RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 LCA10Q71F78 164 aa12.84□□□□□ -0.35
SCAMP4-210ENST00000588555 S4R3F8 94 aa12.84□□□□□ -0.35
SCAMP4-210ENST00000588555 KRTAP3-3Q9BYR6 98 aa12.81□□□□□ -0.36
SCAMP4-210ENST00000588555 SMIM26A0A096LP01 95 aa12.79□□□□□ -0.36
SCAMP4-210ENST00000588555 FLGP20930 4061 aaPredicted RBP12.77□□□□□ -0.36
SCAMP4-210ENST00000588555 LCE2CQ5TA81 110 aa12.76□□□□□ -0.37
SCAMP4-210ENST00000588555 FAT4Q6V0I7 4981 aa12.71□□□□□ -0.37
SCAMP4-210ENST00000588555 SPTSSBQ8NFR3 76 aa12.71□□□□□ -0.38
SCAMP4-210ENST00000588555 Q1T7F1 81 aa12.61□□□□□ -0.39
SCAMP4-210ENST00000588555 CSAG1Q6PB30 78 aa12.56□□□□□ -0.4
SCAMP4-210ENST00000588555 LINC01558Q9Y6Z2 57 aa12.56□□□□□ -0.4
SCAMP4-210ENST00000588555 V9GYY9 64 aa12.53□□□□□ -0.4
SCAMP4-210ENST00000588555 MT1HP80294 61 aa12.48□□□□□ -0.41
SCAMP4-210ENST00000588555 PRR15LQ9BU68 103 aa12.4□□□□□ -0.42
SCAMP4-210ENST00000588555 A0A1B0GU69 56 aa12.38□□□□□ -0.43
SCAMP4-210ENST00000588555 PSPHP1O15172 72 aa12.38□□□□□ -0.43
SCAMP4-210ENST00000588555 H0YAA0 97 aa12.32□□□□□ -0.44
SCAMP4-210ENST00000588555 SEC61GP60059 68 aa12.32□□□□□ -0.44
SCAMP4-210ENST00000588555 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
SCAMP4-210ENST00000588555 Q5VV11 94 aa12.3□□□□□ -0.44
SCAMP4-210ENST00000588555 KRTAP10-6P60371 365 aaPredicted RBP12.28□□□□□ -0.44
SCAMP4-210ENST00000588555 M0R2T5 61 aa12.28□□□□□ -0.44
SCAMP4-210ENST00000588555 ADM2Q7Z4H4 148 aa12.26□□□□□ -0.45
SCAMP4-210ENST00000588555 P0C880 135 aa12.21□□□□□ -0.45
SCAMP4-210ENST00000588555 LCE2AQ5TA79 106 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-210ENST00000588555 A0A1B0GU33 70 aa12.07□□□□□ -0.48
SCAMP4-210ENST00000588555 KRTAP9-8Q9BYQ0 159 aa12.02□□□□□ -0.49
SCAMP4-210ENST00000588555 UQCR11O14957 56 aa11.99□□□□□ -0.49
SCAMP4-210ENST00000588555 LORP23490 312 aaPredicted RBP11.99□□□□□ -0.49
SCAMP4-210ENST00000588555 A6NED7 52 aa11.98□□□□□ -0.49
SCAMP4-210ENST00000588555 MT2AP02795 61 aa11.96□□□□□ -0.49
SCAMP4-210ENST00000588555 KRTAP13-4Q3LI77 160 aa11.94□□□□□ -0.5
SCAMP4-210ENST00000588555 SPATA8Q6RVD6 105 aa11.9□□□□□ -0.51
SCAMP4-210ENST00000588555 MT1FP04733 61 aa11.89□□□□□ -0.51
SCAMP4-210ENST00000588555 M0QZ58 72 aa11.84□□□□□ -0.51
SCAMP4-210ENST00000588555 MIR22HGQ0VDD5 57 aa11.84□□□□□ -0.51
SCAMP4-210ENST00000588555 R4GN34 69 aa11.82□□□□□ -0.52
SCAMP4-210ENST00000588555 KRTAP10-10P60014 251 aa11.8□□□□□ -0.52
SCAMP4-210ENST00000588555 CRIPTQ9P021 101 aa11.8□□□□□ -0.52
SCAMP4-210ENST00000588555 CDC42SE1Q9NRR8 79 aa11.77□□□□□ -0.52
SCAMP4-210ENST00000588555 A8MU10 97 aa11.77□□□□□ -0.53
SCAMP4-210ENST00000588555 BRK1Q8WUW1 75 aa11.74□□□□□ -0.53
SCAMP4-210ENST00000588555 KRTAP19-1Q8IUB9 90 aa11.64□□□□□ -0.55
SCAMP4-210ENST00000588555 SPRR2GQ9BYE4 73 aa11.64□□□□□ -0.55
SCAMP4-210ENST00000588555 A0A0D9SG42 100 aa11.64□□□□□ -0.55
SCAMP4-210ENST00000588555 KRTAP9-3Q9BYQ3 159 aa11.59□□□□□ -0.55
SCAMP4-210ENST00000588555 LINC01554Q52M75 96 aa11.59□□□□□ -0.55
SCAMP4-210ENST00000588555 KRTAP12-1P59990 96 aa11.46□□□□□ -0.58
SCAMP4-210ENST00000588555 A6NN06 94 aa11.42□□□□□ -0.58
SCAMP4-210ENST00000588555 KRTAP12-2P59991 146 aa11.41□□□□□ -0.58
SCAMP4-210ENST00000588555 PRO0628Q9UI54 55 aa11.41□□□□□ -0.58
SCAMP4-210ENST00000588555 KRTAP19-8Q3LI54 63 aa11.36□□□□□ -0.59
SCAMP4-210ENST00000588555 SPINT4Q6UDR6 99 aa11.36□□□□□ -0.59
SCAMP4-210ENST00000588555 LCE2BO14633 110 aa11.29□□□□□ -0.6
SCAMP4-210ENST00000588555 K7ERS5 55 aa11.28□□□□□ -0.6
SCAMP4-210ENST00000588555 MT1BP07438 61 aa11.23□□□□□ -0.61
SCAMP4-210ENST00000588555 PLAC4Q8WY50 150 aa11.15□□□□□ -0.62
SCAMP4-210ENST00000588555 USH2AO75445 5202 aa11.11□□□□□ -0.63
SCAMP4-210ENST00000588555 PMAIP1Q13794 54 aa11.09□□□□□ -0.63
SCAMP4-210ENST00000588555 CAMK2N1Q7Z7J9 78 aa11.04□□□□□ -0.64
SCAMP4-210ENST00000588555 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
SCAMP4-210ENST00000588555 C10orf95Q9H7T3 257 aa10.85□□□□□ -0.67
SCAMP4-210ENST00000588555 ROMO1P60602 79 aa10.85□□□□□ -0.67
SCAMP4-210ENST00000588555 MT1XP80297 61 aa10.84□□□□□ -0.67
SCAMP4-210ENST00000588555 KRTAP10-5P60370 271 aa10.81□□□□□ -0.68
SCAMP4-210ENST00000588555 SSPOA2VEC9 5147 aa10.78□□□□□ -0.68
SCAMP4-210ENST00000588555 FSIP2Q5CZC0 6907 aa10.72□□□□□ -0.69
SCAMP4-210ENST00000588555 KRTAP9-2Q9BYQ4 174 aa10.67□□□□□ -0.7
SCAMP4-210ENST00000588555 PRO2289Q9P1D8 64 aa10.66□□□□□ -0.7
SCAMP4-210ENST00000588555 KRTAP19-6Q3LI70 58 aa10.62□□□□□ -0.71
SCAMP4-210ENST00000588555 KTN1-AS1Q86SY8 53 aa10.6□□□□□ -0.71
SCAMP4-210ENST00000588555 KRTAP25-1Q3LHN0 102 aa10.5□□□□□ -0.73
SCAMP4-210ENST00000588555 TNP1P09430 55 aa10.49□□□□□ -0.73
SCAMP4-210ENST00000588555 PRAC1Q96KF2 57 aa10.44□□□□□ -0.74
SCAMP4-210ENST00000588555 KRTAP10-7P60409 375 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-210ENST00000588555 FCGBPQ9Y6R7 5405 aaPredicted RBP10.33□□□□□ -0.76
SCAMP4-210ENST00000588555 CRCT1Q9UGL9 99 aa10.27□□□□□ -0.77
SCAMP4-210ENST00000588555 KRTAP10-12P60413 245 aa10.26□□□□□ -0.77
SCAMP4-210ENST00000588555 KRTAP23-1A1A580 65 aa10.15□□□□□ -0.78
SCAMP4-210ENST00000588555 LCE3AQ5TA76 89 aa10.12□□□□□ -0.79
SCAMP4-210ENST00000588555 PP632Q6XCG6 107 aa10.09□□□□□ -0.79
SCAMP4-210ENST00000588555 KMT2DO14686 5537 aa10.09□□□□□ -0.79
SCAMP4-210ENST00000588555 SVIPQ8NHG7 77 aa10.04□□□□□ -0.8
SCAMP4-210ENST00000588555 KRTAP4-8A0A0G2JLE6 195 aa10.02□□□□□ -0.81
SCAMP4-210ENST00000588555 KRTAP4-8Q9BYQ9 185 aa10.02□□□□□ -0.81
SCAMP4-210ENST00000588555 KRTAP8-1Q8IUC2 63 aa9.92□□□□□ -0.82
SCAMP4-210ENST00000588555 KRTAP9-6A0A140TA67 174 aa9.87□□□□□ -0.83
SCAMP4-210ENST00000588555 MACF1Q9UPN3 7388 aaKnown RBP9.83□□□□□ -0.84
SCAMP4-210ENST00000588555 KRTAP19-5Q3LI72 72 aa9.73□□□□□ -0.85
SCAMP4-210ENST00000588555 KRTAP12-3P60328 96 aa9.71□□□□□ -0.85
SCAMP4-210ENST00000588555 KRTAP19-7Q3SYF9 63 aa9.68□□□□□ -0.86
SCAMP4-210ENST00000588555 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
SCAMP4-210ENST00000588555 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.52□□□□□ -0.89
SCAMP4-210ENST00000588555 MT1EP04732 61 aa9.5□□□□□ -0.89
SCAMP4-210ENST00000588555 KRTAP15-1Q3LI76 137 aa9.47□□□□□ -0.89
SCAMP4-210ENST00000588555 SPRR2FQ96RM1 72 aa9.4□□□□□ -0.91
SCAMP4-210ENST00000588555 MUC12Q9UKN1 5478 aa9.39□□□□□ -0.91
SCAMP4-210ENST00000588555 KRTAP5-9P26371 169 aa9.38□□□□□ -0.91
SCAMP4-210ENST00000588555 MT1LQ93083 61 aa9.29□□□□□ -0.92
SCAMP4-210ENST00000588555 KRTAP6-3Q3LI67 103 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms