RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
SDF2-204ENST00000587338 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
SDF2-204ENST00000587338 A8MUU9 505 aa4.3□□□□□ -1.72
SDF2-204ENST00000587338 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
SDF2-204ENST00000587338 C20orf166-AS1Q96NR2 134 aa4.3□□□□□ -1.72
SDF2-204ENST00000587338 FAM236DA0A1B0GTK5 79 aa4.29□□□□□ -1.72
SDF2-204ENST00000587338 H0Y9P7 68 aa4.29□□□□□ -1.72
SDF2-204ENST00000587338 FAM236CP0DP71 79 aa4.29□□□□□ -1.72
SDF2-204ENST00000587338 MP68P56378 58 aa4.29□□□□□ -1.72
SDF2-204ENST00000587338 TRAV22A0A0B4J277 110 aa4.28□□□□□ -1.72
SDF2-204ENST00000587338 COX7CP15954 63 aa4.28□□□□□ -1.72
SDF2-204ENST00000587338 C5orf47Q569G3 176 aa4.28□□□□□ -1.72
SDF2-204ENST00000587338 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
SDF2-204ENST00000587338 Q5W150 140 aa4.27□□□□□ -1.73
SDF2-204ENST00000587338 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
SDF2-204ENST00000587338 PCP4P48539 62 aa4.26□□□□□ -1.73
SDF2-204ENST00000587338 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
SDF2-204ENST00000587338 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
SDF2-204ENST00000587338 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
SDF2-204ENST00000587338 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
SDF2-204ENST00000587338 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
SDF2-204ENST00000587338 C1orf64Q8NEQ6 169 aa4.24□□□□□ -1.73
SDF2-204ENST00000587338 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
SDF2-204ENST00000587338 IGKV2-30P06310 120 aa4.23□□□□□ -1.73
SDF2-204ENST00000587338 H3BPC8 53 aa4.22□□□□□ -1.73
SDF2-204ENST00000587338 LOC101927531A0A1B0GV80 90 aa4.21□□□□□ -1.74
SDF2-204ENST00000587338 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
SDF2-204ENST00000587338 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
SDF2-204ENST00000587338 SPINK7P58062 85 aa4.18□□□□□ -1.74
SDF2-204ENST00000587338 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
SDF2-204ENST00000587338 HRES1P13985 223 aa4.17□□□□□ -1.74
SDF2-204ENST00000587338 KLKP1Q107X0 134 aa4.17□□□□□ -1.74
SDF2-204ENST00000587338 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
SDF2-204ENST00000587338 MPLKIPQ8TAP9 179 aa4.17□□□□□ -1.74
SDF2-204ENST00000587338 NDUFC1O43677 76 aa4.15□□□□□ -1.75
SDF2-204ENST00000587338 CYSTM1Q9H1C7 97 aa4.15□□□□□ -1.75
SDF2-204ENST00000587338 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
SDF2-204ENST00000587338 H7BZZ5 65 aa4.12□□□□□ -1.75
SDF2-204ENST00000587338 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
SDF2-204ENST00000587338 KMT2DO14686 5537 aa4.08□□□□□ -1.76
SDF2-204ENST00000587338 TMEM258P61165 79 aa4.07□□□□□ -1.76
SDF2-204ENST00000587338 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
SDF2-204ENST00000587338 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
SDF2-204ENST00000587338 ATP5EP56381 51 aaPredicted RBP4.04□□□□□ -1.76
SDF2-204ENST00000587338 ACYP2P14621 99 aa4.03□□□□□ -1.76
SDF2-204ENST00000587338 A6NN06 94 aa4.01□□□□□ -1.77
SDF2-204ENST00000587338 A8MUN3 132 aa4.01□□□□□ -1.77
SDF2-204ENST00000587338 DMAC1Q96GE9 116 aa4.01□□□□□ -1.77
SDF2-204ENST00000587338 CHKB-CPT1BH3BT56 60 aa4□□□□□ -1.77
SDF2-204ENST00000587338 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
SDF2-204ENST00000587338 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
SDF2-204ENST00000587338 COA5Q86WW8 74 aa3.98□□□□□ -1.77
SDF2-204ENST00000587338 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
SDF2-204ENST00000587338 SERP1Q9Y6X1 66 aa3.96□□□□□ -1.78
SDF2-204ENST00000587338 S4R3F8 94 aa3.96□□□□□ -1.78
SDF2-204ENST00000587338 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
SDF2-204ENST00000587338 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
SDF2-204ENST00000587338 LCA10Q71F78 164 aa3.92□□□□□ -1.78
SDF2-204ENST00000587338 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
SDF2-204ENST00000587338 MT1BP07438 61 aa3.9□□□□□ -1.79
SDF2-204ENST00000587338 Q5VV11 94 aa3.9□□□□□ -1.79
SDF2-204ENST00000587338 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
SDF2-204ENST00000587338 RPS28P62857 69 aaKnown RBP3.88□□□□□ -1.79
SDF2-204ENST00000587338 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
SDF2-204ENST00000587338 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
SDF2-204ENST00000587338 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
SDF2-204ENST00000587338 SPRR2EP22531 72 aa3.83□□□□□ -1.8
SDF2-204ENST00000587338 SPRR2BP35325 72 aa3.83□□□□□ -1.8
SDF2-204ENST00000587338 SPRR2AP35326 72 aa3.83□□□□□ -1.8
SDF2-204ENST00000587338 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
SDF2-204ENST00000587338 SEC61GP60059 68 aa3.81□□□□□ -1.8
SDF2-204ENST00000587338 SPRR2FQ96RM1 72 aa3.81□□□□□ -1.8
SDF2-204ENST00000587338 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
SDF2-204ENST00000587338 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
SDF2-204ENST00000587338 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
SDF2-204ENST00000587338 A0A1B0GU69 56 aa3.79□□□□□ -1.8
SDF2-204ENST00000587338 V9GYY9 64 aa3.79□□□□□ -1.8
SDF2-204ENST00000587338 ADM2Q7Z4H4 148 aa3.78□□□□□ -1.8
SDF2-204ENST00000587338 PRR15LQ9BU68 103 aa3.78□□□□□ -1.8
SDF2-204ENST00000587338 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
SDF2-204ENST00000587338 Q1T7F1 81 aa3.76□□□□□ -1.81
SDF2-204ENST00000587338 PSPHP1O15172 72 aa3.75□□□□□ -1.81
SDF2-204ENST00000587338 H0YAA0 97 aa3.71□□□□□ -1.82
SDF2-204ENST00000587338 P0C880 135 aa3.71□□□□□ -1.82
SDF2-204ENST00000587338 SPRR2DP22532 72 aa3.71□□□□□ -1.82
SDF2-204ENST00000587338 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
SDF2-204ENST00000587338 A0A1B0GU33 70 aa3.68□□□□□ -1.82
SDF2-204ENST00000587338 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
SDF2-204ENST00000587338 A6NED7 52 aa3.65□□□□□ -1.83
SDF2-204ENST00000587338 M0QZ58 72 aa3.64□□□□□ -1.83
SDF2-204ENST00000587338 UQCR11O14957 56 aa3.64□□□□□ -1.83
SDF2-204ENST00000587338 R4GN34 69 aa3.64□□□□□ -1.83
SDF2-204ENST00000587338 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
SDF2-204ENST00000587338 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
SDF2-204ENST00000587338 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
SDF2-204ENST00000587338 LINC01554Q52M75 96 aa3.61□□□□□ -1.83
SDF2-204ENST00000587338 CRIPTQ9P021 101 aa3.61□□□□□ -1.83
SDF2-204ENST00000587338 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
SDF2-204ENST00000587338 A0A0D9SG42 100 aa3.59□□□□□ -1.83
SDF2-204ENST00000587338 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms