1-205ENST00000588642 K7ERS5 55 aa5.99□□□□□ -1.45
NLE1-205ENST00000588642 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
NLE1-205ENST00000588642 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
NLE1-205ENST00000588642 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
NLE1-205ENST00000588642 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
NLE1-205ENST00000588642 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
NLE1-205ENST00000588642 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
NLE1-205ENST00000588642 MT1XP80297 61 aa5.84□□□□□ -1.47
NLE1-205ENST00000588642 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
NLE1-205ENST00000588642 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
NLE1-205ENST00000588642 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.7□□□□□ -1.5
NLE1-205ENST00000588642 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
NLE1-205ENST00000588642 ROMO1P60602 79 aa5.67□□□□□ -1.5
NLE1-205ENST00000588642 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
NLE1-205ENST00000588642 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
NLE1-205ENST00000588642 TNP1P09430 55 aa5.62□□□□□ -1.51
NLE1-205ENST00000588642 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
NLE1-205ENST00000588642 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
NLE1-205ENST00000588642 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
NLE1-205ENST00000588642 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
NLE1-205ENST00000588642 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
NLE1-205ENST00000588642 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
NLE1-205ENST00000588642 MACF1Q9UPN3 7388 aaKnown RBP5.43□□□□□ -1.54
NLE1-205ENST00000588642 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
NLE1-205ENST00000588642 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
NLE1-205ENST00000588642 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
NLE1-205ENST00000588642 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
NLE1-205ENST00000588642 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
NLE1-205ENST00000588642 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
NLE1-205ENST00000588642 KMT2DO14686 5537 aa5.31□□□□□ -1.56
NLE1-205ENST00000588642 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
NLE1-205ENST00000588642 KRTAP6-3Q3LI67 103 aa5.24□□□□□ -1.57
NLE1-205ENST00000588642 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
NLE1-205ENST00000588642 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
NLE1-205ENST00000588642 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
NLE1-205ENST00000588642 KRTAP5-9P26371 169 aa5.18□□□□□ -1.58
NLE1-205ENST00000588642 NEBP20929 6669 aa5.16□□□□□ -1.58
NLE1-205ENST00000588642 MT1EP04732 61 aa5.14□□□□□ -1.59
NLE1-205ENST00000588642 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.6
NLE1-205ENST00000588642 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 261.5 ms