RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 S4R3F8 94 aa10.93□□□□□ -0.66
RBM42-203ENST00000588161 LCA10Q71F78 164 aa10.88□□□□□ -0.67
RBM42-203ENST00000588161 LCE2CQ5TA81 110 aa10.85□□□□□ -0.67
RBM42-203ENST00000588161 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
RBM42-203ENST00000588161 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
RBM42-203ENST00000588161 V9GYY9 64 aa10.8□□□□□ -0.68
RBM42-203ENST00000588161 FLGP20930 4061 aaPredicted RBP10.79□□□□□ -0.68
RBM42-203ENST00000588161 Q1T7F1 81 aa10.79□□□□□ -0.68
RBM42-203ENST00000588161 CSAG1Q6PB30 78 aa10.73□□□□□ -0.69
RBM42-203ENST00000588161 FAT4Q6V0I7 4981 aa10.69□□□□□ -0.7
RBM42-203ENST00000588161 SVIPQ8NHG7 77 aa10.68□□□□□ -0.7
RBM42-203ENST00000588161 MT1HP80294 61 aa10.65□□□□□ -0.7
RBM42-203ENST00000588161 LINC01558Q9Y6Z2 57 aa10.6□□□□□ -0.71
RBM42-203ENST00000588161 M0R2T5 61 aa10.54□□□□□ -0.72
RBM42-203ENST00000588161 SEC61GP60059 68 aa10.5□□□□□ -0.73
RBM42-203ENST00000588161 A0A1B0GU69 56 aa10.49□□□□□ -0.73
RBM42-203ENST00000588161 H0YAA0 97 aa10.49□□□□□ -0.73
RBM42-203ENST00000588161 PRO0628Q9UI54 55 aa10.47□□□□□ -0.73
RBM42-203ENST00000588161 PSPHP1O15172 72 aa10.45□□□□□ -0.74
RBM42-203ENST00000588161 PRR15LQ9BU68 103 aa10.45□□□□□ -0.74
RBM42-203ENST00000588161 Q5VV11 94 aa10.41□□□□□ -0.74
RBM42-203ENST00000588161 ADM2Q7Z4H4 148 aa10.41□□□□□ -0.74
RBM42-203ENST00000588161 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
RBM42-203ENST00000588161 BRK1Q8WUW1 75 aa10.4□□□□□ -0.75
RBM42-203ENST00000588161 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
RBM42-203ENST00000588161 KRTAP10-6P60371 365 aaPredicted RBP10.36□□□□□ -0.75
RBM42-203ENST00000588161 P0C880 135 aa10.32□□□□□ -0.76
RBM42-203ENST00000588161 A0A1B0GU33 70 aa10.23□□□□□ -0.77
RBM42-203ENST00000588161 LORP23490 312 aaPredicted RBP10.23□□□□□ -0.77
RBM42-203ENST00000588161 KRTAP9-8Q9BYQ0 159 aa10.23□□□□□ -0.77
RBM42-203ENST00000588161 A6NED7 52 aa10.19□□□□□ -0.78
RBM42-203ENST00000588161 MT2AP02795 61 aa10.18□□□□□ -0.78
RBM42-203ENST00000588161 UQCR11O14957 56 aa10.15□□□□□ -0.78
RBM42-203ENST00000588161 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
RBM42-203ENST00000588161 CRIPTQ9P021 101 aa10.11□□□□□ -0.79
RBM42-203ENST00000588161 MT1FP04733 61 aa10.11□□□□□ -0.79
RBM42-203ENST00000588161 KRTAP10-10P60014 251 aa10.11□□□□□ -0.79
RBM42-203ENST00000588161 M0QZ58 72 aa10.09□□□□□ -0.79
RBM42-203ENST00000588161 R4GN34 69 aa10.07□□□□□ -0.8
RBM42-203ENST00000588161 KRTAP13-4Q3LI77 160 aa10.04□□□□□ -0.8
RBM42-203ENST00000588161 SPATA8Q6RVD6 105 aa10.03□□□□□ -0.8
RBM42-203ENST00000588161 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
RBM42-203ENST00000588161 A8MU10 97 aa9.92□□□□□ -0.82
RBM42-203ENST00000588161 SPRR2GQ9BYE4 73 aa9.92□□□□□ -0.82
RBM42-203ENST00000588161 KRTAP19-1Q8IUB9 90 aa9.88□□□□□ -0.83
RBM42-203ENST00000588161 KRTAP9-3Q9BYQ3 159 aa9.88□□□□□ -0.83
RBM42-203ENST00000588161 PMAIP1Q13794 54 aa9.87□□□□□ -0.83
RBM42-203ENST00000588161 A0A0D9SG42 100 aa9.84□□□□□ -0.83
RBM42-203ENST00000588161 LINC01554Q52M75 96 aa9.84□□□□□ -0.83
RBM42-203ENST00000588161 A6NN06 94 aa9.75□□□□□ -0.85
RBM42-203ENST00000588161 KRTAP19-8Q3LI54 63 aa9.68□□□□□ -0.86
RBM42-203ENST00000588161 KRTAP12-1P59990 96 aa9.67□□□□□ -0.86
RBM42-203ENST00000588161 SPINT4Q6UDR6 99 aa9.64□□□□□ -0.87
RBM42-203ENST00000588161 KTN1-AS1Q86SY8 53 aa9.64□□□□□ -0.87
RBM42-203ENST00000588161 KRTAP12-2P59991 146 aa9.62□□□□□ -0.87
RBM42-203ENST00000588161 K7ERS5 55 aa9.61□□□□□ -0.87
RBM42-203ENST00000588161 LCE2BO14633 110 aa9.61□□□□□ -0.87
RBM42-203ENST00000588161 PLAC4Q8WY50 150 aa9.55□□□□□ -0.88
RBM42-203ENST00000588161 MT1BP07438 61 aa9.54□□□□□ -0.88
RBM42-203ENST00000588161 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
RBM42-203ENST00000588161 CAMK2N1Q7Z7J9 78 aa9.41□□□□□ -0.9
RBM42-203ENST00000588161 USH2AO75445 5202 aa9.35□□□□□ -0.91
RBM42-203ENST00000588161 KRTAP9-2Q9BYQ4 174 aa9.2□□□□□ -0.94
RBM42-203ENST00000588161 MT1XP80297 61 aa9.19□□□□□ -0.94
RBM42-203ENST00000588161 KRTAP10-5P60370 271 aa9.17□□□□□ -0.94
RBM42-203ENST00000588161 ROMO1P60602 79 aa9.16□□□□□ -0.94
RBM42-203ENST00000588161 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
RBM42-203ENST00000588161 PRO2289Q9P1D8 64 aa9.16□□□□□ -0.94
RBM42-203ENST00000588161 KRTAP19-6Q3LI70 58 aa9.1□□□□□ -0.95
RBM42-203ENST00000588161 PRAC1Q96KF2 57 aa9.09□□□□□ -0.95
RBM42-203ENST00000588161 SSPOA2VEC9 5147 aa9.08□□□□□ -0.96
RBM42-203ENST00000588161 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
RBM42-203ENST00000588161 TNP1P09430 55 aa8.94□□□□□ -0.98
RBM42-203ENST00000588161 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
RBM42-203ENST00000588161 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
RBM42-203ENST00000588161 KRTAP10-7P60409 375 aaPredicted RBP8.8□□□□□ -1
RBM42-203ENST00000588161 FCGBPQ9Y6R7 5405 aaPredicted RBP8.74□□□□□ -1.01
RBM42-203ENST00000588161 KRTAP10-12P60413 245 aa8.74□□□□□ -1.01
RBM42-203ENST00000588161 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.03
RBM42-203ENST00000588161 PP632Q6XCG6 107 aa8.59□□□□□ -1.03
RBM42-203ENST00000588161 LCE3AQ5TA76 89 aa8.56□□□□□ -1.04
RBM42-203ENST00000588161 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
RBM42-203ENST00000588161 KRTAP4-8A0A0G2JLE6 195 aa8.49□□□□□ -1.05
RBM42-203ENST00000588161 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
RBM42-203ENST00000588161 KMT2DO14686 5537 aa8.42□□□□□ -1.06
RBM42-203ENST00000588161 KRTAP8-1Q8IUC2 63 aa8.4□□□□□ -1.06
RBM42-203ENST00000588161 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
RBM42-203ENST00000588161 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
RBM42-203ENST00000588161 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
RBM42-203ENST00000588161 KRTAP19-7Q3SYF9 63 aa8.21□□□□□ -1.1
RBM42-203ENST00000588161 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
RBM42-203ENST00000588161 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
RBM42-203ENST00000588161 MT1EP04732 61 aa8.07□□□□□ -1.12
RBM42-203ENST00000588161 KRTAP5-9P26371 169 aa8.04□□□□□ -1.12
RBM42-203ENST00000588161 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
RBM42-203ENST00000588161 SPRR2FQ96RM1 72 aa8.04□□□□□ -1.12
RBM42-203ENST00000588161 KRTAP6-3Q3LI67 103 aa7.99□□□□□ -1.13
RBM42-203ENST00000588161 MT1LQ93083 61 aa7.89□□□□□ -1.15
RBM42-203ENST00000588161 MUC12Q9UKN1 5478 aa7.86□□□□□ -1.15
RBM42-203ENST00000588161 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms