RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	BIRC6	Q9NR09	4857 aa		5.26	□□□□□ -1.57
CACNA2D4-223	ENST00000588077	TYMSOS	Q8TAI1	123 aa		5.25	□□□□□ -1.57
CACNA2D4-223	ENST00000588077	APOB	P04114	4563 aa	Known RBP	5.23	□□□□□ -1.57
CACNA2D4-223	ENST00000588077	KRTAP17-1	Q9BYP8	105 aa		5.22	□□□□□ -1.57
CACNA2D4-223	ENST00000588077	KRTAP4-5	Q9BYR2	181 aa		5.22	□□□□□ -1.57
CACNA2D4-223	ENST00000588077	RYR1	P21817	5038 aa		5.21	□□□□□ -1.57
CACNA2D4-223	ENST00000588077	TPRXL	Q17RH7	258 aa		5.21	□□□□□ -1.58
CACNA2D4-223	ENST00000588077	FAT1	Q14517	4588 aa		5.2	□□□□□ -1.58
CACNA2D4-223	ENST00000588077	H1FX-AS1	Q4G0G2	97 aa		5.2	□□□□□ -1.58
CACNA2D4-223	ENST00000588077	KRTAP10-4	P60372	401 aa	Predicted RBP	5.19	□□□□□ -1.58
CACNA2D4-223	ENST00000588077	HSPG2	P98160	4391 aa		5.18	□□□□□ -1.58
CACNA2D4-223	ENST00000588077	C10orf95	Q9H7T3	257 aa		5.18	□□□□□ -1.58
CACNA2D4-223	ENST00000588077	KRTAP13-2	Q52LG2	175 aa		5.17	□□□□□ -1.58
CACNA2D4-223	ENST00000588077	SEC61B	P60468	96 aa	Known RBP	5.12	□□□□□ -1.59
CACNA2D4-223	ENST00000588077	HERC2	O95714	4834 aa		5.11	□□□□□ -1.59
CACNA2D4-223	ENST00000588077	VPS13B	Q7Z7G8	4022 aa		5.11	□□□□□ -1.59
CACNA2D4-223	ENST00000588077	KRTAP1-4	P0C5Y4	121 aa		5.09	□□□□□ -1.59
CACNA2D4-223	ENST00000588077	LCE2D	Q5TA82	110 aa	Predicted RBP	5.08	□□□□□ -1.6
CACNA2D4-223	ENST00000588077	KRTAP3-1	Q9BYR8	98 aa		5.07	□□□□□ -1.6
CACNA2D4-223	ENST00000588077	RPL37	P61927	97 aa	Known RBP	5.06	□□□□□ -1.6
CACNA2D4-223	ENST00000588077	COX6B2	Q6YFQ2	88 aa		5.05	□□□□□ -1.6
CACNA2D4-223	ENST00000588077	ABCA13	Q86UQ4	5058 aa		5.04	□□□□□ -1.6
CACNA2D4-223	ENST00000588077		A0A0D9SG42	100 aa		5.03	□□□□□ -1.6
CACNA2D4-223	ENST00000588077	C9orf92	A6NGG3	77 aa		5.02	□□□□□ -1.61
CACNA2D4-223	ENST00000588077	KRTAP10-8	P60410	259 aa		5.02	□□□□□ -1.61
CACNA2D4-223	ENST00000588077	MYCBP2	O75592	4640 aa		5.01	□□□□□ -1.61
CACNA2D4-223	ENST00000588077	MT1HL1	P0DM35	61 aa		5	□□□□□ -1.61
CACNA2D4-223	ENST00000588077	LRP1	Q07954	4544 aa	Known RBP	4.99	□□□□□ -1.61
CACNA2D4-223	ENST00000588077	PCLO	Q9Y6V0	5065 aa		4.97	□□□□□ -1.61
CACNA2D4-223	ENST00000588077	KRTAP13-4	Q3LI77	160 aa		4.95	□□□□□ -1.62
CACNA2D4-223	ENST00000588077	RPS29	P62273	56 aa	Known RBP	4.95	□□□□□ -1.62
CACNA2D4-223	ENST00000588077	FAT3	Q8TDW7	4589 aa		4.9	□□□□□ -1.62
CACNA2D4-223	ENST00000588077	PKHD1L1	Q86WI1	4243 aa		4.89	□□□□□ -1.63
CACNA2D4-223	ENST00000588077	KRTAP10-6	P60371	365 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA2D4-223	ENST00000588077		S4R3F8	94 aa		4.85	□□□□□ -1.63
CACNA2D4-223	ENST00000588077	TNXB	P22105	4242 aa		4.82	□□□□□ -1.64
CACNA2D4-223	ENST00000588077	PLAC4	Q8WY50	150 aa		4.82	□□□□□ -1.64
CACNA2D4-223	ENST00000588077	KRTAP12-2	P59991	146 aa		4.81	□□□□□ -1.64
CACNA2D4-223	ENST00000588077	LCE2C	Q5TA81	110 aa		4.81	□□□□□ -1.64
CACNA2D4-223	ENST00000588077	HERC1	Q15751	4861 aa		4.8	□□□□□ -1.64
CACNA2D4-223	ENST00000588077	XP32	Q5T750	250 aa		4.77	□□□□□ -1.65
CACNA2D4-223	ENST00000588077	CAMK2N1	Q7Z7J9	78 aa		4.74	□□□□□ -1.65
CACNA2D4-223	ENST00000588077	LCE2B	O14633	110 aa		4.74	□□□□□ -1.65
CACNA2D4-223	ENST00000588077	KRTAP12-1	P59990	96 aa		4.7	□□□□□ -1.66
CACNA2D4-223	ENST00000588077	HMCN2	Q8NDA2	5059 aa		4.66	□□□□□ -1.66
CACNA2D4-223	ENST00000588077	LCE2A	Q5TA79	106 aa	Predicted RBP	4.64	□□□□□ -1.67
CACNA2D4-223	ENST00000588077	LRP2	P98164	4655 aa		4.64	□□□□□ -1.67
CACNA2D4-223	ENST00000588077	LPA	P08519	4548 aa		4.63	□□□□□ -1.67
CACNA2D4-223	ENST00000588077	KRTAP23-1	A1A580	65 aa		4.61	□□□□□ -1.67
CACNA2D4-223	ENST00000588077	UBR4	Q5T4S7	5183 aa		4.55	□□□□□ -1.68
CACNA2D4-223	ENST00000588077	PRO2289	Q9P1D8	64 aa		4.55	□□□□□ -1.68
CACNA2D4-223	ENST00000588077		M0QZ58	72 aa		4.47	□□□□□ -1.69
CACNA2D4-223	ENST00000588077	KRTAP4-1	Q9BYQ7	146 aa		4.47	□□□□□ -1.69
CACNA2D4-223	ENST00000588077	RNF213	Q63HN8	5207 aa		4.46	□□□□□ -1.7
CACNA2D4-223	ENST00000588077		R4GN34	69 aa		4.45	□□□□□ -1.7
CACNA2D4-223	ENST00000588077	MUC2	Q02817	5179 aa		4.42	□□□□□ -1.7
CACNA2D4-223	ENST00000588077	LOR	P23490	312 aa	Predicted RBP	4.38	□□□□□ -1.71
CACNA2D4-223	ENST00000588077	PP632	Q6XCG6	107 aa		4.38	□□□□□ -1.71
CACNA2D4-223	ENST00000588077	MUC17	Q685J3	4493 aa		4.36	□□□□□ -1.71
CACNA2D4-223	ENST00000588077		M0R2T5	61 aa		4.33	□□□□□ -1.72
CACNA2D4-223	ENST00000588077	INE1	O15225	51 aa		4.31	□□□□□ -1.72
CACNA2D4-223	ENST00000588077	KRTAP19-2	Q3LHN2	52 aa		4.28	□□□□□ -1.72
CACNA2D4-223	ENST00000588077	FAT4	Q6V0I7	4981 aa		4.27	□□□□□ -1.73
CACNA2D4-223	ENST00000588077	MT1H	P80294	61 aa		4.24	□□□□□ -1.73
CACNA2D4-223	ENST00000588077	SPRR5	A0A1B0GTR4	108 aa		4.23	□□□□□ -1.73
CACNA2D4-223	ENST00000588077	FLG	P20930	4061 aa	Predicted RBP	4.12	□□□□□ -1.75
CACNA2D4-223	ENST00000588077	KRTAP10-10	P60014	251 aa		4.07	□□□□□ -1.76
CACNA2D4-223	ENST00000588077	TNP1	P09430	55 aa		4.06	□□□□□ -1.76
CACNA2D4-223	ENST00000588077	MT2A	P02795	61 aa		4.03	□□□□□ -1.76
CACNA2D4-223	ENST00000588077	KRTAP9-8	Q9BYQ0	159 aa		4.03	□□□□□ -1.76
CACNA2D4-223	ENST00000588077	MT1F	P04733	61 aa		4	□□□□□ -1.77
CACNA2D4-223	ENST00000588077	KRTAP9-2	Q9BYQ4	174 aa		3.92	□□□□□ -1.78
CACNA2D4-223	ENST00000588077	KRTAP9-3	Q9BYQ3	159 aa		3.89	□□□□□ -1.79
CACNA2D4-223	ENST00000588077	LCE3A	Q5TA76	89 aa		3.88	□□□□□ -1.79
CACNA2D4-223	ENST00000588077	FSIP2	Q5CZC0	6907 aa		3.86	□□□□□ -1.79
CACNA2D4-223	ENST00000588077	KRTAP19-1	Q8IUB9	90 aa		3.82	□□□□□ -1.8
CACNA2D4-223	ENST00000588077	SPRR2G	Q9BYE4	73 aa		3.81	□□□□□ -1.8
CACNA2D4-223	ENST00000588077	CRCT1	Q9UGL9	99 aa		3.75	□□□□□ -1.81
CACNA2D4-223	ENST00000588077	USH2A	O75445	5202 aa		3.75	□□□□□ -1.81
CACNA2D4-223	ENST00000588077	KRTAP19-8	Q3LI54	63 aa		3.73	□□□□□ -1.81
CACNA2D4-223	ENST00000588077	MT1B	P07438	61 aa		3.71	□□□□□ -1.82
CACNA2D4-223	ENST00000588077	KRTAP9-6	A0A140TA67	174 aa		3.7	□□□□□ -1.82
CACNA2D4-223	ENST00000588077	KRTAP8-1	Q8IUC2	63 aa		3.67	□□□□□ -1.82
CACNA2D4-223	ENST00000588077	SSPO	A2VEC9	5147 aa		3.66	□□□□□ -1.82
CACNA2D4-223	ENST00000588077	KRTAP12-3	P60328	96 aa		3.64	□□□□□ -1.83
CACNA2D4-223	ENST00000588077	KRTAP19-6	Q3LI70	58 aa		3.63	□□□□□ -1.83
CACNA2D4-223	ENST00000588077	KRTAP10-12	P60413	245 aa		3.63	□□□□□ -1.83
CACNA2D4-223	ENST00000588077	KRTAP10-5	P60370	271 aa		3.58	□□□□□ -1.84
CACNA2D4-223	ENST00000588077	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.57	□□□□□ -1.84
CACNA2D4-223	ENST00000588077	MT1X	P80297	61 aa		3.54	□□□□□ -1.84
CACNA2D4-223	ENST00000588077	KRTAP10-7	P60409	375 aa	Predicted RBP	3.53	□□□□□ -1.84
CACNA2D4-223	ENST00000588077	KMT2D	O14686	5537 aa		3.51	□□□□□ -1.85
CACNA2D4-223	ENST00000588077	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.46	□□□□□ -1.86
CACNA2D4-223	ENST00000588077	MACF1	Q9UPN3	7388 aa	Known RBP	3.44	□□□□□ -1.86
CACNA2D4-223	ENST00000588077	KRTAP9-6	A8MVA2	160 aa		3.43	□□□□□ -1.86
CACNA2D4-223	ENST00000588077	LCE3C	Q5T5A8	94 aa		3.42	□□□□□ -1.86
CACNA2D4-223	ENST00000588077	KRTAP19-5	Q3LI72	72 aa		3.42	□□□□□ -1.86
CACNA2D4-223	ENST00000588077	LCE4A	Q5TA78	99 aa		3.42	□□□□□ -1.86
CACNA2D4-223	ENST00000588077	SYNE2	Q8WXH0	6885 aa	Known RBP	3.38	□□□□□ -1.87
CACNA2D4-223	ENST00000588077	KRTAP9-7	A8MTY7	169 aa		3.37	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms