RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 MP68P56378 58 aa2.84□□□□□ -1.95
LIG3-210ENST00000588109 ANAPC13Q9BS18 74 aa2.84□□□□□ -1.95
LIG3-210ENST00000588109 TP53AIP1Q9HCN2 124 aa2.84□□□□□ -1.95
LIG3-210ENST00000588109 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.95
LIG3-210ENST00000588109 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
LIG3-210ENST00000588109 PCOTHQ58A44 107 aa2.83□□□□□ -1.96
LIG3-210ENST00000588109 ZCCHC13Q8WW36 166 aaKnown RBP2.83□□□□□ -1.96
LIG3-210ENST00000588109 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
LIG3-210ENST00000588109 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
LIG3-210ENST00000588109 ATOX1O00244 68 aa2.81□□□□□ -1.96
LIG3-210ENST00000588109 UQCRQO14949 82 aa2.81□□□□□ -1.96
LIG3-210ENST00000588109 LRP2P98164 4655 aa2.81□□□□□ -1.96
LIG3-210ENST00000588109 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
LIG3-210ENST00000588109 TRAV22A0A0B4J277 110 aa2.8□□□□□ -1.96
LIG3-210ENST00000588109 H0Y9P7 68 aa2.8□□□□□ -1.96
LIG3-210ENST00000588109 Q5W150 140 aa2.8□□□□□ -1.96
LIG3-210ENST00000588109 TRAV7A0A075B6U4 112 aa2.79□□□□□ -1.96
LIG3-210ENST00000588109 SPINK7P58062 85 aa2.77□□□□□ -1.97
LIG3-210ENST00000588109 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
LIG3-210ENST00000588109 C7orf65Q6ZTY9 151 aa2.77□□□□□ -1.97
LIG3-210ENST00000588109 SERP2Q8N6R1 65 aa2.77□□□□□ -1.97
LIG3-210ENST00000588109 LINC00208Q96KT6 92 aa2.77□□□□□ -1.97
LIG3-210ENST00000588109 LOC101927531A0A1B0GV80 90 aa2.76□□□□□ -1.97
LIG3-210ENST00000588109 C1orf64Q8NEQ6 169 aa2.76□□□□□ -1.97
LIG3-210ENST00000588109 H3BPC8 53 aa2.75□□□□□ -1.97
LIG3-210ENST00000588109 A8MUN3 132 aa2.74□□□□□ -1.97
LIG3-210ENST00000588109 COX7CP15954 63 aa2.74□□□□□ -1.97
LIG3-210ENST00000588109 C20orf197Q8N268 126 aa2.74□□□□□ -1.97
LIG3-210ENST00000588109 CYP4F30PQ9H0H9 118 aa2.74□□□□□ -1.97
LIG3-210ENST00000588109 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
LIG3-210ENST00000588109 KRTAP4-1Q9BYQ7 146 aa2.73□□□□□ -1.97
LIG3-210ENST00000588109 SNURFQ9Y675 71 aa2.73□□□□□ -1.97
LIG3-210ENST00000588109 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
LIG3-210ENST00000588109 HRES1P13985 223 aa2.71□□□□□ -1.98
LIG3-210ENST00000588109 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
LIG3-210ENST00000588109 KLKP1Q107X0 134 aa2.7□□□□□ -1.98
LIG3-210ENST00000588109 CCDC179H3BU77 68 aa2.69□□□□□ -1.98
LIG3-210ENST00000588109 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
LIG3-210ENST00000588109 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
LIG3-210ENST00000588109 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
LIG3-210ENST00000588109 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
LIG3-210ENST00000588109 MUC2Q02817 5179 aa2.68□□□□□ -1.98
LIG3-210ENST00000588109 NDUFC1O43677 76 aa2.68□□□□□ -1.98
LIG3-210ENST00000588109 LCA10Q71F78 164 aa2.68□□□□□ -1.98
LIG3-210ENST00000588109 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
LIG3-210ENST00000588109 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
LIG3-210ENST00000588109 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.99
LIG3-210ENST00000588109 CYSTM1Q9H1C7 97 aa2.65□□□□□ -1.99
LIG3-210ENST00000588109 H7BZZ5 65 aa2.64□□□□□ -1.99
LIG3-210ENST00000588109 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
LIG3-210ENST00000588109 SPANXA2-OT1Q8N9U9 137 aa2.64□□□□□ -1.99
LIG3-210ENST00000588109 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
LIG3-210ENST00000588109 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
LIG3-210ENST00000588109 DMAC1Q96GE9 116 aa2.63□□□□□ -1.99
LIG3-210ENST00000588109 ACYP2P14621 99 aa2.62□□□□□ -1.99
LIG3-210ENST00000588109 S4R3F8 94 aa2.62□□□□□ -1.99
LIG3-210ENST00000588109 M0R2T5 61 aa2.61□□□□□ -1.99
LIG3-210ENST00000588109 CHKB-CPT1BH3BT56 60 aa2.6□□□□□ -1.99
LIG3-210ENST00000588109 K7ERS5 55 aa2.6□□□□□ -1.99
LIG3-210ENST00000588109 ATP5EP56381 51 aaPredicted RBP2.6□□□□□ -1.99
LIG3-210ENST00000588109 TMEM258P61165 79 aa2.6□□□□□ -1.99
LIG3-210ENST00000588109 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
LIG3-210ENST00000588109 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
LIG3-210ENST00000588109 MT1HP80294 61 aa2.59□□□□□ -1.99
LIG3-210ENST00000588109 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
LIG3-210ENST00000588109 A6NED7 52 aa2.58□□□□□ -2
LIG3-210ENST00000588109 CSAG1Q6PB30 78 aa2.57□□□□□ -2
LIG3-210ENST00000588109 COA5Q86WW8 74 aa2.57□□□□□ -2
LIG3-210ENST00000588109 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
LIG3-210ENST00000588109 SPTSSBQ8NFR3 76 aa2.56□□□□□ -2
LIG3-210ENST00000588109 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
LIG3-210ENST00000588109 SERP1Q9Y6X1 66 aa2.52□□□□□ -2.01
LIG3-210ENST00000588109 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
LIG3-210ENST00000588109 H0YAA0 97 aa2.47□□□□□ -2.01
LIG3-210ENST00000588109 MT2AP02795 61 aa2.47□□□□□ -2.01
LIG3-210ENST00000588109 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
LIG3-210ENST00000588109 A8MU10 97 aa2.46□□□□□ -2.02
LIG3-210ENST00000588109 A0A1B0GU69 56 aa2.45□□□□□ -2.02
LIG3-210ENST00000588109 MT1FP04733 61 aa2.45□□□□□ -2.02
LIG3-210ENST00000588109 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
LIG3-210ENST00000588109 P0C880 135 aa2.43□□□□□ -2.02
LIG3-210ENST00000588109 CRIPTQ9P021 101 aa2.42□□□□□ -2.02
LIG3-210ENST00000588109 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
LIG3-210ENST00000588109 M0QZ58 72 aa2.41□□□□□ -2.02
LIG3-210ENST00000588109 R4GN34 69 aa2.41□□□□□ -2.02
LIG3-210ENST00000588109 A6NN06 94 aa2.4□□□□□ -2.03
LIG3-210ENST00000588109 Q1T7F1 81 aa2.4□□□□□ -2.03
LIG3-210ENST00000588109 A0A1B0GU33 70 aa2.39□□□□□ -2.03
LIG3-210ENST00000588109 ROMO1P60602 79 aa2.37□□□□□ -2.03
LIG3-210ENST00000588109 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
LIG3-210ENST00000588109 SPATA8Q6RVD6 105 aa2.36□□□□□ -2.03
LIG3-210ENST00000588109 UQCR11O14957 56 aa2.35□□□□□ -2.03
LIG3-210ENST00000588109 Q5VV11 94 aa2.35□□□□□ -2.03
LIG3-210ENST00000588109 KRTAP12-2P59991 146 aa2.34□□□□□ -2.03
LIG3-210ENST00000588109 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
LIG3-210ENST00000588109 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
LIG3-210ENST00000588109 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
LIG3-210ENST00000588109 A0A0D9SG42 100 aa2.33□□□□□ -2.04
LIG3-210ENST00000588109 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
LIG3-210ENST00000588109 KRTAP5-9P26371 169 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms