RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 Q5VV11 94 aa8.57□□□□□ -1.04
NFIX-209ENST00000587760 SEC61GP60059 68 aa8.55□□□□□ -1.04
NFIX-209ENST00000587760 LRP2P98164 4655 aa8.54□□□□□ -1.04
NFIX-209ENST00000587760 S4R3F8 94 aa8.54□□□□□ -1.04
NFIX-209ENST00000587760 LPAP08519 4548 aa8.51□□□□□ -1.05
NFIX-209ENST00000587760 LCA10Q71F78 164 aa8.47□□□□□ -1.05
NFIX-209ENST00000587760 A6NED7 52 aa8.44□□□□□ -1.06
NFIX-209ENST00000587760 BRK1Q8WUW1 75 aa8.41□□□□□ -1.06
NFIX-209ENST00000587760 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
NFIX-209ENST00000587760 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
NFIX-209ENST00000587760 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
NFIX-209ENST00000587760 UQCR11O14957 56 aa8.35□□□□□ -1.07
NFIX-209ENST00000587760 PRO0628Q9UI54 55 aa8.33□□□□□ -1.08
NFIX-209ENST00000587760 CDC42SE1Q9NRR8 79 aa8.32□□□□□ -1.08
NFIX-209ENST00000587760 A0A1B0GU33 70 aa8.26□□□□□ -1.09
NFIX-209ENST00000587760 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
NFIX-209ENST00000587760 KRTAP19-2Q3LHN2 52 aa8.25□□□□□ -1.09
NFIX-209ENST00000587760 H0YAA0 97 aa8.24□□□□□ -1.09
NFIX-209ENST00000587760 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
NFIX-209ENST00000587760 SPATA8Q6RVD6 105 aa8.24□□□□□ -1.09
NFIX-209ENST00000587760 HERC1Q15751 4861 aa8.24□□□□□ -1.09
NFIX-209ENST00000587760 KRTAP10-6P60371 365 aaPredicted RBP8.17□□□□□ -1.1
NFIX-209ENST00000587760 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
NFIX-209ENST00000587760 A8MU10 97 aa8.09□□□□□ -1.11
NFIX-209ENST00000587760 P0C880 135 aa8.07□□□□□ -1.12
NFIX-209ENST00000587760 M0QZ58 72 aa8.03□□□□□ -1.12
NFIX-209ENST00000587760 LCE2CQ5TA81 110 aa8□□□□□ -1.13
NFIX-209ENST00000587760 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
NFIX-209ENST00000587760 K7ERS5 55 aa7.95□□□□□ -1.14
NFIX-209ENST00000587760 KRTAP13-4Q3LI77 160 aa7.92□□□□□ -1.14
NFIX-209ENST00000587760 SVIPQ8NHG7 77 aa7.9□□□□□ -1.14
NFIX-209ENST00000587760 R4GN34 69 aa7.9□□□□□ -1.14
NFIX-209ENST00000587760 FLGP20930 4061 aaPredicted RBP7.9□□□□□ -1.14
NFIX-209ENST00000587760 M0R2T5 61 aa7.88□□□□□ -1.15
NFIX-209ENST00000587760 A6NN06 94 aa7.87□□□□□ -1.15
NFIX-209ENST00000587760 MUC2Q02817 5179 aa7.87□□□□□ -1.15
NFIX-209ENST00000587760 MT1HP80294 61 aa7.87□□□□□ -1.15
NFIX-209ENST00000587760 CRIPTQ9P021 101 aa7.87□□□□□ -1.15
NFIX-209ENST00000587760 A0A0D9SG42 100 aa7.83□□□□□ -1.16
NFIX-209ENST00000587760 UBR4Q5T4S7 5183 aa7.78□□□□□ -1.16
NFIX-209ENST00000587760 LCE2BO14633 110 aa7.78□□□□□ -1.16
NFIX-209ENST00000587760 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
NFIX-209ENST00000587760 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
NFIX-209ENST00000587760 KTN1-AS1Q86SY8 53 aa7.7□□□□□ -1.18
NFIX-209ENST00000587760 KRTAP12-1P59990 96 aa7.69□□□□□ -1.18
NFIX-209ENST00000587760 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
NFIX-209ENST00000587760 SPINT4Q6UDR6 99 aa7.68□□□□□ -1.18
NFIX-209ENST00000587760 KRTAP12-2P59991 146 aa7.64□□□□□ -1.19
NFIX-209ENST00000587760 MT2AP02795 61 aa7.59□□□□□ -1.19
NFIX-209ENST00000587760 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
NFIX-209ENST00000587760 FAT4Q6V0I7 4981 aa7.58□□□□□ -1.2
NFIX-209ENST00000587760 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
NFIX-209ENST00000587760 SPRR2GQ9BYE4 73 aa7.56□□□□□ -1.2
NFIX-209ENST00000587760 ROMO1P60602 79 aa7.55□□□□□ -1.2
NFIX-209ENST00000587760 MT1FP04733 61 aa7.52□□□□□ -1.21
NFIX-209ENST00000587760 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
NFIX-209ENST00000587760 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
NFIX-209ENST00000587760 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
NFIX-209ENST00000587760 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
NFIX-209ENST00000587760 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
NFIX-209ENST00000587760 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
NFIX-209ENST00000587760 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
NFIX-209ENST00000587760 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
NFIX-209ENST00000587760 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
NFIX-209ENST00000587760 MT1BP07438 61 aa7.17□□□□□ -1.26
NFIX-209ENST00000587760 TNP1P09430 55 aa7.11□□□□□ -1.27
NFIX-209ENST00000587760 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
NFIX-209ENST00000587760 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
NFIX-209ENST00000587760 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
NFIX-209ENST00000587760 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
NFIX-209ENST00000587760 MT1XP80297 61 aa6.97□□□□□ -1.29
NFIX-209ENST00000587760 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
NFIX-209ENST00000587760 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
NFIX-209ENST00000587760 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
NFIX-209ENST00000587760 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
NFIX-209ENST00000587760 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
NFIX-209ENST00000587760 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
NFIX-209ENST00000587760 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
NFIX-209ENST00000587760 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
NFIX-209ENST00000587760 USH2AO75445 5202 aa6.62□□□□□ -1.35
NFIX-209ENST00000587760 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
NFIX-209ENST00000587760 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
NFIX-209ENST00000587760 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
NFIX-209ENST00000587760 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
NFIX-209ENST00000587760 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
NFIX-209ENST00000587760 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
NFIX-209ENST00000587760 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
NFIX-209ENST00000587760 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
NFIX-209ENST00000587760 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
NFIX-209ENST00000587760 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
NFIX-209ENST00000587760 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
NFIX-209ENST00000587760 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
NFIX-209ENST00000587760 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
NFIX-209ENST00000587760 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
NFIX-209ENST00000587760 LUZP6Q538Z0 58 aa6.15□□□□□ -1.43
NFIX-209ENST00000587760 MT1EP04732 61 aa6.12□□□□□ -1.43
NFIX-209ENST00000587760 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
NFIX-209ENST00000587760 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
NFIX-209ENST00000587760 KMT2DO14686 5537 aa6.02□□□□□ -1.45
NFIX-209ENST00000587760 MT1LQ93083 61 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms