RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 C1orf64Q8NEQ6 169 aa4.3□□□□□ -1.72
VMP1-204ENST00000587259 LINC00208Q96KT6 92 aa4.3□□□□□ -1.72
VMP1-204ENST00000587259 LOC101927531A0A1B0GV80 90 aa4.29□□□□□ -1.72
VMP1-204ENST00000587259 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
VMP1-204ENST00000587259 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
VMP1-204ENST00000587259 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
VMP1-204ENST00000587259 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
VMP1-204ENST00000587259 CYSTM1Q9H1C7 97 aa4.28□□□□□ -1.72
VMP1-204ENST00000587259 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
VMP1-204ENST00000587259 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
VMP1-204ENST00000587259 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
VMP1-204ENST00000587259 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
VMP1-204ENST00000587259 MT1HP80294 61 aa4.25□□□□□ -1.73
VMP1-204ENST00000587259 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
VMP1-204ENST00000587259 C20orf166-AS1Q96NR2 134 aa4.23□□□□□ -1.73
VMP1-204ENST00000587259 CYP4F30PQ9H0H9 118 aa4.22□□□□□ -1.73
VMP1-204ENST00000587259 A8MUU9 505 aa4.21□□□□□ -1.74
VMP1-204ENST00000587259 Q5W150 140 aa4.21□□□□□ -1.74
VMP1-204ENST00000587259 Q75L30 129 aa4.21□□□□□ -1.74
VMP1-204ENST00000587259 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
VMP1-204ENST00000587259 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
VMP1-204ENST00000587259 C9orf92A6NGG3 77 aa4.19□□□□□ -1.74
VMP1-204ENST00000587259 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
VMP1-204ENST00000587259 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
VMP1-204ENST00000587259 ATP11AUNQ6ZP68 121 aa4.15□□□□□ -1.75
VMP1-204ENST00000587259 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
VMP1-204ENST00000587259 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
VMP1-204ENST00000587259 M0R2T5 61 aa4.14□□□□□ -1.75
VMP1-204ENST00000587259 A8MUN3 132 aa4.13□□□□□ -1.75
VMP1-204ENST00000587259 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
VMP1-204ENST00000587259 HRES1P13985 223 aa4.12□□□□□ -1.75
VMP1-204ENST00000587259 ACYP2P14621 99 aa4.12□□□□□ -1.75
VMP1-204ENST00000587259 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
VMP1-204ENST00000587259 V9GYY9 64 aa4.1□□□□□ -1.75
VMP1-204ENST00000587259 COX6B2Q6YFQ2 88 aa4.09□□□□□ -1.75
VMP1-204ENST00000587259 COA5Q86WW8 74 aa4.09□□□□□ -1.75
VMP1-204ENST00000587259 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
VMP1-204ENST00000587259 SPINK7P58062 85 aa4.07□□□□□ -1.76
VMP1-204ENST00000587259 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
VMP1-204ENST00000587259 Q1T7F1 81 aa4.04□□□□□ -1.76
VMP1-204ENST00000587259 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
VMP1-204ENST00000587259 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
VMP1-204ENST00000587259 C4orf26Q17RF5 130 aa4□□□□□ -1.77
VMP1-204ENST00000587259 USH2AO75445 5202 aa4□□□□□ -1.77
VMP1-204ENST00000587259 MPLKIPQ8TAP9 179 aa3.99□□□□□ -1.77
VMP1-204ENST00000587259 PRR15LQ9BU68 103 aa3.98□□□□□ -1.77
VMP1-204ENST00000587259 RBM12B-AS1Q9P1G2 102 aa3.97□□□□□ -1.77
VMP1-204ENST00000587259 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
VMP1-204ENST00000587259 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
VMP1-204ENST00000587259 SEC61GP60059 68 aa3.93□□□□□ -1.78
VMP1-204ENST00000587259 MT2AP02795 61 aa3.92□□□□□ -1.78
VMP1-204ENST00000587259 A0A1B0GU69 56 aa3.91□□□□□ -1.78
VMP1-204ENST00000587259 PSPHP1O15172 72 aa3.9□□□□□ -1.79
VMP1-204ENST00000587259 MT1FP04733 61 aa3.9□□□□□ -1.79
VMP1-204ENST00000587259 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.79
VMP1-204ENST00000587259 S4R3F8 94 aa3.89□□□□□ -1.79
VMP1-204ENST00000587259 Q5VV11 94 aa3.87□□□□□ -1.79
VMP1-204ENST00000587259 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
VMP1-204ENST00000587259 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
VMP1-204ENST00000587259 A6NED7 52 aa3.84□□□□□ -1.79
VMP1-204ENST00000587259 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
VMP1-204ENST00000587259 LCA10Q71F78 164 aa3.83□□□□□ -1.8
VMP1-204ENST00000587259 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
VMP1-204ENST00000587259 UQCR11O14957 56 aa3.82□□□□□ -1.8
VMP1-204ENST00000587259 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
VMP1-204ENST00000587259 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
VMP1-204ENST00000587259 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
VMP1-204ENST00000587259 H0YAA0 97 aa3.76□□□□□ -1.81
VMP1-204ENST00000587259 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
VMP1-204ENST00000587259 A0A1B0GU33 70 aa3.75□□□□□ -1.81
VMP1-204ENST00000587259 MIR22HGQ0VDD5 57 aa3.75□□□□□ -1.81
VMP1-204ENST00000587259 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
VMP1-204ENST00000587259 SPATA8Q6RVD6 105 aa3.73□□□□□ -1.81
VMP1-204ENST00000587259 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
VMP1-204ENST00000587259 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
VMP1-204ENST00000587259 ADM2Q7Z4H4 148 aa3.68□□□□□ -1.82
VMP1-204ENST00000587259 K7ERS5 55 aa3.67□□□□□ -1.82
VMP1-204ENST00000587259 M0QZ58 72 aa3.67□□□□□ -1.82
VMP1-204ENST00000587259 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
VMP1-204ENST00000587259 P0C880 135 aa3.62□□□□□ -1.83
VMP1-204ENST00000587259 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
VMP1-204ENST00000587259 CRIPTQ9P021 101 aa3.61□□□□□ -1.83
VMP1-204ENST00000587259 A8MU10 97 aa3.6□□□□□ -1.83
VMP1-204ENST00000587259 R4GN34 69 aa3.6□□□□□ -1.83
VMP1-204ENST00000587259 NEBP20929 6669 aa3.59□□□□□ -1.83
VMP1-204ENST00000587259 A6NN06 94 aa3.57□□□□□ -1.84
VMP1-204ENST00000587259 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
VMP1-204ENST00000587259 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
VMP1-204ENST00000587259 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
VMP1-204ENST00000587259 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
VMP1-204ENST00000587259 A0A0D9SG42 100 aa3.53□□□□□ -1.84
VMP1-204ENST00000587259 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
VMP1-204ENST00000587259 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
VMP1-204ENST00000587259 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
VMP1-204ENST00000587259 MT1BP07438 61 aa3.51□□□□□ -1.85
VMP1-204ENST00000587259 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
VMP1-204ENST00000587259 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
VMP1-204ENST00000587259 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
VMP1-204ENST00000587259 KMT2DO14686 5537 aa3.45□□□□□ -1.86
VMP1-204ENST00000587259 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms