RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 FAT4Q6V0I7 4981 aa13.52□□□□□ -0.25
CAPNS1-204ENST00000587718 CDC42SE1Q9NRR8 79 aa13.51□□□□□ -0.25
CAPNS1-204ENST00000587718 SPTSSBQ8NFR3 76 aa13.49□□□□□ -0.25
CAPNS1-204ENST00000587718 SPINK7P58062 85 aa13.46□□□□□ -0.25
CAPNS1-204ENST00000587718 A0A1B0GU69 56 aa13.44□□□□□ -0.26
CAPNS1-204ENST00000587718 ATP11AUNQ6ZP68 121 aa13.41□□□□□ -0.26
CAPNS1-204ENST00000587718 LCA10Q71F78 164 aa13.41□□□□□ -0.26
CAPNS1-204ENST00000587718 RPL37P61927 97 aaKnown RBP13.37□□□□□ -0.27
CAPNS1-204ENST00000587718 COX6B2Q6YFQ2 88 aa13.31□□□□□ -0.28
CAPNS1-204ENST00000587718 KRTAP9-2Q9BYQ4 174 aa13.3□□□□□ -0.28
CAPNS1-204ENST00000587718 KRTAP4-1Q9BYQ7 146 aa13.28□□□□□ -0.28
CAPNS1-204ENST00000587718 KRTAP3-1Q9BYR8 98 aa13.28□□□□□ -0.28
CAPNS1-204ENST00000587718 XP32Q5T750 250 aa13.25□□□□□ -0.29
CAPNS1-204ENST00000587718 A8MU10 97 aa13.24□□□□□ -0.29
CAPNS1-204ENST00000587718 SEC61BP60468 96 aaKnown RBP13.24□□□□□ -0.29
CAPNS1-204ENST00000587718 SEC61GP60059 68 aa13.22□□□□□ -0.29
CAPNS1-204ENST00000587718 UQCR11O14957 56 aa13.2□□□□□ -0.3
CAPNS1-204ENST00000587718 SPATA8Q6RVD6 105 aa13.2□□□□□ -0.3
CAPNS1-204ENST00000587718 PMAIP1Q13794 54 aa13.17□□□□□ -0.3
CAPNS1-204ENST00000587718 MIR22HGQ0VDD5 57 aa13.07□□□□□ -0.32
CAPNS1-204ENST00000587718 A6NN06 94 aa13.06□□□□□ -0.32
CAPNS1-204ENST00000587718 LCE2CQ5TA81 110 aa12.98□□□□□ -0.33
CAPNS1-204ENST00000587718 KRTAP19-2Q3LHN2 52 aa12.96□□□□□ -0.33
CAPNS1-204ENST00000587718 KTN1-AS1Q86SY8 53 aa12.9□□□□□ -0.34
CAPNS1-204ENST00000587718 KRTAP9-6A0A140TA67 174 aa12.89□□□□□ -0.35
CAPNS1-204ENST00000587718 A0A1B0GU33 70 aa12.83□□□□□ -0.36
CAPNS1-204ENST00000587718 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
CAPNS1-204ENST00000587718 H1FX-AS1Q4G0G2 97 aa12.82□□□□□ -0.36
CAPNS1-204ENST00000587718 MT1HP80294 61 aa12.8□□□□□ -0.36
CAPNS1-204ENST00000587718 S4R3F8 94 aa12.8□□□□□ -0.36
CAPNS1-204ENST00000587718 KRTAP3-3Q9BYR6 98 aa12.78□□□□□ -0.36
CAPNS1-204ENST00000587718 H0YAA0 97 aa12.7□□□□□ -0.38
CAPNS1-204ENST00000587718 RBM12B-AS1Q9P1G2 102 aa12.7□□□□□ -0.38
CAPNS1-204ENST00000587718 LORP23490 312 aaPredicted RBP12.6□□□□□ -0.39
CAPNS1-204ENST00000587718 KRTAP10-6P60371 365 aaPredicted RBP12.56□□□□□ -0.4
CAPNS1-204ENST00000587718 FSIP2Q5CZC0 6907 aa12.55□□□□□ -0.4
CAPNS1-204ENST00000587718 CRCT1Q9UGL9 99 aa12.53□□□□□ -0.4
CAPNS1-204ENST00000587718 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.4
CAPNS1-204ENST00000587718 FLGP20930 4061 aaPredicted RBP12.5□□□□□ -0.41
CAPNS1-204ENST00000587718 CSAG1Q6PB30 78 aa12.47□□□□□ -0.41
CAPNS1-204ENST00000587718 M0R2T5 61 aa12.45□□□□□ -0.42
CAPNS1-204ENST00000587718 K7ERS5 55 aa12.44□□□□□ -0.42
CAPNS1-204ENST00000587718 ADM2Q7Z4H4 148 aa12.27□□□□□ -0.44
CAPNS1-204ENST00000587718 P0C880 135 aa12.26□□□□□ -0.45
CAPNS1-204ENST00000587718 KRTAP13-4Q3LI77 160 aa12.23□□□□□ -0.45
CAPNS1-204ENST00000587718 M0QZ58 72 aa12.21□□□□□ -0.46
CAPNS1-204ENST00000587718 PRAC1Q96KF2 57 aa12.16□□□□□ -0.46
CAPNS1-204ENST00000587718 KRTAP9-8Q9BYQ0 159 aa12.11□□□□□ -0.47
CAPNS1-204ENST00000587718 A0A0D9SG42 100 aa12.02□□□□□ -0.49
CAPNS1-204ENST00000587718 ROMO1P60602 79 aa11.99□□□□□ -0.49
CAPNS1-204ENST00000587718 USH2AO75445 5202 aa11.89□□□□□ -0.51
CAPNS1-204ENST00000587718 MT2AP02795 61 aa11.88□□□□□ -0.51
CAPNS1-204ENST00000587718 KRTAP12-1P59990 96 aa11.88□□□□□ -0.51
CAPNS1-204ENST00000587718 KRTAP25-1Q3LHN0 102 aa11.88□□□□□ -0.51
CAPNS1-204ENST00000587718 LINC01554Q52M75 96 aa11.84□□□□□ -0.51
CAPNS1-204ENST00000587718 KRTAP12-2P59991 146 aa11.83□□□□□ -0.52
CAPNS1-204ENST00000587718 SSPOA2VEC9 5147 aa11.81□□□□□ -0.52
CAPNS1-204ENST00000587718 R4GN34 69 aa11.81□□□□□ -0.52
CAPNS1-204ENST00000587718 MT1FP04733 61 aa11.79□□□□□ -0.52
CAPNS1-204ENST00000587718 SPINT4Q6UDR6 99 aa11.74□□□□□ -0.53
CAPNS1-204ENST00000587718 KRTAP9-3Q9BYQ3 159 aa11.74□□□□□ -0.53
CAPNS1-204ENST00000587718 LCE2BO14633 110 aa11.71□□□□□ -0.53
CAPNS1-204ENST00000587718 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.69□□□□□ -0.54
CAPNS1-204ENST00000587718 KRTAP10-10P60014 251 aa11.68□□□□□ -0.54
CAPNS1-204ENST00000587718 CRIPTQ9P021 101 aa11.62□□□□□ -0.55
CAPNS1-204ENST00000587718 FCGBPQ9Y6R7 5405 aaPredicted RBP11.58□□□□□ -0.56
CAPNS1-204ENST00000587718 KRTAP9-7A8MTY7 169 aa11.58□□□□□ -0.56
CAPNS1-204ENST00000587718 KRTAP19-1Q8IUB9 90 aa11.56□□□□□ -0.56
CAPNS1-204ENST00000587718 KRTAP19-6Q3LI70 58 aa11.33□□□□□ -0.6
CAPNS1-204ENST00000587718 C10orf95Q9H7T3 257 aa11.21□□□□□ -0.61
CAPNS1-204ENST00000587718 MACF1Q9UPN3 7388 aaKnown RBP11.18□□□□□ -0.62
CAPNS1-204ENST00000587718 CAMK2N1Q7Z7J9 78 aa11.13□□□□□ -0.63
CAPNS1-204ENST00000587718 SPRR2GQ9BYE4 73 aa11.11□□□□□ -0.63
CAPNS1-204ENST00000587718 SYNE2Q8WXH0 6885 aaKnown RBP11.11□□□□□ -0.63
CAPNS1-204ENST00000587718 PP632Q6XCG6 107 aa10.98□□□□□ -0.65
CAPNS1-204ENST00000587718 KRTAP6-3Q3LI67 103 aa10.88□□□□□ -0.67
CAPNS1-204ENST00000587718 PLAC4Q8WY50 150 aa10.86□□□□□ -0.67
CAPNS1-204ENST00000587718 KRTAP23-1A1A580 65 aa10.86□□□□□ -0.67
CAPNS1-204ENST00000587718 MT1BP07438 61 aa10.8□□□□□ -0.68
CAPNS1-204ENST00000587718 TNP1P09430 55 aa10.79□□□□□ -0.68
CAPNS1-204ENST00000587718 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
CAPNS1-204ENST00000587718 KRTAP15-1Q3LI76 137 aa10.69□□□□□ -0.7
CAPNS1-204ENST00000587718 KRTAP10-5P60370 271 aa10.57□□□□□ -0.72
CAPNS1-204ENST00000587718 NEBP20929 6669 aa10.45□□□□□ -0.74
CAPNS1-204ENST00000587718 MUC12Q9UKN1 5478 aa10.41□□□□□ -0.74
CAPNS1-204ENST00000587718 KRTAP5-9P26371 169 aa10.33□□□□□ -0.76
CAPNS1-204ENST00000587718 MT1XP80297 61 aa10.24□□□□□ -0.77
CAPNS1-204ENST00000587718 KMT2DO14686 5537 aa10.21□□□□□ -0.78
CAPNS1-204ENST00000587718 PRO2289Q9P1D8 64 aa10.15□□□□□ -0.78
CAPNS1-204ENST00000587718 MDN1Q9NU22 5596 aa10.13□□□□□ -0.79
CAPNS1-204ENST00000587718 KRTAP20-1Q3LI63 56 aa10.11□□□□□ -0.79
CAPNS1-204ENST00000587718 LCE3AQ5TA76 89 aa10.1□□□□□ -0.79
CAPNS1-204ENST00000587718 NDUFAF8A1L188 74 aa10.07□□□□□ -0.8
CAPNS1-204ENST00000587718 KRTAP8-1Q8IUC2 63 aa10.07□□□□□ -0.8
CAPNS1-204ENST00000587718 SPRR5A0A1B0GTR4 108 aa9.98□□□□□ -0.81
CAPNS1-204ENST00000587718 H3BS24 57 aa9.98□□□□□ -0.81
CAPNS1-204ENST00000587718 KRTAP10-12P60413 245 aa9.96□□□□□ -0.82
CAPNS1-204ENST00000587718 LUZP6Q538Z0 58 aa9.93□□□□□ -0.82
CAPNS1-204ENST00000587718 SPRR2FQ96RM1 72 aa9.91□□□□□ -0.82
CAPNS1-204ENST00000587718 KRTAP2-3P0C7H8 128 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms