RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 TMEM258P61165 79 aa7.48□□□□□ -1.21
NFIX-208ENST00000587260 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
NFIX-208ENST00000587260 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
NFIX-208ENST00000587260 ACYP2P14621 99 aa7.42□□□□□ -1.22
NFIX-208ENST00000587260 MT1HP80294 61 aa7.38□□□□□ -1.23
NFIX-208ENST00000587260 FLGP20930 4061 aaPredicted RBP7.35□□□□□ -1.23
NFIX-208ENST00000587260 M0R2T5 61 aa7.32□□□□□ -1.24
NFIX-208ENST00000587260 COA5Q86WW8 74 aa7.3□□□□□ -1.24
NFIX-208ENST00000587260 S4R3F8 94 aa7.3□□□□□ -1.24
NFIX-208ENST00000587260 LCA10Q71F78 164 aa7.27□□□□□ -1.25
NFIX-208ENST00000587260 SERP1Q9Y6X1 66 aa7.25□□□□□ -1.25
NFIX-208ENST00000587260 CHKB-CPT1BH3BT56 60 aa7.24□□□□□ -1.25
NFIX-208ENST00000587260 RPS28P62857 69 aaKnown RBP7.19□□□□□ -1.26
NFIX-208ENST00000587260 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
NFIX-208ENST00000587260 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
NFIX-208ENST00000587260 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
NFIX-208ENST00000587260 KRTAP9-2Q9BYQ4 174 aa7.14□□□□□ -1.27
NFIX-208ENST00000587260 H0YAA0 97 aa7.05□□□□□ -1.28
NFIX-208ENST00000587260 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
NFIX-208ENST00000587260 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
NFIX-208ENST00000587260 MT2AP02795 61 aa7.01□□□□□ -1.29
NFIX-208ENST00000587260 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
NFIX-208ENST00000587260 MT1FP04733 61 aa6.97□□□□□ -1.29
NFIX-208ENST00000587260 Q1T7F1 81 aa6.96□□□□□ -1.29
NFIX-208ENST00000587260 V9GYY9 64 aa6.96□□□□□ -1.3
NFIX-208ENST00000587260 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
NFIX-208ENST00000587260 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
NFIX-208ENST00000587260 SEC61GP60059 68 aa6.92□□□□□ -1.3
NFIX-208ENST00000587260 A0A1B0GU69 56 aa6.91□□□□□ -1.3
NFIX-208ENST00000587260 P0C880 135 aa6.88□□□□□ -1.31
NFIX-208ENST00000587260 PRR15LQ9BU68 103 aa6.87□□□□□ -1.31
NFIX-208ENST00000587260 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
NFIX-208ENST00000587260 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
NFIX-208ENST00000587260 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
NFIX-208ENST00000587260 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
NFIX-208ENST00000587260 PSPHP1O15172 72 aa6.78□□□□□ -1.32
NFIX-208ENST00000587260 A0A1B0GU33 70 aa6.77□□□□□ -1.33
NFIX-208ENST00000587260 Q5VV11 94 aa6.76□□□□□ -1.33
NFIX-208ENST00000587260 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
NFIX-208ENST00000587260 M0QZ58 72 aa6.74□□□□□ -1.33
NFIX-208ENST00000587260 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
NFIX-208ENST00000587260 R4GN34 69 aa6.71□□□□□ -1.33
NFIX-208ENST00000587260 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
NFIX-208ENST00000587260 KRTAP19-1Q8IUB9 90 aa6.7□□□□□ -1.34
NFIX-208ENST00000587260 UQCR11O14957 56 aa6.68□□□□□ -1.34
NFIX-208ENST00000587260 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
NFIX-208ENST00000587260 SPATA8Q6RVD6 105 aa6.63□□□□□ -1.35
NFIX-208ENST00000587260 USH2AO75445 5202 aa6.59□□□□□ -1.35
NFIX-208ENST00000587260 A6NED7 52 aa6.59□□□□□ -1.35
NFIX-208ENST00000587260 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
NFIX-208ENST00000587260 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
NFIX-208ENST00000587260 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
NFIX-208ENST00000587260 A6NN06 94 aa6.53□□□□□ -1.36
NFIX-208ENST00000587260 SSPOA2VEC9 5147 aa6.52□□□□□ -1.36
NFIX-208ENST00000587260 A8MU10 97 aa6.5□□□□□ -1.37
NFIX-208ENST00000587260 MT1BP07438 61 aa6.5□□□□□ -1.37
NFIX-208ENST00000587260 A0A0D9SG42 100 aa6.5□□□□□ -1.37
NFIX-208ENST00000587260 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
NFIX-208ENST00000587260 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
NFIX-208ENST00000587260 PLAC4Q8WY50 150 aa6.4□□□□□ -1.39
NFIX-208ENST00000587260 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
NFIX-208ENST00000587260 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
NFIX-208ENST00000587260 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
NFIX-208ENST00000587260 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
NFIX-208ENST00000587260 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
NFIX-208ENST00000587260 K7ERS5 55 aa6.31□□□□□ -1.4
NFIX-208ENST00000587260 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
NFIX-208ENST00000587260 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
NFIX-208ENST00000587260 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
NFIX-208ENST00000587260 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
NFIX-208ENST00000587260 MT1XP80297 61 aa6.22□□□□□ -1.41
NFIX-208ENST00000587260 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
NFIX-208ENST00000587260 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
NFIX-208ENST00000587260 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
NFIX-208ENST00000587260 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
NFIX-208ENST00000587260 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
NFIX-208ENST00000587260 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
NFIX-208ENST00000587260 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
NFIX-208ENST00000587260 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
NFIX-208ENST00000587260 SYNE2Q8WXH0 6885 aaKnown RBP6.07□□□□□ -1.44
NFIX-208ENST00000587260 ROMO1P60602 79 aa6.03□□□□□ -1.44
NFIX-208ENST00000587260 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
NFIX-208ENST00000587260 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
NFIX-208ENST00000587260 TNP1P09430 55 aa5.94□□□□□ -1.46
NFIX-208ENST00000587260 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
NFIX-208ENST00000587260 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
NFIX-208ENST00000587260 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
NFIX-208ENST00000587260 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
NFIX-208ENST00000587260 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
NFIX-208ENST00000587260 KMT2DO14686 5537 aa5.85□□□□□ -1.47
NFIX-208ENST00000587260 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
NFIX-208ENST00000587260 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
NFIX-208ENST00000587260 KRTAP8-1Q8IUC2 63 aa5.76□□□□□ -1.49
NFIX-208ENST00000587260 KTN1-AS1Q86SY8 53 aa5.72□□□□□ -1.49
NFIX-208ENST00000587260 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.49
NFIX-208ENST00000587260 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
NFIX-208ENST00000587260 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
NFIX-208ENST00000587260 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
NFIX-208ENST00000587260 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
NFIX-208ENST00000587260 KRTAP5-9P26371 169 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms